Dothistroma septosporum      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 32 genes.  Reviewed (0 or Unreviewed (32

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Dos-0898
DOTSEDRAFT_69405
N1PVQ0
adk1
2
LLPS-Dos-0213
DOTSEDRAFT_123044
N1PUV2
DOTSEDRAFT_123044
3
LLPS-Dos-0567
DOTSEDRAFT_158709
N1PEM5
DOTSEDRAFT_158709
4
LLPS-Dos-0345
DOTSEDRAFT_167231
N1PXW6
DOTSEDRAFT_167231
5
LLPS-Dos-0453
DOTSEDRAFT_171608
N1PN06
DOTSEDRAFT_171608
6
LLPS-Dos-0587
DOTSEDRAFT_173892
M2YMM6
DOTSEDRAFT_173892
7
LLPS-Dos-0951
DOTSEDRAFT_31141
N1Q552
DOTSEDRAFT_31141
8
LLPS-Dos-0096
DOTSEDRAFT_41709
N1PUV4
DOTSEDRAFT_41709
9
LLPS-Dos-0593
DOTSEDRAFT_67450
N1PZG3
DOTSEDRAFT_67450
10
LLPS-Dos-0221
DOTSEDRAFT_69436
N1PVT2
DOTSEDRAFT_69436
11
LLPS-Dos-1586
DOTSEDRAFT_70365
N1PTR2
DOTSEDRAFT_70365
12
LLPS-Dos-0007
DOTSEDRAFT_70470
N1PVU3
DOTSEDRAFT_70470
13
LLPS-Dos-0752
DOTSEDRAFT_70590
N1PT47
DOTSEDRAFT_70590
14
LLPS-Dos-0104
DOTSEDRAFT_70593
N1PWA2
DOTSEDRAFT_70593
15
LLPS-Dos-1280
DOTSEDRAFT_70641
N1PTK2
DOTSEDRAFT_70641
16
LLPS-Dos-1545
DOTSEDRAFT_70683
N1PX48
DOTSEDRAFT_70683
17
LLPS-Dos-1593
DOTSEDRAFT_71152
N1PSI1
DOTSEDRAFT_71152
18
LLPS-Dos-0330
DOTSEDRAFT_71457
N1PTN6
DOTSEDRAFT_71457
19
LLPS-Dos-0140
DOTSEDRAFT_71515
N1PR26
DOTSEDRAFT_71515
20
LLPS-Dos-0978
DOTSEDRAFT_72098
N1PNL0
DOTSEDRAFT_72098
21
LLPS-Dos-0026
DOTSEDRAFT_72709
M2WN17
DOTSEDRAFT_72709
22
LLPS-Dos-1010
DOTSEDRAFT_72945
N1PHZ6
DOTSEDRAFT_72945
23
LLPS-Dos-0875
DOTSEDRAFT_73223
N1PJM2
DOTSEDRAFT_73223
24
LLPS-Dos-0180
DOTSEDRAFT_74025
N1PI71
DOTSEDRAFT_74025
25
LLPS-Dos-1248
DOTSEDRAFT_74129
N1PFT0
DOTSEDRAFT_74129
26
LLPS-Dos-a044
DOTSEDRAFT_74559
N1PG19
DOTSEDRAFT_74559
27
LLPS-Dos-0125
DOTSEDRAFT_74612
N1PES1
DOTSEDRAFT_74612
28
LLPS-Dos-0247
DOTSEDRAFT_75903
N1PCH3
DOTSEDRAFT_75903
29
LLPS-Dos-1145
DOTSEDRAFT_91558
N1PCT8
DOTSEDRAFT_91558
30
LLPS-Dos-0061
DOTSEDRAFT_68057
N1Q0A4
erg1
31
LLPS-Dos-0060
DOTSEDRAFT_124881
N1PUD9
LSM4
32
LLPS-Dos-1099
DOTSEDRAFT_83928
N1PCL1
pdc1