Vigna radiata      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 19 genes.  Reviewed (0 or Unreviewed (19

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Vir-1400
vigra.VC1973A.gnm6.ann1.Vradi05g16930
2
LLPS-Vir-1329
vigra.VC1973A.gnm6.ann1.Vradi0134s00120
A0A1S3TAR3
LOC106753556
3
LLPS-Vir-0295
vigra.VC1973A.gnm6.ann1.Vradi02g03160
A0A1S3TKV3
LOC106756457
4
LLPS-Vir-0696
vigra.VC1973A.gnm6.ann1.Vradi03g04710
A0A1S3TNP9
LOC106757267
5
LLPS-Vir-1298
vigra.VC1973A.gnm6.ann1.Vradi03g00590
A0A1S3TQP1
LOC106757768
6
LLPS-Vir-1026
vigra.VC1973A.gnm6.ann1.Vradi04g10410
A0A1S3TRR0
LOC106758060
7
LLPS-Vir-0932
vigra.VC1973A.gnm6.ann1.Vradi05g17560
A0A1S3U8K1
LOC106762769
8
LLPS-Vir-1227
vigra.VC1973A.gnm6.ann1.Vradi06g12440
A0A1S3UBT1
LOC106763839
9
LLPS-Vir-0010
vigra.VC1973A.gnm6.ann1.Vradi06g06750
A0A1S3UC83
LOC106763965
10
LLPS-Vir-0347
vigra.VC1973A.gnm6.ann1.Vradi07g15750
A0A1S3UIF9
LOC106765642
11
LLPS-Vir-0379
vigra.VC1973A.gnm6.ann1.Vradi07g22680
A0A1S3UIT5
LOC106765678
12
LLPS-Vir-0039
vigra.VC1973A.gnm6.ann1.Vradi07g21920
A0A1S3UPJ3
LOC106767522
13
LLPS-Vir-0638
vigra.VC1973A.gnm6.ann1.Vradi08g02250
A0A1S3V696
LOC106772074
14
LLPS-Vir-0049
vigra.VC1973A.gnm6.ann1.Vradi09g01320
A0A1S3V9P9
LOC106772940
15
LLPS-Vir-1462
vigra.VC1973A.gnm6.ann1.Vradi01g06390
A0A1S3VEU7
LOC106774342
16
LLPS-Vir-0171
vigra.VC1973A.gnm6.ann1.Vradi10g03170
A0A1S3VM10
LOC106776248
17
LLPS-Vir-0512
vigra.VC1973A.gnm6.ann1.Vradi0335s00060
A0A1S3VU05
LOC106778420
18
LLPS-Vir-0217
vigra.VC1973A.gnm6.ann1.Vradi02g01610
A0A1S3VWI4
LOC106779030
19
LLPS-Vir-1412
vigra.VC1973A.gnm6.ann1.Vradi0421s00020
A0A1S3VW91
LOC106779106