Komagataella pastoris      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 14 genes.  Reviewed (0 or Unreviewed (14

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Kop-1023
PAS_chr1-3_0072
C4QV54
PAS_chr1-3_0072
2
LLPS-Kop-0255
PAS_chr1-4_0403
C4QYC8
PAS_chr1-4_0403
3
LLPS-Kop-0548
PAS_chr2-1_0138
C4QZS1
PAS_chr2-1_0138
4
LLPS-Kop-0493
PAS_chr2-1_0373
C4R0H0
PAS_chr2-1_0373
5
LLPS-Kop-0259
PAS_chr2-1_0688
C4R1G1
PAS_chr2-1_0688
6
LLPS-Kop-1033
PAS_chr2-1_0818
C4R000
PAS_chr2-1_0818
7
LLPS-Kop-0504
PAS_chr2-2_0243
C4R2E8
PAS_chr2-2_0243
8
LLPS-Kop-0404
PAS_chr2-2_0387
C4R1Z5
PAS_chr2-2_0387
9
LLPS-Kop-0356
PAS_chr2-2_0402
C4R1Y3
PAS_chr2-2_0402
10
LLPS-Kop-0295
PAS_chr4_0278
C4R7D7
PAS_chr4_0278
11
LLPS-Kop-0117
PAS_chr4_0475
C4R806
PAS_chr4_0475
12
LLPS-Kop-1467
PAS_chr4_0781
C4R8X2
PAS_chr4_0781
13
LLPS-Kop-0040
PAS_chr4_0808
C4R903
PAS_chr4_0808
14
LLPS-Kop-0447
PAS_FragB_0004
C4QZ61
PAS_FragB_0004