Colletotrichum gloeosporioides      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 33 genes.  Reviewed (0 or Unreviewed (33

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Cog-0477
CGGC5_12444
L2FKM7
ADK1
2
LLPS-Cog-0611
CGGC5_10881
L2FS14
CGGC5_10881
3
LLPS-Cog-1017
CGGC5_10921
L2FQN4
CGGC5_10921
4
LLPS-Cog-1486
CGGC5_11275
L2FQM5
CGGC5_11275
5
LLPS-Cog-0582
CGGC5_11566
L2FNE5
CGGC5_11566
6
LLPS-Cog-0092
CGGC5_13709
L2FF67
CGGC5_13709
7
LLPS-Cog-0808
CGGC5_13832
L2FEZ5
CGGC5_13832
8
LLPS-Cog-0814
CGGC5_14069
L2FE74
CGGC5_14069
9
LLPS-Cog-1022
CGGC5_15336
L2GI88
CGGC5_15336
10
LLPS-Cog-0321
CGGC5_1710
L2FJ99
CGGC5_1710
11
LLPS-Cog-0495
CGGC5_1958
L2FFH1
CGGC5_1958
12
LLPS-Cog-0218
CGGC5_2114
L2FEB6
CGGC5_2114
13
LLPS-Cog-0028
CGGC5_2293
L2FD88
CGGC5_2293
14
LLPS-Cog-0287
CGGC5_2370
L2FD43
CGGC5_2370
15
LLPS-Cog-0774
CGGC5_2843
L2GHS6
CGGC5_2843
16
LLPS-Cog-0085
CGGC5_2848
L2GHT1
CGGC5_2848
17
LLPS-Cog-0075
CGGC5_2860
L2GH35
CGGC5_2860
18
LLPS-Cog-1401
CGGC5_3342
L2GGY6
CGGC5_3342
19
LLPS-Cog-0445
CGGC5_3491
L2GEM8
CGGC5_3491
20
LLPS-Cog-0053
CGGC5_3616
L2GG39
CGGC5_3616
21
LLPS-Cog-1213
CGGC5_435
L2GFK7
CGGC5_435
22
LLPS-Cog-0329
CGGC5_4586
L2GCV3
CGGC5_4586
23
LLPS-Cog-0351
CGGC5_5336
L2GA16
CGGC5_5336
24
LLPS-Cog-0096
CGGC5_6186
L2G5R8
CGGC5_6186
25
LLPS-Cog-0635
CGGC5_6788
L2G4Y4
CGGC5_6788
26
LLPS-Cog-0395
CGGC5_7098
L2G2U6
CGGC5_7098
27
LLPS-Cog-1510
CGGC5_7438
L2G399
CGGC5_7438
28
LLPS-Cog-0232
CGGC5_7850
L2G197
CGGC5_7850
29
LLPS-Cog-1522
CGGC5_7999
L2G0J8
CGGC5_7999
30
LLPS-Cog-0059
CGGC5_8617
L2FYS9
CGGC5_8617
31
LLPS-Cog-0771
CGGC5_9109
L2FX44
CGGC5_9109
32
LLPS-Cog-0447
CGGC5_9532
L2FUU4
CGGC5_9532
33
LLPS-Cog-0124
CGGC5_9958
L2FV78
CGGC5_9958