LLPS-Zem-2592
ZEAMMB73_Zm00001d031529
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Pumilio homolog 5 |
Gene Name: | ZEAMMB73_Zm00001d031529 |
Ensembl Gene: | Zm00001d031529 |
Ensembl Protein: | Zm00001d031529_P011 |
Organism: | Zea mays |
Taxa ID: | 4577 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MEKGMMFFCG ESFSTMTAGG GVTGAWSPRV SGQPAGLDAP SLMATESAFR LIGGTGARDW 60 61 SKGFGAFGSS AGALSGEDLG FVDNDTGVYG GWNKSVPNRS GSAPPSMEGS LAALGHLIDQ 120 121 QSGSFEASLT TLDNITDSSK SEEQLRADPA YFEYYGSKVN LNPRLPPPLI SRESRRLMNR 180 181 VGKAKEWRMV SQDNSSKGSI YVPRSMLSTH KEEPEDDKSP RLDSSSVEDA QIVSSASNFQ 240 241 SQDFMLERFQ QSVASSPDSS SSNPSNSNTG DSMPVYSDIN LLKSLSFDAL KQSDLNSWTP 300 301 KGPLKSNVNN DLSSPPLSSS SYPGSKTGTQ TFEQEKAAAD TKHGNVVLGS GAAVTEVDNV 360 361 DSIMKNLKLS LDVHTSSPAK QRWQDNVLQQ YGSFLPAQGD PIQLTTQGPH PPHVPFVDNL 420 421 SHAQLKLPDI HQNLPQPSMT TPFYTPNSFG NPYYQNLHPA NAFPTSIGTG GYAVSGSILP 480 481 PFMAGYAPQG PLATPLDSSM TPSFSGRPSG FLPAGNLTGG TDFMQSCKVY GQFEPGMQPS 540 541 IPDPNFIHFF QHPSLFQYTG GNQYNTMGPR FTVVGNLAES FDSQNTIPQA ASAYPSDQRL 600 601 PLPITGFPNS PTARRGGTVP NYQGISSYIG VPMTYPTSPV FQGQTLPGVL PPVRRNDSAG 660 661 FLPPSRNITG SPGIQGQRAR QKFDESKTCS FLEELKSNRA RMVELSDITG RVVEYSADQH 720 721 GSRFIQQKLE NCTAEEKTSV FAEILPHASA LMTDVFGNYV IQKFFEHGTR EQRRDLATKL 780 781 VGHVLPLSLQ MYGCRVIQKA LEVMELDQKI DLVHELDGHI MRCVRDQNGN HVIQKCIECV 840 841 PTEHIGFVVS AFQGQVTSLS MHPYGCRVIQ RILEHCGGNS QGQCIIDEIL QWVCILAQDQ 900 901 YGNYVTQHVL ERGKAHERSQ IITKLAGQVV TMSQNKYASN VIEKCFQHGD IAERDLLIRR 960 961 IVEQTEGNNN LLAMMKDQYA NYVVQKILET CNEDQRELLL SRVKDHMQAL RKYTYGKHIV 1020 1021 SRVEQLCGDG KFHHPPAVAP RFSEAVGHTA MTNLQLSPFQ ELPSQVLETN RRLILHRLEG 1080 1081 VLLFCSFRQ 1089 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCTACTG AGAGTGCTTT CCGATTGATT GGTGGGACGG GGGCTAGGGA CTGGAGTAAG 60 61 GGATTTGGTG CATTTGGCTC TTCAGCAGGT GCCTTATCAG GGGAAGACTT GGGATTTGTG 120 121 GATAATGACA CTGGGGTTTA TGGGGGCTGG AACAAATCTG TTCCAAATCG TAGTGGAAGC 180 181 GCACCGCCTA GCATGGAAGG ATCTCTTGCT GCTCTTGGCC ATCTCATTGA TCAGCAGAGT 240 241 GGGAGCTTTG AAGCTAGTTT GACAACCTTG GATAACATAA CTGACAGTTC CAAATCTGAG 300 301 GAGCAACTAC GTGCTGATCC AGCATATTTT GAGTATTATG GCTCCAAGGT GAATCTGAAT 360 361 CCAAGGCTCC CTCCGCCACT TATTTCAAGG GAGAGTCGCC GATTAATGAA CCGTGTTGGC 420 421 AAGGCTAAAG AGTGGAGGAT GGTCTCCCAA GATAACAGCA GCAAAGGCTC AATATACGTT 480 481 CCTCGATCTA TGTTGTCAAC TCACAAAGAA GAACCTGAGG ATGATAAATC TCCAAGATTG 540 541 GATTCAAGTT CAGTGGAGGA TGCCCAGATT GTCTCCAGTG CATCCAACTT TCAGAGCCAG 600 601 GATTTTATGC TGGAGAGGTT TCAACAGAGT GTTGCTTCTT CGCCTGATAG TTCATCTTCT 660 661 AATCCTTCAA ATAGCAACAC TGGTGATTCT ATGCCTGTAT ATTCTGACAT AAATTTGTTA 720 721 AAGAGTTTGT CATTTGATGC TTTGAAGCAA TCGGATTTGA ACTCTTGGAC ACCAAAAGGC 780 781 CCACTGAAAA GTAATGTTAA CAATGACCTT TCATCGCCAC CCCTTTCCAG TTCATCATAT 840 841 CCTGGTAGCA AAACTGGTAC GCAAACTTTT GAGCAAGAAA AGGCTGCTGC TGACACCAAA 900 901 CATGGAAATG TTGTGCTTGG CAGTGGCGCA GCTGTTACTG AAGTTGATAA TGTGGACTCC 960 961 ATTATGAAGA ATTTGAAGTT AAGTTTGGAT GTCCATACAT CCTCACCTGC CAAGCAGAGG 1020 1021 TGGCAGGACA ATGTCTTGCA GCAGTATGGT TCCTTTTTAC CAGCCCAAGG TGATCCTATT 1080 1081 CAATTGACTA CTCAAGGACC CCATCCTCCT CATGTACCTT TTGTTGATAA CTTGTCTCAT 1140 1141 GCTCAGCTCA AGTTGCCTGA CATCCACCAA AATTTACCAC AACCTAGTAT GACAACACCT 1200 1201 TTCTATACAC CAAATTCTTT TGGGAACCCT TATTATCAGA ATTTGCACCC TGCTAATGCT 1260 1261 TTTCCAACCT CAATTGGAAC TGGGGGTTAT GCTGTAAGTG GTTCTATTTT GCCACCGTTT 1320 1321 ATGGCTGGCT ATGCTCCCCA AGGTCCTCTT GCTACACCTC TTGACAGTTC TATGACTCCA 1380 1381 AGCTTTAGTG GCAGGCCATC TGGATTTCTT CCAGCAGGGA ATCTTACAGG GGGAACAGAT 1440 1441 TTTATGCAGT CATGTAAAGT ATACGGACAA TTTGAGCCTG GTATGCAGCC ATCCATTCCC 1500 1501 GATCCGAACT TCATTCATTT CTTTCAGCAT CCCTCTTTAT TTCAGTATAC TGGAGGAAAT 1560 1561 CAATACAATA CAATGGGTCC AAGATTTACT GTTGTTGGGA ATTTAGCTGA AAGCTTTGAT 1620 1621 TCACAAAACA CGATACCTCA AGCTGCATCT GCATATCCAT CTGATCAGAG GCTTCCACTG 1680 1681 CCAATAACTG GCTTTCCTAA TTCTCCTACA GCCAGAAGAG GAGGGACTGT TCCAAATTAT 1740 1741 CAAGGCATTT CATCCTACAT TGGAGTGCCA ATGACTTATC CTACTAGTCC AGTGTTTCAG 1800 1801 GGACAAACAT TGCCTGGAGT ATTGCCTCCT GTTAGGAGAA ACGACTCTGC TGGATTTCTG 1860 1861 CCCCCCTCAA GAAACATCAC TGGTAGCCCT GGAATTCAAG GGCAGCGAGC AAGACAGAAG 1920 1921 TTTGATGAAT CAAAGACCTG CTCTTTCTTA GAAGAGTTGA AGTCCAACAG AGCGCGCATG 1980 1981 GTTGAGCTTT CTGACATCAC AGGCCGTGTA GTTGAATACA GTGCTGACCA ACATGGTAGC 2040 2041 CGATTCATCC AGCAGAAGTT GGAAAACTGC ACCGCCGAAG AGAAGACATC TGTGTTTGCC 2100 2101 GAGATTCTTC CTCATGCTTC AGCATTAATG ACTGACGTTT TTGGGAATTA TGTGATCCAA 2160 2161 AAGTTTTTTG AACATGGAAC TCGTGAGCAA AGGAGGGATC TTGCCACCAA GCTTGTTGGT 2220 2221 CACGTTTTGC CTTTGAGTCT TCAGATGTAT GGCTGCCGTG TAATCCAGAA GAGGTCCCTA 2280 2281 TTTGGACCTG AAGTGAAGCA TTTTAAAGTT GAAGGACCCA GATTCTCACT TCGAGAGTTT 2340 2341 ATGAACCTAG ATGAGAATCT AAGGTAA 2367 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Sob-0281 | Sorghum bicolor | 91.31 | 0.0 | 1771 |
LLPS-Sei-0567 | Setaria italica | 85.22 | 0.0 | 1657 |
LLPS-Orbr-1013 | Oryza brachyantha | 73.28 | 0.0 | 1426 |
LLPS-Ors-2332 | Oryza sativa | 73.08 | 0.0 | 1436 |
LLPS-Orgl-0996 | Oryza glumaepatula | 73.04 | 0.0 | 1442 |
LLPS-Orb-0653 | Oryza barthii | 72.94 | 0.0 | 1444 |
LLPS-Orm-1044 | Oryza meridionalis | 72.41 | 0.0 | 1436 |
LLPS-Orr-1039 | Oryza rufipogon | 71.57 | 0.0 | 1434 |
LLPS-Lep-0823 | Leersia perrieri | 71.53 | 0.0 | 1405 |
LLPS-Brd-2199 | Brachypodium distachyon | 70.91 | 0.0 | 1382 |
LLPS-Tra-0357 | Triticum aestivum | 70.69 | 0.0 | 1374 |
LLPS-Orni-2223 | Oryza nivara | 70.29 | 0.0 | 1434 |
LLPS-Sem-1425 | Selaginella moellendorffii | 69.55 | 9e-162 | 489 |
LLPS-Met-2154 | Medicago truncatula | 62.14 | 8e-164 | 518 |
LLPS-Sot-2137 | Solanum tuberosum | 61.27 | 4e-161 | 510 |
LLPS-Org-1582 | Oryza glaberrima | 60.99 | 2e-158 | 505 |
LLPS-Ori-2257 | Oryza indica | 60.99 | 4e-158 | 504 |
LLPS-Nia-1680 | Nicotiana attenuata | 60.93 | 2e-159 | 504 |
LLPS-Thc-2449 | Theobroma cacao | 60.77 | 7e-159 | 505 |
LLPS-Phv-1241 | Phaseolus vulgaris | 60.61 | 2e-161 | 513 |
LLPS-Coc-0556 | Corchorus capsularis | 60.44 | 4e-158 | 502 |
LLPS-Pot-0498 | Populus trichocarpa | 60.42 | 2e-160 | 508 |
LLPS-Gor-2131 | Gossypium raimondii | 59.77 | 3e-158 | 504 |
LLPS-Tru-0915 | Triticum urartu | 59.56 | 2e-157 | 492 |
LLPS-Bro-0325 | Brassica oleracea | 59.19 | 1e-153 | 488 |
LLPS-Brn-2662 | Brassica napus | 59.19 | 1e-153 | 488 |
LLPS-Art-2609 | Arabidopsis thaliana | 59.13 | 2e-156 | 497 |
LLPS-Brr-1802 | Brassica rapa | 59.09 | 2e-152 | 488 |
LLPS-Mae-2515 | Manihot esculenta | 59.02 | 3e-156 | 498 |
LLPS-Orp-0353 | Oryza punctata | 58.87 | 4e-151 | 480 |
LLPS-Mua-0374 | Musa acuminata | 58.78 | 2e-156 | 490 |
LLPS-Sol-0286 | Solanum lycopersicum | 58.37 | 5e-162 | 512 |
LLPS-Arl-0680 | Arabidopsis lyrata | 57.78 | 6e-160 | 491 |
LLPS-Drm-0264 | Drosophila melanogaster | 56.72 | 2e-116 | 400 |
LLPS-Xet-1935 | Xenopus tropicalis | 55.95 | 4e-121 | 407 |
LLPS-Hea-2588 | Helianthus annuus | 55.94 | 5e-151 | 479 |
LLPS-Hov-1500 | Hordeum vulgare | 55.69 | 9e-146 | 470 |
LLPS-Cis-1382 | Ciona savignyi | 55.64 | 2e-101 | 328 |
LLPS-Anc-1728 | Anolis carolinensis | 55.46 | 2e-124 | 414 |
LLPS-Sah-3765 | Sarcophilus harrisii | 55.46 | 1e-122 | 409 |
LLPS-Pof-2297 | Poecilia formosa | 55.33 | 3e-118 | 399 |
LLPS-Xim-1215 | Xiphophorus maculatus | 55.33 | 3e-118 | 399 |
LLPS-Pes-2312 | Pelodiscus sinensis | 55.17 | 1e-122 | 412 |
LLPS-Rhb-3980 | Rhinopithecus bieti | 55.04 | 8e-123 | 410 |
LLPS-Orc-2501 | Oryctolagus cuniculus | 55.04 | 3e-123 | 411 |
LLPS-Man-1248 | Macaca nemestrina | 55.04 | 7e-123 | 410 |
LLPS-Fec-0307 | Felis catus | 55.04 | 6e-123 | 410 |
LLPS-Hos-0193 | Homo sapiens | 55.04 | 8e-123 | 410 |
LLPS-Pat-3139 | Pan troglodytes | 55.04 | 8e-123 | 410 |
LLPS-Pap-4018 | Pan paniscus | 55.04 | 8e-123 | 410 |
LLPS-Urm-2085 | Ursus maritimus | 55.04 | 6e-123 | 410 |
LLPS-Ict-2376 | Ictidomys tridecemlineatus | 55.04 | 5e-123 | 410 |
LLPS-Cas-2719 | Carlito syrichta | 55.04 | 3e-123 | 410 |
LLPS-Mam-2125 | Macaca mulatta | 55.04 | 9e-123 | 410 |
LLPS-Cap-4498 | Cavia porcellus | 55.04 | 6e-123 | 410 |
LLPS-Eqc-0098 | Equus caballus | 55.04 | 6e-123 | 410 |
LLPS-Poa-4145 | Pongo abelii | 55.04 | 5e-123 | 410 |
LLPS-Caf-3849 | Canis familiaris | 55.04 | 6e-123 | 410 |
LLPS-Caj-4594 | Callithrix jacchus | 55.04 | 6e-123 | 410 |
LLPS-Fud-3995 | Fukomys damarensis | 55.04 | 2e-123 | 411 |
LLPS-Gog-2180 | Gorilla gorilla | 55.04 | 8e-123 | 410 |
LLPS-Sus-3805 | Sus scrofa | 55.04 | 6e-123 | 410 |
LLPS-Aon-3176 | Aotus nancymaae | 55.04 | 7e-123 | 410 |
LLPS-Cea-1196 | Cercocebus atys | 55.04 | 8e-123 | 410 |
LLPS-Chs-3265 | Chlorocebus sabaeus | 55.04 | 8e-123 | 410 |
LLPS-Maf-0984 | Macaca fascicularis | 55.04 | 7e-123 | 410 |
LLPS-Mup-1110 | Mustela putorius furo | 55.04 | 6e-123 | 410 |
LLPS-Ova-1843 | Ovis aries | 55.04 | 4e-123 | 410 |
LLPS-Mal-1057 | Mandrillus leucophaeus | 55.04 | 8e-123 | 410 |
LLPS-Bot-3439 | Bos taurus | 55.04 | 3e-123 | 410 |
LLPS-Chr-0995 | Chlamydomonas reinhardtii | 54.95 | 1e-117 | 402 |
LLPS-Fia-3807 | Ficedula albicollis | 54.89 | 5e-123 | 410 |
LLPS-Meg-0412 | Meleagris gallopavo | 54.89 | 7e-123 | 410 |
LLPS-Tag-3323 | Taeniopygia guttata | 54.89 | 4e-123 | 410 |
LLPS-Myl-4327 | Myotis lucifugus | 54.76 | 7e-123 | 410 |
LLPS-Orn-2903 | Oreochromis niloticus | 54.73 | 5e-117 | 397 |
LLPS-Loa-4137 | Loxodonta africana | 54.73 | 7e-122 | 407 |
LLPS-Scm-2194 | Scophthalmus maximus | 54.73 | 5e-117 | 396 |
LLPS-Nol-4003 | Nomascus leucogenys | 54.73 | 3e-121 | 405 |
LLPS-Mum-3842 | Mus musculus | 54.73 | 4e-122 | 407 |
LLPS-Mea-3708 | Mesocricetus auratus | 54.73 | 5e-122 | 407 |
LLPS-Aim-1872 | Ailuropoda melanoleuca | 54.73 | 6e-122 | 407 |
LLPS-Dio-3555 | Dipodomys ordii | 54.73 | 4e-121 | 404 |
LLPS-Abg-1760 | Absidia glauca | 54.73 | 9e-123 | 407 |
LLPS-Mod-3851 | Monodelphis domestica | 54.57 | 9e-121 | 404 |
LLPS-Lac-1312 | Latimeria chalumnae | 54.57 | 2e-120 | 406 |
LLPS-Ran-0566 | Rattus norvegicus | 54.47 | 5e-122 | 407 |
LLPS-Dar-0953 | Danio rerio | 54.44 | 6e-116 | 392 |
LLPS-Tut-0775 | Tursiops truncatus | 54.31 | 2e-119 | 400 |
LLPS-Gaa-3277 | Gasterosteus aculeatus | 54.23 | 4e-117 | 397 |
LLPS-Tar-3374 | Takifugu rubripes | 54.23 | 4e-117 | 396 |
LLPS-Ten-3082 | Tetraodon nigroviridis | 54.07 | 1e-115 | 392 |
LLPS-Orl-0166 | Oryzias latipes | 53.94 | 5e-116 | 394 |
LLPS-Gaga-1864 | Gallus gallus | 53.85 | 2e-114 | 389 |
LLPS-Paa-3080 | Papio anubis | 53.85 | 1e-114 | 390 |
LLPS-Leo-2296 | Lepisosteus oculatus | 53.35 | 2e-115 | 392 |
LLPS-Anp-1820 | Anas platyrhynchos | 53.28 | 6e-122 | 409 |
LLPS-Scf-2583 | Scleropages formosus | 53.26 | 2e-122 | 410 |
LLPS-Cus-1840 | Cucumis sativus | 53.19 | 0.0 | 622 |
LLPS-Vir-0094 | Vigna radiata | 51.52 | 0.0 | 570 |
LLPS-Cii-1802 | Ciona intestinalis | 51.08 | 6e-123 | 402 |
LLPS-Dac-1882 | Daucus carota | 50.59 | 5e-179 | 557 |
LLPS-Zyt-1241 | Zymoseptoria tritici | 50.58 | 1e-78 | 265 |
LLPS-Amt-1171 | Amborella trichopoda | 50.09 | 2e-164 | 520 |
LLPS-Php-0939 | Physcomitrella patens | 49.75 | 4e-174 | 549 |
LLPS-Yal-1117 | Yarrowia lipolytica | 49.57 | 1e-110 | 368 |
LLPS-Trv-0386 | Trichoderma virens | 49.5 | 4e-91 | 300 |
LLPS-Scs-0542 | Sclerotinia sclerotiorum | 49.17 | 3e-107 | 364 |
LLPS-Trr-0034 | Trichoderma reesei | 49.09 | 8e-96 | 315 |
LLPS-Chc-1229 | Chondrus crispus | 48.97 | 1e-100 | 350 |
LLPS-Via-1969 | Vigna angularis | 48.85 | 1e-162 | 516 |
LLPS-Ved-1522 | Verticillium dahliae | 48.8 | 2e-99 | 340 |
LLPS-Gas-0776 | Galdieria sulphuraria | 48.5 | 7e-100 | 345 |
LLPS-Miv-0030 | Microbotryum violaceum | 48.38 | 8e-92 | 323 |
LLPS-Cae-1048 | Caenorhabditis elegans | 48.32 | 2e-95 | 325 |
LLPS-Viv-1258 | Vitis vinifera | 48.19 | 2e-11 | 73.2 |
LLPS-Spr-0342 | Sporisorium reilianum | 48.16 | 8e-98 | 340 |
LLPS-Blg-0492 | Blumeria graminis | 48.07 | 2e-93 | 325 |
LLPS-Usm-0066 | Ustilago maydis | 48.02 | 1e-88 | 313 |
LLPS-Asni-1611 | Aspergillus niger | 47.31 | 1e-103 | 354 |
LLPS-Scc-0378 | Schizosaccharomyces cryophilus | 46.89 | 1e-104 | 351 |
LLPS-Asf-0135 | Aspergillus flavus | 46.7 | 6e-106 | 349 |
LLPS-Aso-1369 | Aspergillus oryzae | 46.7 | 3e-104 | 354 |
LLPS-Phn-1364 | Phaeosphaeria nodorum | 46.59 | 5e-92 | 321 |
LLPS-Asfu-1017 | Aspergillus fumigatus | 46.58 | 1e-105 | 358 |
LLPS-Pytr-1477 | Pyrenophora triticirepentis | 46.41 | 7e-88 | 309 |
LLPS-Pyt-0456 | Pyrenophora teres | 46.41 | 2e-88 | 310 |
LLPS-Nef-0927 | Neosartorya fischeri | 46.33 | 1e-105 | 359 |
LLPS-Ast-1117 | Aspergillus terreus | 46.33 | 9e-93 | 322 |
LLPS-Asc-1471 | Aspergillus clavatus | 46.07 | 4e-105 | 357 |
LLPS-Dos-1587 | Dothistroma septosporum | 45.43 | 5e-87 | 307 |
LLPS-Beb-1256 | Beauveria bassiana | 45.27 | 6e-98 | 335 |
LLPS-Cog-1474 | Colletotrichum gloeosporioides | 45.19 | 7e-100 | 342 |
LLPS-Mao-0430 | Magnaporthe oryzae | 45.07 | 4e-96 | 332 |
LLPS-Cogr-1517 | Colletotrichum graminicola | 44.85 | 2e-102 | 348 |
LLPS-Fus-1588 | Fusarium solani | 44.01 | 5e-76 | 261 |
LLPS-Cym-0908 | Cyanidioschyzon merolae | 43.96 | 2e-96 | 341 |
LLPS-Scj-0581 | Schizosaccharomyces japonicus | 43.77 | 9e-97 | 333 |
LLPS-Asn-1529 | Aspergillus nidulans | 43.7 | 8e-83 | 293 |
LLPS-Gag-0922 | Gaeumannomyces graminis | 43.18 | 7e-86 | 303 |
LLPS-Map-0498 | Magnaporthe poae | 43.11 | 8e-84 | 298 |
LLPS-Scp-1116 | Schizosaccharomyces pombe | 42.99 | 1e-108 | 363 |
LLPS-Crn-1256 | Cryptococcus neoformans | 42.82 | 2e-86 | 300 |
LLPS-Glm-1400 | Glycine max | 42.61 | 0.0 | 709 |
LLPS-Kop-0956 | Komagataella pastoris | 42.42 | 1e-96 | 330 |
LLPS-Prp-1527 | Prunus persica | 42.37 | 0.0 | 721 |
LLPS-Sac-1567 | Saccharomyces cerevisiae | 42.01 | 2e-79 | 284 |
LLPS-Asg-1498 | Ashbya gossypii | 41.41 | 2e-82 | 291 |
LLPS-Coo-0057 | Colletotrichum orbiculare | 41.22 | 2e-98 | 337 |
LLPS-Put-0636 | Puccinia triticina | 40.15 | 1e-82 | 291 |
LLPS-Nec-0479 | Neurospora crassa | 37.84 | 1e-67 | 248 |