LLPS-Zem-1613
103647984
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Transcriptional corepressor SEUSS |
| Gene Name: | 103647984, ZEAMMB73_Zm00001d007295 |
| Ensembl Gene: | Zm00001d007295 |
| Ensembl Protein: | Zm00001d007295_P002 |
| Organism: | Zea mays |
| Taxa ID: | 4577 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Zm00001d007295_T002 | Zm00001d007295_P002 |
| Ensembl | Zm00001d007295_T005 | Zm00001d007295_P005 |
| Ensembl | Zm00001d007295_T008 | Zm00001d007295_P008 |
| Ensembl | Zm00001d007295_T001 | Zm00001d007295_P001 |
| Ensembl | Zm00001d007295_T003 | Zm00001d007295_P003 |
| Ensembl | Zm00001d007295_T004 | Zm00001d007295_P004 |
| Ensembl | Zm00001d007295_T006 | Zm00001d007295_P006 |
| Ensembl | Zm00001d007295_T009 | Zm00001d007295_P009 |
| Ensembl | Zm00001d007295_T007 | Zm00001d007295_P007 |
| UniProt | A0A1D6F598, A0A1D6F598_MAIZE | |
| GeneBank | CM007648 | ONM26470.1, ONM26471.1, ONM26475.1 |
| RefSeq | XM_008672496.1 | XP_008670718.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MMPSGPPNPM GHGQPVGGAA PSLLRTSSSL LSGGGQPGMG GGGGGMLSSQ SPFSSLVSPR 60 61 TQFGGNGLLG GASLLNRPPF GNGGPMPGPG SMQAVGMQMS TLQQRAGLDG ASDFISAEGS 120 121 DPLSFPSSSQ VNLGNQMGSD NLQATSQQQQ QQMDAMQDMQ QQLPMSYNQQ QLPPQHSQQL 180 181 QQPQATVKLE NGGSMISIKP EQQMAQPDQM MRSASGVKLE PQQLQAQMMR SLSSVKMEQQ 240 241 TSDSSAFLQQ QQQQQHLLQL TKQIRNCPEL VSIGGPNAIA NPQAATAAQL TLLQQQRLLH 300 301 MQQQQQQQIL KNLPLQRNQL QQQQQHQQQQ QLLRQQSLNM RTPGKSSPYE PGTCAKRLTH 360 361 YMYHQQNRPQ DNNIEYWRNF VNEYFAPNAK KRWCVSLYGS GRQTTGVFPQ DVWHCEICNR 420 421 KPGRGFETTV EVLPRLCQIK YASGTLEELL YIDMPRESQN TSGQIILDYT KAIQESVFEQ 480 481 LRVVREGHLR IVFNPDLKIA SWEFCARRHE ELVPRRSIIP QVSNLGAAVQ KYQAATQNST 540 541 SLSAQDMQNN CNSFVACARQ LAKALEVPLV NDLGYTKRYV RCLQIAEVVN CMKDLIDHSR 600 601 QTGSGPIDSL HNLPRRTPSG ASTLQPQQQQ TEEKQAIPQS SNQSGQNSAP MAGVQPSASA 660 661 NGDVTSNVTL SCAPSTSAPS PSVVGLLQNS MNSRQDHAMS SNNGGPYSGG NVAIPKVNST 720 721 SSLHSNPPTS FPSPAPTTSN NSMMPAPQNT NQLSSPTTSP SIPPMQPPAA RPQEAEPSDS 780 781 QSSVQKILQD LMSSQMNGVG HSGNDTKTPN GLTHGANGVN CLLGNAAANN SGIGGMGFGA 840 841 MSGFGHGMRT AMANNPMAMG ARMGMNHGAH DLSQLGQLQH QQQHQQQHDI GSQLLGGFRS 900 901 GNSFNNMQYD WKPSQ 915 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAAGGATT TGATTGATCA CAGCAGGCAG ACTGGATCTG GACCCATTGA TAGCCTGCAT 60 61 AACTTGCCAC GGAGGACACC TTCAGGGGCC AGCACTCTTC AACCACAGCA GCAGCAAACT 120 121 GAGGAGAAGC AGGCCATTCC CCAGAGTTCA AACCAGAGTG GTCAAAATTC TGCTCCTATG 180 181 GCTGGTGTGC AGCCTTCTGC CTCTGCCAAT GGTGATGTGA CATCAAATGT TACTCTCAGT 240 241 TGTGCACCTT CTACATCTGC GCCTTCACCA TCAGTTGTTG GGCTCTTGCA AAATTCAATG 300 301 AATTCTAGAC AAGACCATGC AATGAGCAGC AACAACGGTG GTCCATATAG TGGAGGCAAT 360 361 GTGGCTATTC CGAAGGTGAA CTCTACAAGC TCGCTGCACT CAAACCCACC TACATCTTTC 420 421 CCTTCCCCAG CACCGACAAC GTCCAATAAT AGCATGATGC CCGCTCCTCA AAATACAAAT 480 481 CAACTAAGCT CCCCAACGAC ATCACCAAGC ATACCTCCGA TGCAGCCACC TGCTGCTCGG 540 541 CCTCAGGAGG CCGAGCCAAG TGACTCGCAA AGCTCGGTTC AGAAGATCTT GCAAGACCTG 600 601 ATGTCGTCGC AGATGAATGG TGTTGGCCAC TCGGGGAATG ACACGAAGAC ACCGAACGGA 660 661 CTAACCCATG GTGCTAATGG GGTTAACTGC TTACTCGGCA ATGCTGCCGC GAATAACTCG 720 721 GGGATAGGAG GAATGGGATT TGGCGCCATG AGCGGGTTCG GTCATGGGAT GAGGACGGCA 780 781 ATGGCGAACA ATCCGATGGC GATGGGTGCA AGGATGGGAA TGAACCACGG TGCACACGAC 840 841 CTATCGCAGC TGGGTCAGCT ACAGCACCAG CAGCAACATC AGCAGCAGCA TGACATAGGA 900 901 AGCCAGCTGC TGGGCGGATT TAGATCAGGG AACAGCTTCA ATAACATGCA GTATGACTGG 960 961 AAACCCTCAC AATAG 975 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Lep-0764 | Leersia perrieri | 81.02 | 0.0 | 762 |
| LLPS-Orbr-1468 | Oryza brachyantha | 80.81 | 0.0 | 763 |
| LLPS-Arl-2921 | Arabidopsis lyrata | 79.64 | 1e-146 | 463 |
| LLPS-Art-0340 | Arabidopsis thaliana | 79.64 | 2e-146 | 463 |
| LLPS-Met-2620 | Medicago truncatula | 79.21 | 2e-158 | 495 |
| LLPS-Orp-0770 | Oryza punctata | 79.19 | 0.0 | 752 |
| LLPS-Hea-1348 | Helianthus annuus | 78.72 | 2e-157 | 491 |
| LLPS-Orr-1728 | Oryza rufipogon | 78.67 | 0.0 | 750 |
| LLPS-Ors-2134 | Oryza sativa | 78.41 | 0.0 | 749 |
| LLPS-Brn-1445 | Brassica napus | 78.37 | 1e-147 | 463 |
| LLPS-Bro-2366 | Brassica oleracea | 78.37 | 9e-148 | 463 |
| LLPS-Brr-0264 | Brassica rapa | 78.37 | 1e-147 | 463 |
| LLPS-Tra-1358 | Triticum aestivum | 78.29 | 0.0 | 749 |
| LLPS-Orni-1607 | Oryza nivara | 78.02 | 0.0 | 748 |
| LLPS-Brd-2380 | Brachypodium distachyon | 77.47 | 0.0 | 695 |
| LLPS-Ori-2181 | Oryza indica | 77.34 | 0.0 | 746 |
| LLPS-Vir-0819 | Vigna radiata | 76.9 | 1e-153 | 485 |
| LLPS-Hov-1970 | Hordeum vulgare | 76.63 | 0.0 | 740 |
| LLPS-Org-2179 | Oryza glaberrima | 76.03 | 0.0 | 741 |
| LLPS-Orb-2135 | Oryza barthii | 75.87 | 0.0 | 740 |
| LLPS-Sei-0770 | Setaria italica | 74.18 | 0.0 | 695 |
| LLPS-Orgl-1933 | Oryza glumaepatula | 74.03 | 5e-140 | 440 |
| LLPS-Sob-0719 | Sorghum bicolor | 72.29 | 0.0 | 670 |
| LLPS-Viv-0930 | Vitis vinifera | 68.38 | 2e-160 | 501 |
| LLPS-Nia-2018 | Nicotiana attenuata | 66.58 | 7e-160 | 499 |
| LLPS-Thc-2310 | Theobroma cacao | 66.4 | 1e-158 | 497 |
| LLPS-Cus-0562 | Cucumis sativus | 66.21 | 5e-156 | 489 |
| LLPS-Mua-2379 | Musa acuminata | 59.59 | 0.0 | 564 |
| LLPS-Phv-0809 | Phaseolus vulgaris | 58.95 | 4e-160 | 500 |
| LLPS-Gor-2222 | Gossypium raimondii | 55.04 | 1e-169 | 525 |
| LLPS-Prp-0011 | Prunus persica | 54.72 | 4e-163 | 508 |
| LLPS-Via-0893 | Vigna angularis | 54.55 | 4e-170 | 526 |
| LLPS-Pot-1411 | Populus trichocarpa | 54.42 | 2e-165 | 514 |
| LLPS-Glm-2534 | Glycine max | 53.64 | 6e-167 | 518 |
| LLPS-Mae-1982 | Manihot esculenta | 53.38 | 5e-166 | 515 |
| LLPS-Coc-1324 | Corchorus capsularis | 53.25 | 1e-163 | 509 |
| LLPS-Dac-1722 | Daucus carota | 52.19 | 4e-163 | 504 |
| LLPS-Sol-2107 | Solanum lycopersicum | 51.55 | 7e-162 | 504 |
| LLPS-Sem-2286 | Selaginella moellendorffii | 51.32 | 4e-91 | 315 |
| LLPS-Amt-1663 | Amborella trichopoda | 50.17 | 2e-153 | 483 |
| LLPS-Php-2332 | Physcomitrella patens | 46.59 | 2e-78 | 282 |
| LLPS-Yal-1582 | Yarrowia lipolytica | 24.06 | 7e-11 | 70.1 |