DrLLPS - Data resource of LLPS

LLPS-Zem-1346
ZEAMMB73_Zm00001d033928

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Cyclin-H1-1
Gene Name:	ZEAMMB73_Zm00001d033928
Ensembl Gene:	Zm00001d033928
Ensembl Protein:	Zm00001d033928_P002
Organism:	Zea mays
Taxa ID:	4577
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle, Nucleolus	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Mus musculus	LLPS-Mum-2405	Q61458	Client	Nuclear speckle	82.83	9e-122	352
Arabidopsis thaliana	LLPS-Art-0061	Q8W5S1	Client	Nucleolus	56.82	3e-123	366

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	Zm00001d033928_T002	Zm00001d033928_P002
Ensembl	Zm00001d033928_T010	Zm00001d033928_P010
Ensembl	Zm00001d033928_T003	Zm00001d033928_P003
Ensembl	Zm00001d033928_T001	Zm00001d033928_P001
Ensembl	Zm00001d033928_T007	Zm00001d033928_P007
Ensembl	Zm00001d033928_T008	Zm00001d033928_P008
Ensembl	Zm00001d033928_T004	Zm00001d033928_P004
Ensembl	Zm00001d033928_T009	Zm00001d033928_P009
Ensembl	Zm00001d033928_T005	Zm00001d033928_P005
Ensembl	Zm00001d033928_T006	Zm00001d033928_P006
UniProt		C0PCJ0, C0PCJ0_MAIZE
GeneBank	CM007647, BT066009	ACN31885.1, ONM08946.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MADFRTSTQR ERWIFQSHDL MERWAAANQR AAQTLAQYGT TRLNVDLLDG SVSYPESMPD 60 61 HVEGSSVVKP LSYEEEQLTR VFYEQKIQEV CAAFKFPHKI QATAIIYFKR FYLQWSVMEH 120 121 QPKHIMLTCV YASCKVEENH VSAEELGKGI QQDHQIILNN EMILLKTLDF DLIVYAPYRS 180 181 IEGFIDDLED FCRAGNGPFQ RLKELRQAAI SHVDKMMLTD APLLYTPGQL ALAALHKSND 240 241 LLRVVDFERY LEIIFSRQHS DCPIEQFVQS INEINYLVDQ LNIPTVKDMR HVDRKLKHCW 300 301 DPSSHDEHNK KKEKKSKHKS KRTSTDAQL 329
Nucleotide CDS Sequence (FASTA)
1 ATGGCTGATT TCCGGACCTC CACCCAACGG GAGAGGTGGA TCTTCCAGTC GCACGATTTG 60 61 ATGGAGAGGT GGGCGGCGGC AAACCAGCGG GCCGCTCAGA CCCTTGCGCA GTATGGGACG 120 121 ACCCGGCTTA ATGTGGACCT GCTTGATGGC TCGGTATCCT ACCCAGAGTC CATGCCGGAT 180 181 CATGTTGAGG GTAGCTCGGT TGTAAAGCCT CTTTCTTACG AAGAGGAGCA ATTGACAAGG 240 241 GTATTTTACG AGCAGAAGAT TCAGGAAGTA TGCGCTGCAT TCAAGTTCCC TCACAAAATC 300 301 CAGGCTACAG CAATAATATA TTTCAAGAGA TTCTATCTAC AATGGTCTGT AATGGAGCAT 360 361 CAACCAAAGC ATATTATGTT AACATGTGTA TATGCTTCTT GCAAAGTGGA AGAAAACCAT 420 421 GTTTCTGCTG AGGAACTTGG TAAAGGAATT CAGCAGGACC ACCAGATCAT TCTAAATAAT 480 481 GAGATGATTC TTCTTAAAAC TTTAGATTTT GATCTCATTG TTTATGCTCC ATATCGATCG 540 541 ATTGAAGGAT TTATTGATGA CCTAGAGGAT TTCTGCAGGG CAGGTAATGG TCCATTCCAG 600 601 CGTTTGAAGG AGTTGCGCCA GGCTGCTATA TCCCATGTTG ACAAAATGAT GTTGACTGAT 660 661 GCACCTCTTC TCTATACCCC TGGGCAGTTG GCACTGGCGG CTCTTCACAA GTCTAATGAT 720 721 CTTCTCAGGG TCGTCGATTT TGAAAGATAC TTGGAAATTA TCTTCTCAAG GCAACATTCT 780 781 GATTGTCCAA TCGAACAGTT TGTTCAGTCG ATCAACGAAA TCAATTACTT AGTCGACCAG 840 841 CTTAATATAC CTACTGTCAA AGACATGAGA CACGTGGACC GCAAGCTGAA ACATTGCTGG 900 901 GATCCAAGCT CACATGACGA GCATAACAAG AAGAAAGAAA AGAAGTCAAA GCACAAATCG 960 961 AAAAGAACAT CTACCGATGC CCAACTATAG 990

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Sob-1434	Sorghum bicolor	93.62	0.0	586
LLPS-Sei-0371	Setaria italica	87.23	0.0	532
LLPS-Orbr-1286	Oryza brachyantha	84.44	0.0	518
LLPS-Ors-1339	Oryza sativa	84.11	0.0	523
LLPS-Org-0864	Oryza glaberrima	84.11	0.0	523
LLPS-Ori-1500	Oryza indica	84.11	0.0	523
LLPS-Lep-0408	Leersia perrieri	83.44	0.0	517
LLPS-Brd-2048	Brachypodium distachyon	83.11	0.0	513
LLPS-Orp-1681	Oryza punctata	80.46	2e-170	484
LLPS-Orm-0148	Oryza meridionalis	80.46	2e-170	484
LLPS-Orni-2144	Oryza nivara	80.46	5e-171	485
LLPS-Orb-0900	Oryza barthii	80.46	5e-171	485
LLPS-Orr-0412	Oryza rufipogon	80.13	5e-170	483
LLPS-Orgl-0472	Oryza glumaepatula	80.13	5e-170	483
LLPS-Tra-1882	Triticum aestivum	78.48	6e-175	496
LLPS-Hov-1324	Hordeum vulgare	75.69	4e-158	456
LLPS-Tru-0130	Triticum urartu	73.37	4e-72	228
LLPS-Phv-1133	Phaseolus vulgaris	68.53	2e-114	338
LLPS-Mua-0734	Musa acuminata	66.45	5e-139	404
LLPS-Viv-0476	Vitis vinifera	64.26	3e-134	392
LLPS-Thc-1581	Theobroma cacao	63.12	2e-127	379
LLPS-Via-0316	Vigna angularis	61.72	4e-125	369
LLPS-Hea-1609	Helianthus annuus	61.57	1e-115	344
LLPS-Amt-1732	Amborella trichopoda	61.44	1e-121	362
LLPS-Dac-0193	Daucus carota	61.39	1e-123	365
LLPS-Gor-0931	Gossypium raimondii	61.04	9e-124	366
LLPS-Mae-1718	Manihot esculenta	60.73	7e-127	374
LLPS-Prp-1984	Prunus persica	60.73	4e-124	367
LLPS-Coc-0626	Corchorus capsularis	60.64	4e-112	335
LLPS-Nia-1110	Nicotiana attenuata	59.8	1e-117	350
LLPS-Met-1244	Medicago truncatula	59.74	8e-123	363
LLPS-Sot-0947	Solanum tuberosum	59.21	4e-116	346
LLPS-Glm-2610	Glycine max	58.77	5e-116	346
LLPS-Bro-1425	Brassica oleracea	58.47	1e-118	352
LLPS-Sol-0355	Solanum lycopersicum	58.22	2e-115	344
LLPS-Pot-2348	Populus trichocarpa	58.09	2e-124	367
LLPS-Cus-2187	Cucumis sativus	58.09	1e-116	347
LLPS-Brr-1420	Brassica rapa	57.14	1e-112	337
LLPS-Art-0061	Arabidopsis thaliana	57.0	6e-115	344
LLPS-Arl-2712	Arabidopsis lyrata	56.67	4e-116	346
LLPS-Brn-3008	Brassica napus	56.48	4e-111	333
LLPS-Php-1150	Physcomitrella patens	55.74	4e-105	319
LLPS-Sem-1961	Selaginella moellendorffii	54.93	2e-105	318
LLPS-Vir-0548	Vigna radiata	52.98	5e-90	281
LLPS-Xet-0458	Xenopus tropicalis	40.23	1e-28	118
LLPS-Cas-1207	Carlito syrichta	40.11	5e-31	122
LLPS-Osl-0571	Ostreococcus lucimarinus	37.23	3e-45	160
LLPS-Orc-0903	Oryctolagus cuniculus	36.29	7e-34	132
LLPS-Otg-0660	Otolemur garnettii	36.29	5e-34	132
LLPS-Chs-2372	Chlorocebus sabaeus	36.29	9e-34	132
LLPS-Rhb-0007	Rhinopithecus bieti	35.86	4e-33	130
LLPS-Man-2612	Macaca nemestrina	35.86	4e-33	130
LLPS-Nol-2273	Nomascus leucogenys	35.86	4e-33	130
LLPS-Mam-4256	Macaca mulatta	35.86	4e-33	130
LLPS-Poa-2493	Pongo abelii	35.86	3e-33	130
LLPS-Caj-1727	Callithrix jacchus	35.86	3e-33	131
LLPS-Cea-1103	Cercocebus atys	35.86	4e-33	130
LLPS-Aon-0570	Aotus nancymaae	35.86	3e-33	130
LLPS-Maf-1140	Macaca fascicularis	35.86	4e-33	130
LLPS-Mea-2392	Mesocricetus auratus	35.86	1e-33	131
LLPS-Mal-2547	Mandrillus leucophaeus	35.86	4e-33	130
LLPS-Paa-2634	Papio anubis	35.83	6e-34	132
LLPS-Fud-0664	Fukomys damarensis	35.74	2e-32	128
LLPS-Cap-1149	Cavia porcellus	35.59	2e-33	130
LLPS-Caf-2420	Canis familiaris	35.55	1e-28	117
LLPS-Hos-3380	Homo sapiens	35.44	1e-32	128
LLPS-Pat-2242	Pan troglodytes	35.44	1e-32	128
LLPS-Pap-1156	Pan paniscus	35.44	1e-32	128
LLPS-Ict-2469	Ictidomys tridecemlineatus	35.44	8e-33	129
LLPS-Gog-3422	Gorilla gorilla	35.44	1e-32	129
LLPS-Myl-1714	Myotis lucifugus	35.44	1e-32	129
LLPS-Dio-2552	Dipodomys ordii	35.44	4e-33	130
LLPS-Urm-2239	Ursus maritimus	35.32	4e-33	130
LLPS-Fec-3906	Felis catus	35.32	2e-33	131
LLPS-Mum-2405	Mus musculus	35.32	8e-32	126
LLPS-Aim-1090	Ailuropoda melanoleuca	35.32	2e-33	130
LLPS-Eqc-1837	Equus caballus	35.02	3e-32	127
LLPS-Ran-2314	Rattus norvegicus	35.02	3e-32	127
LLPS-Mod-3118	Monodelphis domestica	34.89	4e-32	127
LLPS-Ova-4347	Ovis aries	34.8	2e-32	128
LLPS-Bot-0743	Bos taurus	34.8	3e-32	128
LLPS-Ora-1011	Ornithorhynchus anatinus	34.75	3e-31	124
LLPS-Sah-3729	Sarcophilus harrisii	34.73	7e-33	129
LLPS-Mup-0234	Mustela putorius furo	34.62	7e-33	129
LLPS-Sus-2908	Sus scrofa	34.6	2e-33	130
LLPS-Tag-1840	Taeniopygia guttata	33.9	5e-33	130
LLPS-Anp-1578	Anas platyrhynchos	33.65	3e-27	112
LLPS-Pof-2668	Poecilia formosa	32.77	4e-30	121
LLPS-Xim-3831	Xiphophorus maculatus	32.77	2e-30	122
LLPS-Gaga-3069	Gallus gallus	32.47	7e-36	137
LLPS-Tar-3945	Takifugu rubripes	32.45	4e-12	69.7
LLPS-Cii-0198	Ciona intestinalis	32.16	1e-25	108
LLPS-Dar-2363	Danio rerio	32.08	4e-31	124
LLPS-Drm-1222	Drosophila melanogaster	31.89	2e-28	117
LLPS-Sac-1169	Saccharomyces cerevisiae	31.77	6e-22	99.0
LLPS-Icp-4063	Ictalurus punctatus	31.76	2e-30	122
LLPS-Asg-0875	Ashbya gossypii	31.75	2e-23	103
LLPS-Scm-0977	Scophthalmus maximus	31.65	1e-32	129
LLPS-Orl-1565	Oryzias latipes	31.38	6e-12	68.9
LLPS-Gaa-0351	Gasterosteus aculeatus	31.38	7e-12	68.9
LLPS-Abg-0978	Absidia glauca	31.36	1e-11	68.9
LLPS-Asm-3020	Astyanax mexicanus	31.3	1e-29	120
LLPS-Chr-0733	Chlamydomonas reinhardtii	31.21	2e-15	78.6
LLPS-Loa-3230	Loxodonta africana	31.2	5e-25	107
LLPS-Kop-0758	Komagataella pastoris	31.17	3e-27	114
LLPS-Zyt-1169	Zymoseptoria tritici	30.99	1e-09	62.8
LLPS-Cae-1440	Caenorhabditis elegans	30.88	4e-16	81.6
LLPS-Orn-0175	Oreochromis niloticus	30.85	1e-11	68.2
LLPS-Pes-2835	Pelodiscus sinensis	30.72	2e-33	132
LLPS-Anc-2985	Anolis carolinensis	30.52	4e-34	133
LLPS-Gas-0513	Galdieria sulphuraria	30.43	1e-21	98.2
LLPS-Lac-2652	Latimeria chalumnae	30.09	9e-12	68.6
LLPS-Leo-1944	Lepisosteus oculatus	30.09	7e-12	68.9
LLPS-Scf-1226	Scleropages formosus	30.09	8e-12	68.9
LLPS-Nec-0297	Neurospora crassa	29.51	1e-11	68.9
LLPS-Pug-1164	Puccinia graminis	29.5	3e-23	102
LLPS-Ten-2711	Tetraodon nigroviridis	29.18	5e-28	115
LLPS-Spr-0720	Sporisorium reilianum	29.03	9e-15	78.6
LLPS-Mao-1369	Magnaporthe oryzae	28.63	7e-15	78.6
LLPS-Scj-0614	Schizosaccharomyces japonicus	28.16	5e-22	98.2
LLPS-Aso-1111	Aspergillus oryzae	28.07	6e-14	75.9
LLPS-Usm-0201	Ustilago maydis	27.87	1e-17	87.4
LLPS-Trr-0556	Trichoderma reesei	27.71	2e-12	71.2
LLPS-Mel-0932	Melampsora laricipopulina	27.71	1e-19	91.7
LLPS-Asn-1232	Aspergillus nidulans	27.66	2e-14	77.8
LLPS-Miv-0286	Microbotryum violaceum	27.6	9e-24	103
LLPS-Asf-0080	Aspergillus flavus	27.6	1e-14	78.2
LLPS-Yal-0028	Yarrowia lipolytica	27.54	7e-17	84.3
LLPS-Dos-1266	Dothistroma septosporum	27.15	2e-19	90.9
LLPS-Trv-0396	Trichoderma virens	27.11	2e-12	71.2
LLPS-Scs-0778	Sclerotinia sclerotiorum	26.78	3e-10	65.1
LLPS-Ast-1216	Aspergillus terreus	26.76	7e-13	72.8
LLPS-Cogr-1575	Colletotrichum graminicola	26.52	3e-12	71.2
LLPS-Scp-1105	Schizosaccharomyces pombe	26.47	4e-17	84.0
LLPS-Ved-0440	Verticillium dahliae	26.42	5e-13	73.2
LLPS-Scc-0460	Schizosaccharomyces cryophilus	26.05	5e-16	81.3
LLPS-Crn-0631	Cryptococcus neoformans	25.97	1e-20	95.9
LLPS-Beb-1545	Beauveria bassiana	25.7	4e-10	64.3
LLPS-Put-0862	Puccinia triticina	25.59	4e-14	75.5
LLPS-Blg-0669	Blumeria graminis	25.08	2e-19	91.7
LLPS-Nef-0873	Neosartorya fischeri	24.56	3e-12	71.2
LLPS-Cog-0761	Colletotrichum gloeosporioides	24.48	1e-11	68.9
LLPS-Asc-0939	Aspergillus clavatus	24.4	5e-14	76.6
LLPS-Gag-0892	Gaeumannomyces graminis	23.98	4e-10	64.3
LLPS-Asfu-1257	Aspergillus fumigatus	23.84	6e-12	70.1
LLPS-Coo-0360	Colletotrichum orbiculare	23.64	6e-10	63.9

LLPS-Zem-1346ZEAMMB73_Zm00001d033928

Protein Sequence

Nucleotide Sequence

LLPS-Zem-1346
ZEAMMB73_Zm00001d033928