LLPS-Zem-1898
ZEAMMB73_Zm00001d018031
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Expansin |
| Gene Name: | ZEAMMB73_Zm00001d018031 |
| Ensembl Gene: | Zm00001d018031 |
| Ensembl Protein: | Zm00001d018031_P001 |
| Organism: | Zea mays |
| Taxa ID: | 4577 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Zm00001d018031_T001 | Zm00001d018031_P001 |
| Ensembl | Zm00001d018031_T002 | Zm00001d018031_P002 |
| UniProt | A0A1D6HK98, A0A1D6HK98_MAIZE | |
| GeneBank | CM000781 | AQK74857.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MALRQAVLLA VVLAALLPLA LSRGLGLVHG HVRPHTHGLG LGHHHAQPHP HPHGHAPLVG 60 61 GAWSSAHATF YGGGDASGTM GGACGYGNLY SQGYGTNTAA LSTALFNNGL SCGACFEVRC 120 121 DAAGGGSHSC LPGSVVVTAT NFCPPNNALP SDDGGWCNPP RAHFDMSQPV FQRIALYRAG 180 181 IVPVSYRRVA CNKKGGIRFT INGHSYFNLV LVTNVGGAGD VHAVAVKAER SPGWQALSRN 240 241 WGQNWQSNTL LDGQALSFRV TTSDGRSVLS NNAAPRGWSF GQTFSGAQFN 290 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGCTTC GCCAGGCCGT CCTCCTGGCC GTGGTCCTCG CCGCGCTGCT CCCGCTCGCC 60 61 CTCTCTCGCG GGTTGGGCTT GGTGCACGGG CATGTGCGGC CGCACACGCA CGGGCTGGGG 120 121 CTCGGCCACC ACCACGCCCA GCCGCACCCG CACCCGCACG GGCACGCACC GCTCGTAGGT 180 181 GGCGCGTGGT CCTCTGCTCA CGCCACCTTC TACGGCGGCG GCGACGCGTC CGGCACCATG 240 241 GGCGGTGCGT GCGGGTACGG CAACCTCTAC AGCCAGGGGT ACGGCACCAA CACGGCGGCG 300 301 CTGAGCACGG CGCTCTTCAA CAACGGGCTC AGCTGCGGCG CCTGCTTCGA GGTGCGCTGC 360 361 GACGCGGCGG GGGGCGGGAG CCACTCGTGC CTGCCGGGCT CCGTCGTGGT GACGGCCACC 420 421 AACTTCTGCC CGCCCAACAA CGCGCTCCCC TCCGACGACG GCGGCTGGTG CAACCCGCCG 480 481 CGCGCCCACT TCGACATGTC GCAGCCCGTG TTCCAGCGCA TCGCGCTCTA CAGGGCCGGC 540 541 ATTGTTCCCG TCTCCTACCG CAGGGTTGCG TGCAACAAGA AGGGCGGCAT ACGTTTCACC 600 601 ATCAACGGCC ACTCCTACTT CAACCTGGTA CTGGTGACCA ACGTGGGAGG CGCCGGCGAC 660 661 GTGCACGCGG TTGCCGTGAA GGCCGAGCGC TCCCCCGGGT GGCAGGCCCT GTCGCGCAAC 720 721 TGGGGCCAGA ACTGGCAGAG CAACACGCTC CTGGACGGGC AGGCCCTGTC CTTCCGCGTC 780 781 ACCACCAGCG ACGGCCGCTC CGTGCTCTCC AACAACGCCG CCCCCCGCGG CTGGTCTTTC 840 841 GGCCAGACTT TCAGCGGTGC CCAGTTCAAC TGA 873 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Cell wall | |
Cellular Component | Extracellular region | |
Cellular Component | Membrane | |
Biological Process | Plant-type cell wall organization |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sei-1927 | Setaria italica | 96.93 | 2e-136 | 394 |
| LLPS-Arl-2491 | Arabidopsis lyrata | 80.53 | 2e-107 | 319 |
| LLPS-Mae-1104 | Manihot esculenta | 80.18 | 4e-105 | 313 |
| LLPS-Brn-3233 | Brassica napus | 79.74 | 3e-107 | 319 |
| LLPS-Art-0767 | Arabidopsis thaliana | 79.37 | 1e-104 | 313 |
| LLPS-Tra-0037 | Triticum aestivum | 79.3 | 2e-106 | 317 |
| LLPS-Brr-0147 | Brassica rapa | 79.3 | 6e-107 | 318 |
| LLPS-Bro-1715 | Brassica oleracea | 79.3 | 1e-106 | 317 |
| LLPS-Dac-1719 | Daucus carota | 78.85 | 3e-105 | 313 |
| LLPS-Hea-2326 | Helianthus annuus | 77.97 | 3e-103 | 308 |
| LLPS-Brd-1640 | Brachypodium distachyon | 77.97 | 2e-104 | 311 |
| LLPS-Cus-2127 | Cucumis sativus | 77.97 | 9e-107 | 317 |
| LLPS-Pot-2155 | Populus trichocarpa | 77.97 | 8e-101 | 303 |
| LLPS-Orm-1590 | Oryza meridionalis | 77.97 | 1e-105 | 315 |
| LLPS-Orni-1720 | Oryza nivara | 77.53 | 8e-105 | 312 |
| LLPS-Orgl-1756 | Oryza glumaepatula | 77.53 | 8e-105 | 312 |
| LLPS-Sob-1075 | Sorghum bicolor | 77.53 | 4e-105 | 313 |
| LLPS-Org-2255 | Oryza glaberrima | 77.53 | 8e-105 | 312 |
| LLPS-Orr-2317 | Oryza rufipogon | 77.53 | 8e-105 | 312 |
| LLPS-Prp-0302 | Prunus persica | 77.53 | 2e-103 | 309 |
| LLPS-Ori-2317 | Oryza indica | 77.09 | 2e-104 | 312 |
| LLPS-Lep-2314 | Leersia perrieri | 77.09 | 1e-103 | 309 |
| LLPS-Amt-2058 | Amborella trichopoda | 77.09 | 1e-103 | 309 |
| LLPS-Ors-2411 | Oryza sativa | 77.09 | 2e-104 | 312 |
| LLPS-Orp-1900 | Oryza punctata | 77.09 | 3e-103 | 308 |
| LLPS-Orb-0150 | Oryza barthii | 76.65 | 7e-103 | 307 |
| LLPS-Orbr-2247 | Oryza brachyantha | 74.78 | 1e-99 | 299 |
| LLPS-Hov-0508 | Hordeum vulgare | 72.49 | 7e-92 | 280 |
| LLPS-Viv-1012 | Vitis vinifera | 71.37 | 9e-92 | 280 |
| LLPS-Thc-0422 | Theobroma cacao | 70.93 | 5e-92 | 280 |
| LLPS-Sot-0580 | Solanum tuberosum | 70.74 | 7e-91 | 277 |
| LLPS-Sol-1819 | Solanum lycopersicum | 70.48 | 1e-90 | 277 |
| LLPS-Vir-1263 | Vigna radiata | 70.48 | 1e-91 | 279 |
| LLPS-Nia-2031 | Nicotiana attenuata | 70.48 | 4e-91 | 278 |
| LLPS-Phv-1882 | Phaseolus vulgaris | 70.04 | 2e-91 | 279 |
| LLPS-Via-2387 | Vigna angularis | 69.6 | 6e-89 | 272 |
| LLPS-Glm-0762 | Glycine max | 69.3 | 3e-91 | 278 |
| LLPS-Mua-2357 | Musa acuminata | 69.16 | 6e-89 | 272 |
| LLPS-Gor-1827 | Gossypium raimondii | 69.16 | 9e-90 | 275 |
| LLPS-Met-2011 | Medicago truncatula | 68.72 | 2e-89 | 274 |
| LLPS-Tru-2095 | Triticum urartu | 68.27 | 2e-84 | 265 |