Ashbya gossypii      Droplet


※ Droplet introduction

    Interactions between diverse synthetic, multivalent macromolecules (including multi-domain proteins and RNA) produce sharp liquid-liquid-demixing phase separations, generating micrometre-sized liquid droplets in aqueous solution (1-2). In vitro phase separation assays with purified proteins have become the standard way to investigate proteins that form membrane-less compartments. By now, various proteins have been purified and tested for their ability to phase separate and form liquid condensates in vitro (3).

References
1. Li P., Banjade S., Cheng H.C., et al. (2012) Phase transitions in the assembly of multivalent signalling proteins. Nature, 483, 336-40. PMID: 22398450
2. Kato M., Han T.W., Xie S., et al. (2012) Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels. Cell, 149, 753-67. PMID: 22579281
3. Alberti S., Saha S., Woodruff J.B., et al. (2018) A User’s Guide for Phase Separation Assays with Purified Proteins. J. Mol. Biol., 430, 4806-4820. PMID: 29944854


There are 32 genes.  Reviewed (0 or Unreviewed (32

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Asg-1224
AGOS_AGR187W
Q74ZL1
ADK1
2
LLPS-Asg-0763
AGOS_AAL139C
Q75F67
AGOS_AAL139C
3
LLPS-Asg-0861
AGOS_ABL129W
Q75E02
AGOS_ABL129W
4
LLPS-Asg-1420
AGOS_ABR099C
Q75DC8
AGOS_ABR099C
5
LLPS-Asg-0043
AGOS_ACL006W
Q75CB5
AGOS_ACL006W
6
LLPS-Asg-1470
AGOS_ACL134C
Q75CQ3
AGOS_ACL134C
7
LLPS-Asg-0302
AGOS_ACL187W
Q75CV3
AGOS_ACL187W
8
LLPS-Asg-0883
AGOS_ACR060W
Q75C56
AGOS_ACR060W
9
LLPS-Asg-0230
AGOS_ACR104C
Q75C13
AGOS_ACR104C
10
LLPS-Asg-0254
AGOS_ACR218W
Q75BQ3
AGOS_ACR218W
11
LLPS-Asg-1103
AGOS_ADL128C
Q75AP8
AGOS_ADL128C
12
LLPS-Asg-0339
AGOS_ADL166W
Q75AT6
AGOS_ADL166W
13
LLPS-Asg-0860
AGOS_ADL283W
Q75BH1
AGOS_ADL283W
14
LLPS-Asg-0099
AGOS_AEL049W
Q757R1
AGOS_AEL049W
15
LLPS-Asg-1203
AGOS_AEL230W
Q758J2
AGOS_AEL230W
16
LLPS-Asg-0992
AGOS_AER219C
Q756N5
AGOS_AER219C
17
LLPS-Asg-0114
AGOS_AFL059C
Q754X5
AGOS_AFL059C
18
LLPS-Asg-1018
AGOS_AGL145W
Q750T4
AGOS_AGL145W
19
LLPS-Asg-1232
AGOS_AGL220W
Q751C6
AGOS_AGL220W
20
LLPS-Asg-0680
AGOS_AGL349C
Q751N9
AGOS_AGL349C
21
LLPS-Asg-0477
AGOS_AGR010C
Q750E5
AGOS_AGR010C
22
LLPS-Asg-1123
AGOS_AGR390C
Q74Z16
AGOS_AGR390C
23
LLPS-Asg-0820
AGOS_AEL277C
Q758N2
ATG13
24
LLPS-Asg-0282
AGOS_ACR270W
Q75BK1
DCP2
25
LLPS-Asg-0824
AGOS_ACR197W
Q75BS4
DHH1
26
LLPS-Asg-1120
AGOS_AEL096W
Q757V8
GAR1
27
LLPS-Asg-0416
AGOS_AGL296W
Q751K2
LSM4
28
LLPS-Asg-1073
AGOS_AER214C
Q756P0
NOP1
29
LLPS-Asg-0409
AGOS_AER124W
Q756Z0
NTE1
30
LLPS-Asg-0826
AGOS_AGR122C
Q74ZS6
PAB1
31
LLPS-Asg-1230
AGOS_ADR368W
Q759A9
PYK1
32
LLPS-Asg-0034
AGOS_ADR086C
Q75A34
RPB1