Oryza sativa      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 18 genes.  Reviewed (0 or Unreviewed (18

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Ors-1165
Os03g0350100
Q10LH5
LOC_Os03g22730
2
LLPS-Ors-0066
Os03g0352300
Q10LF8
LOC_Os03g22880
3
LLPS-Ors-0975
Os12g0613500
Q2QM87
LOC_Os12g41930
4
LLPS-Ors-0662
Os01g0916600
Q7F2X8
Os01g0916600
5
LLPS-Ors-1052
Os02g0126700
Q6Z2M5
Os02g0126700
6
LLPS-Ors-2197
Os02g0258200
A0A0P0VHG2
Os02g0258200
7
LLPS-Ors-1267
Os02g0295700
Q6K5B7
Os02g0295700
8
LLPS-Ors-0439
Os02g0586500
Q6YY16
Os02g0586500
9
LLPS-Ors-2041
Os02g0793000
Q6K687
Os02g0793000
10
LLPS-Ors-1204
Os02g0821800
A0A0N7KGC5
Os02g0821800
11
LLPS-Ors-1073
Os03g0298800
Q10MR0
Os03g0298800
12
LLPS-Ors-1088
Os03g0738000
Q0DNR7
Os03g0738000
13
LLPS-Ors-1616
Os03g0858100
Q84M87
Os03g0858100
14
LLPS-Ors-0205
Os06g0186900
Q5SMU8
Os06g0186900
15
LLPS-Ors-0339
Os07g0178900
B7FAF4
Os07g0178900
16
LLPS-Ors-1675
Os07g0608700
Q6YTY0
Os07g0608700
17
LLPS-Ors-1362
Os08g0113200
Q6ZCC0
Os08g0113200
18
LLPS-Ors-2127
Os08g0226800
A0A0P0XDJ3
Os08g0226800