Aspergillus flavus      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 36 genes.  Reviewed (0 or Unreviewed (36

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Asf-1041
AFLA_022470
B8N5B9
ADK1
2
LLPS-Asf-0262
AFLA_016990
B8N6U6
AFLA_016990
3
LLPS-Asf-0431
AFLA_018700
B8N6A6
AFLA_018700
4
LLPS-Asf-0404
AFLA_021490
B8N7C7
AFLA_021490
5
LLPS-Asf-0115
AFLA_027040
B8N391
AFLA_027040
6
LLPS-Asf-0471
AFLA_028480
B8N3E5
AFLA_028480
7
LLPS-Asf-0010
AFLA_028910
B8N3I8
AFLA_028910
8
LLPS-Asf-0927
AFLA_031570
B8N3S3
AFLA_031570
9
LLPS-Asf-0178
AFLA_033270
B8N404
AFLA_033270
10
LLPS-Asf-1505
AFLA_033520
B8N429
AFLA_033520
11
LLPS-Asf-0487
AFLA_035330
B8N4C0
AFLA_035330
12
LLPS-Asf-0288
AFLA_045910
B8NBL6
AFLA_045910
13
LLPS-Asf-0776
AFLA_047300
B8NC05
AFLA_047300
14
LLPS-Asf-0041
AFLA_048030
B8NSE0
AFLA_048030
15
LLPS-Asf-0258
AFLA_048140
B8NSF1
AFLA_048140
16
LLPS-Asf-0252
AFLA_051080
B8NRW6
AFLA_051080
17
LLPS-Asf-0887
AFLA_052540
B8NS23
AFLA_052540
18
LLPS-Asf-1238
AFLA_061570
B8NFB3
AFLA_061570
19
LLPS-Asf-1465
AFLA_062190
B8NEM1
AFLA_062190
20
LLPS-Asf-1515
AFLA_062250
B8NEM7
AFLA_062250
21
LLPS-Asf-0643
AFLA_067600
B8NIH3
AFLA_067600
22
LLPS-Asf-0480
AFLA_083480
B8MZ59
AFLA_083480
23
LLPS-Asf-0396
AFLA_083750
B8MZ86
AFLA_083750
24
LLPS-Asf-1349
AFLA_087900
B8MWA0
AFLA_087900
25
LLPS-Asf-0025
AFLA_088850
B8MWT5
AFLA_088850
26
LLPS-Asf-0232
AFLA_092440
B8NLM8
AFLA_092440
27
LLPS-Asf-0113
AFLA_093470
B8NKU3
AFLA_093470
28
LLPS-Asf-1277
AFLA_094510
B8NLZ5
AFLA_094510
29
LLPS-Asf-0699
AFLA_103570
B8NV63
AFLA_103570
30
LLPS-Asf-0544
AFLA_103950
B8NVA0
AFLA_103950
31
LLPS-Asf-0673
AFLA_110550
B8N9A9
AFLA_110550
32
LLPS-Asf-0780
AFLA_119470
B8NW19
AFLA_119470
33
LLPS-Asf-0222
AFLA_127630
B8NNF2
AFLA_127630
34
LLPS-Asf-0301
AFLA_127820
B8NNH1
AFLA_127820
35
LLPS-Asf-0872
AFLA_131040
B8NFL3
AFLA_131040
36
LLPS-Asf-0573
AFLA_134870
B8NGE7
LSM4