Colletotrichum graminicola      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 35 genes.  Reviewed (0 or Unreviewed (35

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Cogr-0943
GLRG_07396
E3QN14
ADK1
2
LLPS-Cogr-1499
GLRG_00082
E3Q2V9
GLRG_00082
3
LLPS-Cogr-0122
GLRG_00584
E3Q4C8
GLRG_00584
4
LLPS-Cogr-0023
GLRG_01046
E3Q5D5
GLRG_01046
5
LLPS-Cogr-0501
GLRG_01234
E3Q4S5
GLRG_01234
6
LLPS-Cogr-0211
GLRG_01260
E3Q4V1
GLRG_01260
7
LLPS-Cogr-0156
GLRG_01379
E3Q5Y7
GLRG_01379
8
LLPS-Cogr-1135
GLRG_02493
E3Q735
GLRG_02493
9
LLPS-Cogr-0002
GLRG_03253
E3QB71
GLRG_03253
10
LLPS-Cogr-0713
GLRG_03495
E3QBL2
GLRG_03495
11
LLPS-Cogr-0808
GLRG_03603
E3QC71
GLRG_03603
12
LLPS-Cogr-0707
GLRG_03798
E3QCR6
GLRG_03798
13
LLPS-Cogr-0931
GLRG_03945
E3QD29
GLRG_03945
14
LLPS-Cogr-0633
GLRG_04232
E3QE00
GLRG_04232
15
LLPS-Cogr-0721
GLRG_04491
E3QEP1
GLRG_04491
16
LLPS-Cogr-0387
GLRG_05627
E3QHZ5
GLRG_05627
17
LLPS-Cogr-0730
GLRG_06715
E3QLK2
GLRG_06715
18
LLPS-Cogr-0518
GLRG_06784
E3QLS1
GLRG_06784
19
LLPS-Cogr-1345
GLRG_06791
E3QLS8
GLRG_06791
20
LLPS-Cogr-1124
GLRG_07108
E3QM76
GLRG_07108
21
LLPS-Cogr-0154
GLRG_07855
E3QPC3
GLRG_07855
22
LLPS-Cogr-0737
GLRG_07946
E3QPM5
GLRG_07946
23
LLPS-Cogr-0292
GLRG_08090
E3QQ07
GLRG_08090
24
LLPS-Cogr-0706
GLRG_08429
E3QQZ7
GLRG_08429
25
LLPS-Cogr-0174
GLRG_08449
E3QR17
GLRG_08449
26
LLPS-Cogr-1274
GLRG_08580
E3QS13
GLRG_08580
27
LLPS-Cogr-1106
GLRG_08711
E3QRE4
GLRG_08711
28
LLPS-Cogr-0927
GLRG_08840
E3QRS3
GLRG_08840
29
LLPS-Cogr-1403
GLRG_09873
E3QV39
GLRG_09873
30
LLPS-Cogr-1202
GLRG_10195
E3QW13
GLRG_10195
31
LLPS-Cogr-1245
GLRG_10397
E3QWL5
GLRG_10397
32
LLPS-Cogr-0339
GLRG_10594
E3QX62
GLRG_10594
33
LLPS-Cogr-0047
GLRG_10607
E3QX75
GLRG_10607
34
LLPS-Cogr-0317
GLRG_10798
E3QXQ1
GLRG_10798
35
LLPS-Cogr-0537
GLRG_06158
E3QJH6
LSM4