Oryza nivara      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 19 genes.  Reviewed (0 or Unreviewed (19

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Orni-0055
ONIVA02G24540
A0A0E0G8Z6
2
LLPS-Orni-0059
ONIVA02G14080
A0A0E0G548
3
LLPS-Orni-0197
ONIVA01G48150
A0A0E0FY34
4
LLPS-Orni-0209
ONIVA02G02900
A0A0E0G0V1
5
LLPS-Orni-0232
ONIVA06G15280
A0A0E0HQ12
6
LLPS-Orni-0286
ONIVA07G03760
A0A0E0HXC7
7
LLPS-Orni-0322
ONIVA12G17650
A0A0E0JCE1
8
LLPS-Orni-0453
ONIVA06G24660
A0A0E0HTF3
9
LLPS-Orni-0756
ONIVA03G18380
A0A0E0GME4
10
LLPS-Orni-0834
ONIVA02G38840
A0A0E0GED7
11
LLPS-Orni-0866
ONIVA06G16710
A0A0E0HQH9
12
LLPS-Orni-0935
ONIVA08G00980
A0A0E0I6J5
13
LLPS-Orni-0943
ONIVA05G05410
A0A0E0HA87
14
LLPS-Orni-0959
ONIVA02G12490
A0A0E0G4K0
15
LLPS-Orni-1123
ONIVA02G02020
A0A0E0G0H6
16
LLPS-Orni-1354
ONIVA12G09220
A0A0E0J9B0
17
LLPS-Orni-1561
ONIVA06G24870
A0A0E0HTH8
18
LLPS-Orni-1766
ONIVA10G02570
A0A0E0IPM3
19
LLPS-Orni-2003
ONIVA02G37700
A0A0E0GDY2