Cryptococcus neoformans      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 29 genes.  Reviewed (0 or Unreviewed (29

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Crn-1273
CNK03420
P0CO42
ADK1
2
LLPS-Crn-1361
CNA01070
Q5KPZ0
CNA01070
3
LLPS-Crn-0324
CNB01010
Q5KMP1
CNB01010
4
LLPS-Crn-0481
CNB01140
Q5KMM8
CNB01140
5
LLPS-Crn-0386
CNC00350
Q5KL89
CNC00350
6
LLPS-Crn-1265
CNC03080
Q5KKG6
CNC03080
7
LLPS-Crn-0686
CNC05360
Q5KJU2
CNC05360
8
LLPS-Crn-1056
CND01160
Q5KIZ9
CND01160
9
LLPS-Crn-0155
CND03230
Q5KIE7
CND03230
10
LLPS-Crn-0178
CND05240
Q5KHU8
CND05240
11
LLPS-Crn-0200
CND05640
Q5KHQ8
CND05640
12
LLPS-Crn-0547
CNE01010
Q5KH73
CNE01010
13
LLPS-Crn-0073
CNE03370
Q5KGJ7
CNE03370
14
LLPS-Crn-0549
CNE03720
Q5KGG3
CNE03720
15
LLPS-Crn-0576
CNE04890
Q5KG47
CNE04890
16
LLPS-Crn-1303
CNE05050
Q5KG31
CNE05050
17
LLPS-Crn-1315
CNF01540
Q5KFJ4
CNF01540
18
LLPS-Crn-0778
CNF04650
Q5KEQ4
CNF04650
19
LLPS-Crn-0236
CNG01660
Q5KE57
CNG01660
20
LLPS-Crn-0840
CNG02940
Q5KDS6
CNG02940
21
LLPS-Crn-0316
CNI00130
Q5KC60
CNI00130
22
LLPS-Crn-0258
CNK00110
Q5KA00
CNK00110
23
LLPS-Crn-0590
CNK00240
Q5K9Y7
CNK00240
24
LLPS-Crn-0074
CNM01620
Q5K7Q6
CNM01620
25
LLPS-Crn-0203
CNN01700
Q5K6Z2
CNN01700
26
LLPS-Crn-0747
CNC06460
P0CQ80
DHH1
27
LLPS-Crn-0635
CNI03970
P0CN78
GAR1
28
LLPS-Crn-0531
CNC05120
Q5KJW6
LSM4
29
LLPS-Crn-0202
CNI01160
P0CP46
PAB1