Ciona savignyi      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 43 genes.  Reviewed (0 or Unreviewed (43

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Cis-0011
ENSCSAVG00000000839.1
H2Y823
2
LLPS-Cis-0025
ENSCSAVG00000010465.1
H2ZJK9
3
LLPS-Cis-0044
ENSCSAVG00000002367.1
H2YFA0
4
LLPS-Cis-0046
ENSCSAVG00000008510.1
H2ZAC7
5
LLPS-Cis-0100
ENSCSAVG00000010599.1
H2ZK86
6
LLPS-Cis-0147
ENSCSAVG00000007421.1
H2Z4X7
7
LLPS-Cis-0246
ENSCSAVG00000008261.1
H2Z921
8
LLPS-Cis-0301
ENSCSAVG00000006355.1
H2YZS6
9
LLPS-Cis-0313
ENSCSAVG00000000472.1
H2Y680
10
LLPS-Cis-0366
ENSCSAVG00000001765.1
H2YCA2
11
LLPS-Cis-0368
ENSCSAVG00000005965.1
H2YXR2
12
LLPS-Cis-0386
ENSCSAVG00000004331.1
H2YPJ5
13
LLPS-Cis-0456
ENSCSAVG00000000476.1
H2Y690
14
LLPS-Cis-0525
ENSCSAVG00000004246.1
H2YP45
15
LLPS-Cis-0619
ENSCSAVG00000006475.1
H2Z0F7
16
LLPS-Cis-0636
ENSCSAVG00000004705.1
H2YRB9
17
LLPS-Cis-0663
ENSCSAVG00000005210.1
H2YTX7
18
LLPS-Cis-0668
ENSCSAVG00000005053.1
H2YT48
19
LLPS-Cis-0678
ENSCSAVG00000004209.1
H2YNY2
20
LLPS-Cis-0737
ENSCSAVG00000010206.1
H2ZIC2
21
LLPS-Cis-0772
ENSCSAVG00000010981.1
H2ZM70
22
LLPS-Cis-0920
ENSCSAVG00000000686.1
H2Y7D2
23
LLPS-Cis-0980
ENSCSAVG00000007968.1
H2Z7N4
24
LLPS-Cis-1071
ENSCSAVG00000001583.1
H2YBI0
25
LLPS-Cis-1146
ENSCSAVG00000010770.1
H2ZL71
26
LLPS-Cis-1169
ENSCSAVG00000010872.1
H2ZLQ3
27
LLPS-Cis-1205
ENSCSAVG00000008624.1
H2ZAY1
28
LLPS-Cis-1210
ENSCSAVG00000008044.1
H2Z804
29
LLPS-Cis-1224
ENSCSAVG00000001118.1
H2Y9C3
30
LLPS-Cis-1254
ENSCSAVG00000009895.1
H2ZGV0
31
LLPS-Cis-1256
ENSCSAVG00000007078.1
H2Z374
32
LLPS-Cis-1273
ENSCSAVG00000005086.1
H2YT99
33
LLPS-Cis-1334
ENSCSAVG00000008831.1
H2ZBU8
34
LLPS-Cis-1425
ENSCSAVG00000011798.1
H2ZR77
35
LLPS-Cis-1493
ENSCSAVG00000005528.1
H2YVL6
36
LLPS-Cis-1634
ENSCSAVG00000008334.1
H2Z9E6
37
LLPS-Cis-1711
ENSCSAVG00000009348.1
H2ZE77
38
LLPS-Cis-1751
ENSCSAVG00000006568.1
H2Z0W4
39
LLPS-Cis-1759
ENSCSAVG00000001519.1
H2YB78
40
LLPS-Cis-1797
ENSCSAVG00000005842.1
H2YX64
41
LLPS-Cis-1912
ENSCSAVG00000002057.1
H2YDR0
42
LLPS-Cis-1949
ENSCSAVG00000009700.1
H2ZFX5
43
LLPS-Cis-1988
ENSCSAVG00000004079.1
H2YND0