Brachypodium distachyon      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 37 genes.  Reviewed (0 or Unreviewed (37

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Brd-0742
BRADI_1g56090v3
A0A0Q3HCY4
100820969
2
LLPS-Brd-2134
BRADI_1g33910v3
I1GWL0
100821260
3
LLPS-Brd-0233
BRADI_2g09290v3
I1HE26
100821596
4
LLPS-Brd-1812
BRADI_4g26840v3
I1INY1
100821753
5
LLPS-Brd-1279
BRADI_2g10530v3
I1HEH4
100821914
6
LLPS-Brd-1286
BRADI_4g39600v3
I1ITE4
100822074
7
LLPS-Brd-0700
BRADI_4g06840v3
I1II82
100823193
8
LLPS-Brd-0993
BRADI_5g14750v3
I1IZB6
100823942
9
LLPS-Brd-0047
BRADI_4g08430v3
I1IIT0
100827201
10
LLPS-Brd-1954
BRADI_1g21480v3
A0A2K2DKF5
100828363
11
LLPS-Brd-1650
BRADI_4g29840v3
I1IPZ5
100829242
12
LLPS-Brd-0356
BRADI_4g15350v3
I1IKW0
100830464
13
LLPS-Brd-0052
BRADI_3g40460v3
I1I8M7
100831358
14
LLPS-Brd-0258
BRADI_2g05730v3
I1HCW3
100832120
15
LLPS-Brd-0710
BRADI_4g13640v3
I1IKC7
100833119
16
LLPS-Brd-1177
BRADI_2g26510v3
I1HJT9
100833383
17
LLPS-Brd-0638
BRADI_1g00887v3
A0A0Q3GNG3
100833436
18
LLPS-Brd-0944
BRADI_2g55351v3
A0A0Q3N202
100835393
19
LLPS-Brd-1515
BRADI_3g12030v3
I1I006
100835861
20
LLPS-Brd-1892
BRADI_2g48830v3
A0A0Q3GE91
100836644
21
LLPS-Brd-1292
BRADI_2g03940v3
A0A0Q3IR60
100837382
22
LLPS-Brd-0666
BRADI_5g27500v3
I1J3T6
100838433
23
LLPS-Brd-0103
BRADI_1g62330v3
I1H5F5
100838821
24
LLPS-Brd-0914
BRADI_4g00870v3
I1IG58
100839735
25
LLPS-Brd-2092
BRADI_4g24180v3
A0A0Q3ESF0
100840159
26
LLPS-Brd-0440
BRADI_5g17252v3
A0A0Q3E7N3
100840186
27
LLPS-Brd-1933
BRADI_3g16660v3
I1I1H0
100841250
28
LLPS-Brd-0131
BRADI_1g11640v3
I1GPA6
100843009
29
LLPS-Brd-0061
BRADI_3g30250v3
I1I573
100844693
30
LLPS-Brd-0035
BRADI_1g35630v3
I1GX63
100845669
31
LLPS-Brd-0281
BRADI_3g01310v3
I1HWA4
100845704
32
LLPS-Brd-0838
BRADI_4g38000v3
I1ISU9
100845853
33
LLPS-Brd-1884
BRADI_1g02517v3
A0A0Q3GMB1
100846038
34
LLPS-Brd-0647
BRADI_1g73110v3
I1H968
100846343
35
LLPS-Brd-0560
BRADI_1g32010v3
I1GVX9
100846789
36
LLPS-Brd-0310
BRADI_3g54700v3
I1IDP1
104583839
37
LLPS-Brd-1854
BRADI_3g19040v3
A0A2K2CY63
BRADI_3g19040v3