Astyanax mexicanus      Cajal body


※ Cajal body introduction

    Cajal bodies is a kind of non-membrane-bound nuclear bodies, formation of such sub-organelles usually involves dynamic processes, which can move within the nucleoplasm except when transiently immobilized through interaction with chromatin (1). The Cajal body has been suggested to be associated with telomere maintenance and maturation of the splicing machinery and processing of histone mRNA (2;3), it is rich in ribonucleoprotein (RNP) complexes and characterized by the marker protein coilin that interacts with many factors and thereby serves as a platform for the assembly of Cajal bodies (1). WRAP53β has been demonstrated to be an essential Cajal Body Component, it guides SMN across the cell to Cajal Bodies, and phosphorylation of WRAP53β by ATM promotes its involvement in the DNA damage response (4). besides, Fam118 is a newly identified component of Cajal bodies that is required for Cajal body formation (5). Defects in Cajal body formation are linked to impaired cell proliferation and splicing (6). In fact, Cajal bodies are not essential in telomerase function and telomere elongation ,whereas certain Cajal body factors such as WRAP53β clearly play important roles in telomere homeostasis (1).

References
1. Henriksson, S., & Farnebo, M. (2015) On the road with WRAP53beta: guardian of Cajal bodies and genome integrity. Front Genet, 6, 91. PMID: 25852739
2. Machyna, M., Heyn, P., & Neugebauer, K. M. (2013) Cajal bodies: where form meets function. Wiley Interdiscip Rev RNA, 4(1), 17-34. PMID: 23042601
3. Hutten, S., Chachami, G., Winter, U., Melchior, F., & Lamond, A. I. (2014) A role for the Cajal-body-associated SUMO isopeptidase USPL1 in snRNA transcription mediated by RNA polymerase II. J. Cell. Sci., 127(Pt 5), 1065-1078. PMID: 24413172
4. Coucoravas, C., Dhanjal, S., Henriksson, S., Bohm, S., & Farnebo, M. (2017) Phosphorylation of the Cajal body protein WRAP53beta by ATM promotes its involvement in the DNA damage response. RNA Biol., 14(6), 804-813. PMID: 27715493
5. Li, Y., Fong, K. W., Tang, M., Han, X., Gong, Z., Ma, W, Chen, J. (2014) Fam118B, a newly identified component of Cajal bodies, is required for Cajal body formation, snRNP biogenesis and cell viability. J. Cell Sci., 127(Pt 9), 2029-2039. PMID:24569877
6. Lemm, I., Girard, C., Kuhn, A. N., Watkins, N. J., Schneider, M., Bordonne, R., & Luhrmann, R. (2006) Ongoing U snRNP biogenesis is required for the integrity of Cajal bodies. Mol. Biol. Cell, 17(7), 3221-3231. PMID:16687569


There are 41 genes.  Reviewed (0 or Unreviewed (41

No.StatusDrLLPS IDEnsemble Gene IDUniProt AccessionGene Name
1
LLPS-Asm-0036
ENSAMXG00000030568.1
A0A3B1IKU3
2
LLPS-Asm-0089
ENSAMXG00000008041.2
W5KKZ3
3
LLPS-Asm-0155
ENSAMXG00000033981.1
A0A3B1IXY6
4
LLPS-Asm-0160
ENSAMXG00000040738.1
A0A3B1IRP9
5
LLPS-Asm-0210
ENSAMXG00000037263.1
A0A3B1K9H9
6
LLPS-Asm-0284
ENSAMXG00000030237.1
A0A3B1K930
7
LLPS-Asm-0455
ENSAMXG00000002262.2
W5K401
8
LLPS-Asm-0458
ENSAMXG00000035871.1
A0A3B1KK47
9
LLPS-Asm-0471
ENSAMXG00000005022.2
A0A3B1KI76
10
LLPS-Asm-0660
ENSAMXG00000012704.2
W5KZU3
11
LLPS-Asm-0859
ENSAMXG00000018583.2
W5LH26
12
LLPS-Asm-0911
ENSAMXG00000030795.1
A0A3B1JA12
13
LLPS-Asm-0980
ENSAMXG00000042832.1
A0A3B1JHH4
14
LLPS-Asm-1064
ENSAMXG00000031029.1
A0A3B1JBZ4
15
LLPS-Asm-1146
ENSAMXG00000020354.2
A0A3B1JC41
16
LLPS-Asm-1157
ENSAMXG00000014316.2
W5L4H0
17
LLPS-Asm-1174
ENSAMXG00000015612.2
A0A3B1IPD2
18
LLPS-Asm-1291
ENSAMXG00000004589.2
A0A3B1JRL3
19
LLPS-Asm-1348
ENSAMXG00000015833.2
W5L8Y0
20
LLPS-Asm-1352
ENSAMXG00000042085.1
A0A3B1JNH5
21
LLPS-Asm-1526
ENSAMXG00000010731.2
A0A3B1IM58
22
LLPS-Asm-1648
ENSAMXG00000042813.1
23
LLPS-Asm-1652
ENSAMXG00000013884.2
A0A3B1IP04
24
LLPS-Asm-1656
ENSAMXG00000037402.1
A0A3B1IKH1
25
LLPS-Asm-1698
ENSAMXG00000008546.2
A0A3B1JFR7
26
LLPS-Asm-1718
ENSAMXG00000034294.1
A0A3B1JQF4
27
LLPS-Asm-1846
ENSAMXG00000005020.2
W5KC33
28
LLPS-Asm-2013
ENSAMXG00000038943.1
A0A3B1JRN8
29
LLPS-Asm-2072
ENSAMXG00000003299.2
W5K705
30
LLPS-Asm-2250
ENSAMXG00000031842.1
A0A3B1JWT5
31
LLPS-Asm-2350
ENSAMXG00000019143.2
W5LJ04
32
LLPS-Asm-2357
ENSAMXG00000010803.2
W5KU27
33
LLPS-Asm-2413
ENSAMXG00000042246.1
A0A3B1K6W1
34
LLPS-Asm-2710
ENSAMXG00000025976.2
W5LU65
35
LLPS-Asm-2731
ENSAMXG00000004045.2
W5K971
36
LLPS-Asm-2852
ENSAMXG00000011553.2
W5KWB2
37
LLPS-Asm-3492
ENSAMXG00000040307.1
A0A3B1J8L7
38
LLPS-Asm-3592
ENSAMXG00000033331.1
A0A3B1KER2
39
LLPS-Asm-3820
ENSAMXG00000043696.1
A0A3B1IV77
40
LLPS-Asm-4005
ENSAMXG00000011024.2
W5KUR3
SLC39A1
41
LLPS-Asm-1281
ENSAMXG00000007090.2
A0A3B1K8P4
YBX2