Latimeria chalumnae      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 40 genes.  Reviewed (0 or Unreviewed (40

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Lac-0087
ENSLACG00000006927.1
H3ADV1
2
LLPS-Lac-1064
ENSLACG00000002132.1
H2ZYB4
3
LLPS-Lac-1286
ENSLACG00000001527.1
H2ZWD5
CASP8AP2
4
LLPS-Lac-0284
ENSLACG00000022150.1
M3XH50
CDK1
5
LLPS-Lac-3256
ENSLACG00000014490.1
H3B3H3
CIRBP
6
LLPS-Lac-1623
ENSLACG00000005144.1
H3A824
COIL
7
LLPS-Lac-0373
ENSLACG00000011378.2
M3XK40
CREBBP
8
LLPS-Lac-0830
ENSLACG00000018491.1
H3BGM6
DDX20
9
LLPS-Lac-3899
ENSLACG00000017746.1
H3BE70
FAM118B
10
LLPS-Lac-1094
ENSLACG00000014561.1
H3B3Q4
FBL
11
LLPS-Lac-2134
ENSLACG00000005358.1
H3A8R5
FMR1
12
LLPS-Lac-2220
ENSLACG00000009109.1
H3AL23
GTF2F1
13
LLPS-Lac-0190
ENSLACG00000014109.1
H3B2A1
LOC102350007
14
LLPS-Lac-1454
ENSLACG00000009808.1
H3ANC5
LOC102361814
15
LLPS-Lac-3045
ENSLACG00000018158.1
H3BFJ6
MED26
16
LLPS-Lac-0968
ENSLACG00000014934.1
H3B4Y7
NOLC1
17
LLPS-Lac-2244
ENSLACG00000014882.1
H3B4S4
NOP58
18
LLPS-Lac-1380
ENSLACG00000003381.2
H3A2C3
NPAT
19
LLPS-Lac-2201
ENSLACG00000006848.1
H3ADL3
P2RY12
20
LLPS-Lac-1010
ENSLACG00000004640.1
H3A6F1
PATL1
21
LLPS-Lac-0020
ENSLACG00000003218.1
H3A1U0
POLR1A
22
LLPS-Lac-3760
ENSLACG00000002283.1
H2ZYT4
PSME3
23
LLPS-Lac-0446
ENSLACG00000012962.1
H3AYK7
RUVBL1
24
LLPS-Lac-1465
ENSLACG00000017894.1
H3BEP4
RUVBL2
25
LLPS-Lac-2664
ENSLACG00000007414.1
H3AFF2
SART3
26
LLPS-Lac-3915
ENSLACG00000005996.2
H3AAT6
SLC39A1
27
LLPS-Lac-0670
ENSLACG00000018217.1
H3BFR2
SNRPA1
28
LLPS-Lac-0673
ENSLACG00000007386.1
H3AFC4
SNRPB2
29
LLPS-Lac-3042
ENSLACG00000001955.1
H2ZXR7
SNRPD1
30
LLPS-Lac-0800
ENSLACG00000012610.2
H3AXF9
SNRPE
31
LLPS-Lac-0761
ENSLACG00000017900.2
H3BEQ0
SNRPG
32
LLPS-Lac-0010
ENSLACG00000005959.1
H3AAP8
SPOPL
33
LLPS-Lac-2121
ENSLACG00000017101.1
H3BC22
TARDBP
34
LLPS-Lac-2024
ENSLACG00000016268.1
H3B9A4
TOE1
35
LLPS-Lac-0764
ENSLACG00000016842.2
H3BB71
UBTF
36
LLPS-Lac-1613
ENSLACG00000003569.2
H3A2Y6
USPL1
37
LLPS-Lac-0919
ENSLACG00000017983.2
H3BEY9
VRK1
38
LLPS-Lac-2599
ENSLACG00000018213.1
H3BFQ8
XPO1
39
LLPS-Lac-2341
ENSLACG00000002661.2
H3A004
ZGPAT
40
LLPS-Lac-2005
ENSLACG00000008138.1
H3AHV0
ZNF277