Aspergillus oryzae      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 33 genes.  Reviewed (0 or Unreviewed (33

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Aso-1040
AO090012001004
Q2UBH0
adk1
2
LLPS-Aso-0257
AO090001000353
Q2UNI5
AO090001000353
3
LLPS-Aso-1217
AO090001000458
Q2UN90
AO090001000458
4
LLPS-Aso-0331
AO090001000482
Q2UN71
AO090001000482
5
LLPS-Aso-0759
AO090003000285
Q2ULS7
AO090003000285
6
LLPS-Aso-1360
AO090003000467
Q2ULC1
AO090003000467
7
LLPS-Aso-0502
AO090003000491
Q2ULA0
AO090003000491
8
LLPS-Aso-0483
AO090003001114
Q2UJQ9
AO090003001114
9
LLPS-Aso-0296
AO090005001105
Q2UQU0
AO090005001105
10
LLPS-Aso-0213
AO090005001133
Q2UQR6
AO090005001133
11
LLPS-Aso-1442
AO090005001556
Q2UPQ1
AO090005001556
12
LLPS-Aso-0137
AO090005001650
Q2UPG6
AO090005001650
13
LLPS-Aso-1120
AO090009000202
Q2UUR9
AO090009000202
14
LLPS-Aso-0464
AO090009000362
Q2UUD1
AO090009000362
15
LLPS-Aso-0141
AO090009000698
Q2UTK2
AO090009000698
16
LLPS-Aso-0796
AO090010000464
Q2TWQ6
AO090010000464
17
LLPS-Aso-0703
AO090011000789
Q2TZN1
AO090011000789
18
LLPS-Aso-1022
AO090011000937
Q2TZA2
AO090011000937
19
LLPS-Aso-0539
AO090012000420
Q2UCW5
AO090012000420
20
LLPS-Aso-0161
AO090012000434
Q2UCV3
AO090012000434
21
LLPS-Aso-0049
AO090012000613
Q2UCF4
AO090012000613
22
LLPS-Aso-0108
AO090012000905
Q2UBQ8
AO090012000905
23
LLPS-Aso-1536
AO090020000050
Q2U568
AO090020000050
24
LLPS-Aso-0772
AO090120000255
Q2U6F7
AO090120000255
25
LLPS-Aso-0238
AO090120000363
Q2U665
AO090120000363
26
LLPS-Aso-0486
AO090120000481
Q2U5W7
AO090120000481
27
LLPS-Aso-0000
AO090701000693
Q2U7U9
AO090701000693
28
LLPS-Aso-0431
AO090701000760
Q2U7P2
AO090701000760
29
LLPS-Aso-1468
AO090701000767
Q2U7N6
AO090701000767
30
LLPS-Aso-0477
AO090020000013
Q2U5A2
dhh1
31
LLPS-Aso-0987
AO090026000445
Q2UEX0
LSM4
32
LLPS-Aso-0166
AO090003000927
Q2UK72
pab1
33
LLPS-Aso-1063
AO090003000661
Q2UKV4
pdcA