Phaseolus vulgaris      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 20 genes.  Reviewed (0 or Unreviewed (20

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Phv-1029
PHAVU_001G057200g
V7CV79
PHAVU_001G057200g
2
LLPS-Phv-1483
PHAVU_001G148400g
V7CW34
PHAVU_001G148400g
3
LLPS-Phv-0758
PHAVU_001G191400g
V7CZS9
PHAVU_001G191400g
4
LLPS-Phv-1383
PHAVU_002G038500g
V7CIC1
PHAVU_002G038500g
5
LLPS-Phv-1019
PHAVU_002G222200g
V7CQP6
PHAVU_002G222200g
6
LLPS-Phv-0861
PHAVU_003G001500g
V7C4B7
PHAVU_003G001500g
7
LLPS-Phv-0995
PHAVU_003G140300g
V7CBI1
PHAVU_003G140300g
8
LLPS-Phv-0206
PHAVU_003G149400g
V7C9J1
PHAVU_003G149400g
9
LLPS-Phv-2231
PHAVU_003G184700g
V7CAS2
PHAVU_003G184700g
10
LLPS-Phv-0779
PHAVU_003G209500g
V7CBE1
PHAVU_003G209500g
11
LLPS-Phv-0624
PHAVU_005G021500g
V7BV12
PHAVU_005G021500g
12
LLPS-Phv-0941
PHAVU_006G047900g
V7BN85
PHAVU_006G047900g
13
LLPS-Phv-0108
PHAVU_006G062800g
V7BQ45
PHAVU_006G062800g
14
LLPS-Phv-1867
PHAVU_006G221600g
V7BRF8
PHAVU_006G221600g
15
LLPS-Phv-0979
PHAVU_007G255400g
V7BM15
PHAVU_007G255400g
16
LLPS-Phv-0452
PHAVU_008G016100g
T2DPE4
PHAVU_008G016100g
17
LLPS-Phv-0462
PHAVU_008G251100g
V7BC82
PHAVU_008G251100g
18
LLPS-Phv-0897
PHAVU_010G148200g
V7AU00
PHAVU_010G148200g
19
LLPS-Phv-0840
PHAVU_010G165900g
V7ARC6
PHAVU_010G165900g
20
LLPS-Phv-1214
PHAVU_011G042200g
V7AE59
PHAVU_011G042200g