LLPS-Zem-0864
103649879
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | DExH-box ATP-dependent RNA helicase DExH3 |
| Gene Name: | 103649879, ZEAMMB73_Zm00001d040082 |
| Ensembl Gene: | Zm00001d040082 |
| Ensembl Protein: | Zm00001d040082_P027 |
| Organism: | Zea mays |
| Taxa ID: | 4577 |
| LLPS Type: | LLPS regulator |
▼ PROPERTY
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus, P-body, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MALTMVTFVL RFTHPCACAG PRCSCRCVRR DTTPQTPLVS DLPSHYQGLL TPFLTAIRHP 60 61 ILSFETRVAA ARRHSPDHAA QSPSRFYAGV SVFSRSADPQ SLTLQRRTLR RAGFPRRAQS 120 121 SGTGGGLHET CEPAVAATAL VVMLLTSVLR GRVRLLHRHR SLTMPSPLFL SRNPNTSLGT 180 181 TNPHLSSPPV SAAMSTTGVY VPPMRRLRSV IASTNGSLAP PPSAAAQAQQ TRTPEWLVDG 240 241 RSLSPQSPPQ LRRRDIPPLP RPPLPEHYRQ QSAGFARYAY DDFSEDDSDK DIDRTSVSSK 300 301 GASTLDNVDE WKWKLHMLLR NDDEQEIISR ERKDRRDFEQ LAQLADRMRL HSRQYSRVVV 360 361 FSKVPLPNYR SDLDDKRPQR EVSIPAGLQR EVDALLAGYV ARKGTYIGNF PSSAFSRSSS 420 421 TDSFATDEGF FEQQDNQTST SAVMDRIQRR KSLQLRNQQA AWQESNDGQS MMEFRRSLPA 480 481 YKEKQTLLEA ISQNQVIVVS GETGCGKTTQ LPQYILESEI DAARGATCSI ICTQPRRISA 540 541 IAVSERVAAE RGEKIGESVC ARRDIQTKIV RTKWWKLKGE VQRSIREKKE CYRHLYYDRS 600 601 VNNIDKYKVT KNTAKRANVG LQKDDMVGYK VRLEGMRGRD TRLLFCTTGV LLRRLLVDRN 660 661 LKGVTHVIVD EIHERGMNED FLLIVLKDLL PRRPELRLIL MSATLNAELF SSYFGGAPMI 720 721 HIPGFTYPVR SHFLEDILEI TGHWLTPYNQ IDDYGQEKSW KMQKQALQKR KSQIASVVEE 780 781 RSGAILVFMT GWDDINALKE QLQANPLLGN PSAVLLLACH GSMASSEQKL IFDKPEPGVR 840 841 KIVLATNLAE TSITINDVVF VVDCGKAKET SYDALNNTPC LLPTWISKAS ARQRRGRAGR 900 901 VQPGECYHLY PRCVYDAFAD YQLPELLRTP LQSLCLQIKS LRLGSISEFL SRALQSPESL 960 961 SVQNAIEYLK VIGAFDQNEE LTVLGKHLSM LPVEPKLGKM LIFGAIFNCL DPILTIVSGL 1020 1021 SVRDPFLTPF DKKDLAESAK LQFSCRDYSD HLALVRAYDG WREAERDRAG YDYCWKNFLS 1080 1081 VQTLKAIDSL RRQFLFLLKD TGLVDENMTM CNKWSRDENL VRAVICAGLY PGVSSVLNKE 1140 1141 KSISLKTMED GQVMLYSSSV NGKETKIPFP WLVFNEKVKV NSVFLRDSTA ISDSILLLFG 1200 1201 GCIKQGGLDG HLKMLGGYLE FFMNRDLAST YVSLKRELEN LIHCKLQNPR MDIQTSEELL 1260 1261 SAIRLLVTED PCSGRFVYGR QEPRSKKAKT MLSPSSLSEA GGNGGDNAKN QLQTYLTRAG 1320 1321 HSNPTYKTKQ IKSYLFRSTV EFNGMQFVGQ PCANKKLAEK DAASEALNWL TGDGGAITDS 1380 1381 RGAQDADPMS LLMQPPRRRR HSHRRRN 1407 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAGCACCA CCGGAGTCTA CGTGCCGCCG ATGCGGCGGC TCCGCTCCGT TATCGCGTCC 60 61 ACCAACGGGA GCCTTGCGCC ACCACCGTCC GCCGCGGCGC AGGCACAGCA GACGCGGACG 120 121 CCAGAGTGGC TGGTGGACGG GCGTTCGCTC AGCCCCCAGT CGCCGCCTCA GCTGCGGCGG 180 181 CGCGATATAC CTCCCTTGCC GAGGCCACCC CTGCCAGAGC ATTACCGGCA GCAGAGCGCT 240 241 GGGTTTGCCC GCTATGCATA CGATGATTTC TCTGAGGATG ACTCAGATAA GGACATTGAC 300 301 CGCACGTCAG TTTCGAGCAA GGGTGCATCT ACTTTAGATA ATGTTGATGA ATGGAAATGG 360 361 AAACTGCATA TGCTTCTTCG TAATGATGAT GAACAAGAGA TTATCTCAAG GGAAAGAAAG 420 421 GATAGGCGAG ATTTTGAACA ACTCGCCCAA TTGGCTGACA GAATGCGCTT GCACAGCCGT 480 481 CAGTATTCTA GAGTTGTTGT GTTCAGTAAG GTTCCATTGC CTAATTATAG ATCAGATCTT 540 541 GATGATAAAA GACCCCAAAG AGAGGTATCT ATACCTGCTG GCTTGCAAAG AGAGGTTGAT 600 601 GCTCTGCTTG CAGGCTATGT TGCACGGAAG GGAACATACA TTGGCAACTT TCCTAGTTCA 660 661 GCTTTCTCAC GATCAAGCAG CACAGACAGT TTTGCAACTG ATGAAGGCTT CTTTGAGCAG 720 721 CAAGATAATC AAACTTCCAC TAGTGCTGTA ATGGACAGAA TCCAAAGAAG GAAAAGCCTG 780 781 CAGTTGCGGA ATCAGCAGGC TGCTTGGCAG GAATCAAATG ATGGCCAAAG CATGATGGAG 840 841 TTTCGTCGCA GTCTTCCTGC TTATAAAGAG AAGCAAACTT TATTGGAAGC TATATCACAG 900 901 AATCAGGTCA TTGTAGTTTC AGGCGAGACT GGCTGTGGTA AGACGACACA ACTACCACAG 960 961 TACATTTTAG AATCTGAAAT CGATGCTGCT CGTGGTGCTA CGTGCAGTAT TATTTGCACT 1020 1021 CAACCAAGGC GAATATCAGC AATTGCTGTG TCTGAAAGAG TCGCTGCTGA AAGAGGCGAG 1080 1081 AAAATTGGTG AATCGGTTGG CTACAAAGTT CGGCTGGAAG GCATGAGAGG AAGAGATACG 1140 1141 CGCCTTCTTT TCTGCACCAC TGGAGTCCTG TTGCGGAGAT TGTTGGTGGA CAGGAATTTG 1200 1201 AAAGGTGTTA CCCATGTTAT TGTTGATGAA ATCCATGAAA GAGGCATGAA TGAAGATTTT 1260 1261 CTTCTTATTG TCTTAAAGGA TCTTCTTCCA CGTCGCCCTG AGCTGAGGCT TATATTGATG 1320 1321 AGTGCAACCC TTAATGCTGA GCTATTCTCT TCATACTTTG GTGGAGCACC CATGATACAT 1380 1381 ATACCTGGTT TTACATATCC TGTCCGGAGT CATTTTCTGG AAGATATTCT TGAAATTACT 1440 1441 GGGCACTGGT TAACTCCATA CAATCAAATT GATGACTATG GTCAAGAAAA AAGTTGGAAG 1500 1501 ATGCAAAAGC AAGCTCTACA AAAGCGGAAG AGCCAAATCG CTTCTGTTGT GGAAGATGCT 1560 1561 GTTGAAGCTG CTGATTTGAG GGACTATAGT TCGCGAACTC GTGATTCCTT ATCCTGTTGG 1620 1621 AATCCTGATT CAATTGGTTT TAATTTAATA GAAAATGTCT TATGCCATAT TTGTCAAAAG 1680 1681 GAACGATCTG GTGCAATTCT TGTATTTATG ACTGGGTGGG ATGACATTAA TGCATTAAAA 1740 1741 GAGCAGCTCC AAGCAAATCC ATTGCTTGGA AATCCAAGCG CAGTTTTGTT GCTCGCTTGT 1800 1801 CATGGCTCTA TGGCCAGTTC AGAGCAGAAA TTAATATTTG ATAAGCCTGA GCCTGGAGTA 1860 1861 AGGAAAATAG TTCTTGCCAC GAATTTGGCT GAAACTAGTA TTACTATCAA CGATGTAGTT 1920 1921 TTTGTTGTTG ATTGTGGCAA AGCAAAAGAG ACATCTTACG ATGCACTGAA TAATACTCCC 1980 1981 TGTCTGCTTC CAACCTGGAT CTCCAAGGCT TCTGCCAGAC AAAGACGAGG ACGAGCTGGC 2040 2041 CGAGTCCAAC CAGGGGAGTG CTACCATCTT TATCCACGAT GTGTATATGA TGCATTTGCT 2100 2101 GACTACCAGT TACCAGAACT TCTTAGAACT CCTCTCCAGT CCCTCTGTTT GCAAATAAAA 2160 2161 AGCTTGAGGC TGGGAAGTAT ATCAGAATTT TTATCCAGAG CTTTACAATC ACCTGAATCT 2220 2221 CTATCAGTAC AAAATGCCAT TGAATATCTT AAAGTCATTG GAGCATTTGA TCAGAATGAA 2280 2281 GAATTGACGG TTCTTGGAAA GCACTTGTCT ATGCTTCCAG TTGAACCTAA GTTAGGAAAG 2340 2341 ATGCTTATTT TTGGGGCTAT TTTTAATTGT CTGGATCCCA TATTAACCAT AGTTTCTGGA 2400 2401 CTTAGTGTTA GAGATCCCTT TTTAACCCCC TTCGATAAGA AAGATCTTGC AGAGTCAGCT 2460 2461 AAGTTGCAGT TTTCATGCCG GGACTACAGT GATCATCTTG CACTTGTTCG TGCATATGAT 2520 2521 GGATGGAGGG AGGCTGAAAG AGACCGTGCT GGTTATGACT ACTGCTGGAA AAATTTTCTT 2580 2581 TCGGTGCAAA CATTGAAAGC AATAGATTCT CTTCGGCGGC AGTTTCTCTT TCTTCTGAAG 2640 2641 GATACTGGTT TGGTTGACGA AAACATGACT ATGTGCAATA AATGGAGTCG TGATGAAAAT 2700 2701 CTAGTTCGGG CGGTAATTTG TGCAGGACTG TATCCAGGTG TTTCCTCTGT TTTGAACAAG 2760 2761 GAGAAATCCA TCTCCCTCAA GACAATGGAA GATGGACAGG TTATGCTTTA TTCGAGTTCA 2820 2821 GTTAATGGTA AAGAAACCAA GATTCCATTC CCCTGGCTAG TTTTCAATGA GAAGGTGAAA 2880 2881 GTGAATTCTG TTTTCCTCCG GGATTCAACT GCTATATCTG ATTCTATACT GTTGTTATTC 2940 2941 GGAGGCTGCA TAAAACAAGG GGGCTTGGAT GGACACTTAA AAATGCTTGG AGGTTATCTT 3000 3001 GAGTTCTTCA TGAATCGCGA TCTTGCTTCA ACTTATGTGA GTTTGAAGAG CTGGTGA 3057 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Tra-2430 | Triticum aestivum | 84.78 | 0.0 | 1355 |
| LLPS-Amt-0087 | Amborella trichopoda | 74.17 | 0.0 | 1153 |
| LLPS-Phv-2267 | Phaseolus vulgaris | 72.53 | 0.0 | 1113 |
| LLPS-Coc-1661 | Corchorus capsularis | 72.16 | 0.0 | 1101 |
| LLPS-Glm-2042 | Glycine max | 71.65 | 0.0 | 1120 |
| LLPS-Hea-2117 | Helianthus annuus | 70.11 | 0.0 | 1093 |
| LLPS-Mae-1494 | Manihot esculenta | 66.37 | 0.0 | 1000 |
| LLPS-Prp-0475 | Prunus persica | 64.32 | 0.0 | 985 |
| LLPS-Gor-2537 | Gossypium raimondii | 64.24 | 0.0 | 996 |
| LLPS-Pot-1330 | Populus trichocarpa | 64.13 | 0.0 | 1300 |
| LLPS-Met-0427 | Medicago truncatula | 64.1 | 0.0 | 980 |
| LLPS-Arl-2503 | Arabidopsis lyrata | 63.81 | 0.0 | 972 |
| LLPS-Thc-1589 | Theobroma cacao | 63.75 | 0.0 | 986 |
| LLPS-Scm-1716 | Scophthalmus maximus | 63.25 | 1e-25 | 120 |
| LLPS-Bro-2455 | Brassica oleracea | 62.55 | 0.0 | 972 |
| LLPS-Brn-1542 | Brassica napus | 60.94 | 0.0 | 1252 |
| LLPS-Cii-0563 | Ciona intestinalis | 60.64 | 1e-28 | 126 |
| LLPS-Art-2637 | Arabidopsis thaliana | 59.73 | 0.0 | 1262 |
| LLPS-Orl-3134 | Oryzias latipes | 59.09 | 2e-25 | 119 |
| LLPS-Xim-0106 | Xiphophorus maculatus | 59.09 | 1e-25 | 119 |
| LLPS-Pof-2230 | Poecilia formosa | 59.09 | 9e-26 | 120 |
| LLPS-Poa-1040 | Pongo abelii | 58.33 | 2e-22 | 108 |
| LLPS-Mea-0922 | Mesocricetus auratus | 58.14 | 2e-23 | 112 |
| LLPS-Ora-0706 | Ornithorhynchus anatinus | 58.14 | 1e-23 | 113 |
| LLPS-Dio-0467 | Dipodomys ordii | 58.14 | 1e-22 | 109 |
| LLPS-Mod-2318 | Monodelphis domestica | 58.14 | 2e-23 | 112 |
| LLPS-Otg-0151 | Otolemur garnettii | 58.14 | 6e-23 | 110 |
| LLPS-Fia-0694 | Ficedula albicollis | 58.14 | 4e-23 | 111 |
| LLPS-Sah-2287 | Sarcophilus harrisii | 57.89 | 2e-24 | 115 |
| LLPS-Nol-2034 | Nomascus leucogenys | 57.83 | 3e-22 | 108 |
| LLPS-Maf-2381 | Macaca fascicularis | 56.98 | 7e-23 | 110 |
| LLPS-Chs-3348 | Chlorocebus sabaeus | 56.98 | 8e-23 | 110 |
| LLPS-Sus-1424 | Sus scrofa | 56.98 | 9e-23 | 110 |
| LLPS-Aon-1817 | Aotus nancymaae | 56.98 | 1e-22 | 109 |
| LLPS-Cea-3253 | Cercocebus atys | 56.98 | 7e-23 | 110 |
| LLPS-Gog-4804 | Gorilla gorilla | 56.98 | 1e-22 | 110 |
| LLPS-Fud-0231 | Fukomys damarensis | 56.98 | 1e-22 | 109 |
| LLPS-Caj-2625 | Callithrix jacchus | 56.98 | 1e-22 | 110 |
| LLPS-Bot-4526 | Bos taurus | 56.98 | 1e-22 | 109 |
| LLPS-Ran-1287 | Rattus norvegicus | 56.98 | 2e-22 | 108 |
| LLPS-Mal-3573 | Mandrillus leucophaeus | 56.98 | 7e-23 | 110 |
| LLPS-Aim-4348 | Ailuropoda melanoleuca | 56.98 | 1e-22 | 110 |
| LLPS-Mup-1840 | Mustela putorius furo | 56.98 | 9e-23 | 110 |
| LLPS-Ova-2653 | Ovis aries | 56.98 | 1e-22 | 109 |
| LLPS-Hos-2035 | Homo sapiens | 56.98 | 1e-22 | 110 |
| LLPS-Pat-4238 | Pan troglodytes | 56.98 | 1e-22 | 110 |
| LLPS-Urm-0274 | Ursus maritimus | 56.98 | 9e-23 | 110 |
| LLPS-Fec-1696 | Felis catus | 56.98 | 1e-22 | 110 |
| LLPS-Man-4834 | Macaca nemestrina | 56.98 | 7e-23 | 110 |
| LLPS-Orc-1695 | Oryctolagus cuniculus | 56.98 | 6e-23 | 110 |
| LLPS-Rhb-3042 | Rhinopithecus bieti | 56.98 | 8e-23 | 110 |
| LLPS-Caf-3116 | Canis familiaris | 56.98 | 2e-22 | 109 |
| LLPS-Eqc-2236 | Equus caballus | 56.98 | 2e-22 | 108 |
| LLPS-Mam-3531 | Macaca mulatta | 56.98 | 8e-23 | 110 |
| LLPS-Ict-3821 | Ictidomys tridecemlineatus | 56.98 | 1e-22 | 110 |
| LLPS-Sem-2152 | Selaginella moellendorffii | 56.89 | 0.0 | 832 |
| LLPS-Tag-2631 | Taeniopygia guttata | 56.82 | 5e-20 | 101 |
| LLPS-Lac-3189 | Latimeria chalumnae | 56.57 | 8e-25 | 117 |
| LLPS-Php-0381 | Physcomitrella patens | 56.47 | 4e-21 | 105 |
| LLPS-Paa-4282 | Papio anubis | 56.25 | 2e-26 | 122 |
| LLPS-Pap-2592 | Pan paniscus | 56.25 | 2e-26 | 122 |
| LLPS-Cap-4041 | Cavia porcellus | 56.25 | 2e-26 | 122 |
| LLPS-Mum-4477 | Mus musculus | 55.81 | 1e-22 | 109 |
| LLPS-Anc-1432 | Anolis carolinensis | 51.52 | 1e-21 | 107 |
| LLPS-Loa-3857 | Loxodonta africana | 50.94 | 1e-24 | 116 |
| LLPS-Icp-1605 | Ictalurus punctatus | 50.67 | 5e-16 | 88.6 |
| LLPS-Orn-2986 | Oreochromis niloticus | 50.47 | 1e-24 | 116 |
| LLPS-Ten-0586 | Tetraodon nigroviridis | 50.46 | 2e-25 | 119 |
| LLPS-Leo-0726 | Lepisosteus oculatus | 50.0 | 9e-21 | 103 |
| LLPS-Lep-1956 | Leersia perrieri | 50.0 | 2e-21 | 106 |
| LLPS-Dar-2928 | Danio rerio | 50.0 | 3e-24 | 115 |
| LLPS-Asm-1314 | Astyanax mexicanus | 48.78 | 6e-17 | 91.3 |
| LLPS-Ori-1605 | Oryza indica | 46.92 | 1e-155 | 504 |
| LLPS-Via-0345 | Vigna angularis | 46.73 | 9e-20 | 100 |
| LLPS-Meg-1642 | Meleagris gallopavo | 46.15 | 5e-19 | 98.2 |
| LLPS-Xet-0676 | Xenopus tropicalis | 45.78 | 1e-15 | 87.0 |
| LLPS-Dac-2169 | Daucus carota | 45.67 | 1e-22 | 110 |
| LLPS-Gaa-2464 | Gasterosteus aculeatus | 45.57 | 2e-13 | 80.1 |
| LLPS-Scf-1965 | Scleropages formosus | 45.35 | 4e-12 | 75.9 |
| LLPS-Gaga-1900 | Gallus gallus | 44.95 | 5e-19 | 98.2 |
| LLPS-Pes-3548 | Pelodiscus sinensis | 44.44 | 1e-19 | 100 |
| LLPS-Tar-2328 | Takifugu rubripes | 44.19 | 3e-14 | 82.4 |
| LLPS-Anp-0622 | Anas platyrhynchos | 43.36 | 3e-19 | 99.0 |
| LLPS-Tut-0841 | Tursiops truncatus | 42.21 | 2e-107 | 375 |
| LLPS-Cas-0393 | Carlito syrichta | 41.71 | 1e-106 | 373 |
| LLPS-Myl-4495 | Myotis lucifugus | 39.8 | 6e-15 | 85.1 |
| LLPS-Lem-0459 | Leptosphaeria maculans | 35.78 | 2e-94 | 339 |
| LLPS-Beb-0796 | Beauveria bassiana | 34.26 | 9e-102 | 361 |
| LLPS-Usm-1443 | Ustilago maydis | 33.04 | 8e-97 | 347 |