Oryzias latipes      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 41 genes.  Reviewed (0 or Unreviewed (41

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Orl-2071
ENSORLG00000017922.2
H2MUG5
casp8ap2
2
LLPS-Orl-2492
ENSORLG00000019266.2
Q9DGD3
cdk1
3
LLPS-Orl-0065
ENSORLG00000015433.2
H2MKV1
cirbp
4
LLPS-Orl-3030
ENSORLG00000017269.2
H2MS70
coil
5
LLPS-Orl-0963
ENSORLG00000008949.2
H2LYK6
ddx20
6
LLPS-Orl-0082
ENSORLG00000014647.2
H2MI84
fam118b
7
LLPS-Orl-1957
ENSORLG00000013311.2
H2MDN8
fam192a
8
LLPS-Orl-0117
ENSORLG00000003405.2
H2LE67
fbl
9
LLPS-Orl-3973
ENSORLG00000009094.2
H2LZ37
fmr1
10
LLPS-Orl-2413
ENSORLG00000018776.2
A0A3B3ILJ8
gtf2f1
11
LLPS-Orl-0840
ENSORLG00000010552.2
H2M469
LOC100049345
12
LLPS-Orl-1334
ENSORLG00000008296.2
H2LWE6
LOC101155770
13
LLPS-Orl-2557
ENSORLG00000028004.1
A0A3B3I485
LOC101161750
14
LLPS-Orl-2712
ENSORLG00000024008.1
A0A3B3H2I6
LOC101162948
15
LLPS-Orl-2506
ENSORLG00000012728.3
H2MBL8
LOC101166817
16
LLPS-Orl-1341
ENSORLG00000003593.2
H2LEV4
LOC101167445
17
LLPS-Orl-0134
ENSORLG00000001642.2
A0A3B3I741
LOC101170539
18
LLPS-Orl-2297
ENSORLG00000008833.2
A0A3B3I8S8
nop56
19
LLPS-Orl-2996
ENSORLG00000003162.2
H2LDD7
nop58
20
LLPS-Orl-3798
ENSORLG00000025320.1
A0A3B3I784
p2ry12
21
LLPS-Orl-0270
ENSORLG00000008753.2
H2LXY4
polr1a
22
LLPS-Orl-2115
ENSORLG00000018778.2
A0A3B3H6M4
psme3
23
LLPS-Orl-1782
ENSORLG00000001398.2
H2L7C3
ruvbl1
24
LLPS-Orl-1845
ENSORLG00000012078.2
H2M9D6
ruvbl2
25
LLPS-Orl-1316
ENSORLG00000006895.2
A0A3B3H4R2
sart3
26
LLPS-Orl-2835
ENSORLG00000029570.1
A0A3B3HGZ3
slc39a1
27
LLPS-Orl-2306
ENSORLG00000019421.2
H2MYS1
snrpb2
28
LLPS-Orl-1254
ENSORLG00000012516.2
H2MAW0
snrpd1
29
LLPS-Orl-0957
ENSORLG00000012059.2
A0A3B3HBG9
snrpe
30
LLPS-Orl-0980
ENSORLG00000025456.1
A0A3B3HE62
snrpg
31
LLPS-Orl-1797
ENSORLG00000020484.2
A0A3B3H4H7
spopl
32
LLPS-Orl-1576
ENSORLG00000000622.2
C9E6G0
SUMO1
33
LLPS-Orl-1299
ENSORLG00000013929.2
Q1PS67
tert
34
LLPS-Orl-1880
ENSORLG00000012609.2
H2MB71
toe1
35
LLPS-Orl-2859
ENSORLG00000002593.3
H2LBF9
ubtf
36
LLPS-Orl-1308
ENSORLG00000003406.2
H2LE66
uspl1
37
LLPS-Orl-2642
ENSORLG00000010872.2
H2M5B0
vrk1
38
LLPS-Orl-2620
ENSORLG00000022818.1
A0A3B3HYR5
wrap53
39
LLPS-Orl-1337
ENSORLG00000004225.2
Q8AXS2
yb1
40
LLPS-Orl-4057
ENSORLG00000000880.3
H2L5J8
zgpat
41
LLPS-Orl-1242
ENSORLG00000000804.2
H2L5B7
znf277