Cucumis sativus      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 36 genes.  Reviewed (0 or Unreviewed (36

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Cus-2307
Csa_1G013770
A0A0A0LPA9
Csa_1G013770
2
LLPS-Cus-1201
Csa_1G024870
A0A0A0LPN4
Csa_1G024870
3
LLPS-Cus-0634
Csa_1G042660
A0A0A0LQV5
Csa_1G042660
4
LLPS-Cus-0610
Csa_1G050340
A0A0A0LR54
Csa_1G050340
5
LLPS-Cus-0318
Csa_1G533590
A0A0A0LYC4
Csa_1G533590
6
LLPS-Cus-0904
Csa_1G714690
A0A0A0M1B5
Csa_1G714690
7
LLPS-Cus-0116
Csa_2G000020
A0A0A0LFH4
Csa_2G000020
8
LLPS-Cus-0611
Csa_2G237700
A0A0A0LP18
Csa_2G237700
9
LLPS-Cus-1472
Csa_2G247040
A0A0A0LLY1
Csa_2G247040
10
LLPS-Cus-0177
Csa_3G002510
A0A0A0L655
Csa_3G002510
11
LLPS-Cus-0650
Csa_3G122520
A0A0A0L495
Csa_3G122520
12
LLPS-Cus-0605
Csa_3G124980
A0A0A0L3R7
Csa_3G124980
13
LLPS-Cus-0443
Csa_3G183360
A0A0A0L9V7
Csa_3G183360
14
LLPS-Cus-0595
Csa_3G645950
A0A0A0LCP1
Csa_3G645950
15
LLPS-Cus-0334
Csa_3G824830
A0A0A0LCQ7
Csa_3G824830
16
LLPS-Cus-1548
Csa_3G846560
A0A0A0LIB1
Csa_3G846560
17
LLPS-Cus-0855
Csa_4G106350
A0A0A0L0N2
Csa_4G106350
18
LLPS-Cus-0135
Csa_4G192120
A0A0A0KWF0
Csa_4G192120
19
LLPS-Cus-1384
Csa_4G268000
A0A0A0L1N0
Csa_4G268000
20
LLPS-Cus-0504
Csa_4G268110
A0A0A0L0C1
Csa_4G268110
21
LLPS-Cus-1926
Csa_4G269780
A0A0A0L0D4
Csa_4G269780
22
LLPS-Cus-0523
Csa_5G180850
A0A0A0KS61
Csa_5G180850
23
LLPS-Cus-0062
Csa_5G545560
A0A0A0KUN7
Csa_5G545560
24
LLPS-Cus-1048
Csa_5G631500
A0A0A0KTZ3
Csa_5G631500
25
LLPS-Cus-1851
Csa_6G052670
A0A0A0KCI7
Csa_6G052670
26
LLPS-Cus-0794
Csa_6G078540
A0A0A0KBN0
Csa_6G078540
27
LLPS-Cus-1209
Csa_6G365730
A0A0A0KFL3
Csa_6G365730
28
LLPS-Cus-1243
Csa_6G405350
A0A0A0KHG2
Csa_6G405350
29
LLPS-Cus-1270
Csa_6G427970
A0A0A0KGY4
Csa_6G427970
30
LLPS-Cus-0050
Csa_6G453810
A0A0A0KIR2
Csa_6G453810
31
LLPS-Cus-1981
Csa_6G509630
A0A0A0KJN7
Csa_6G509630
32
LLPS-Cus-1371
Csa_6G526390
A0A0A0KII1
Csa_6G526390
33
LLPS-Cus-0944
Csa_7G070770
A0A0A0K6A8
Csa_7G070770
34
LLPS-Cus-0370
Csa_7G073530
A0A0A0K6J0
Csa_7G073530
35
LLPS-Cus-0323
Csa_7G447920
A0A0A0K6S7
Csa_7G447920
36
LLPS-Cus-0463
Csa_4G486190
A0A0A0L3Q6
LSM4