LLPS-Zem-0123
100303995
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | 60S ribosomal protein L23 |
Gene Name: | 100303995, ZEAMMB73_Zm00001d048368, ZEAMMB73_Zm00001d051929 |
Ensembl Gene: | Zm00001d048368 |
Ensembl Protein: | Zm00001d048368_P007 |
Organism: | Zea mays |
Taxa ID: | 4577 |
LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus, P-body, Others | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | Zm00001d048368_T007 | Zm00001d048368_P007 |
Ensembl | Zm00001d048368_T004 | Zm00001d048368_P004 |
Ensembl | Zm00001d048368_T003 | Zm00001d048368_P003 |
Ensembl | Zm00001d048368_T006 | Zm00001d048368_P006 |
Ensembl | Zm00001d048368_T005 | Zm00001d048368_P005 |
Ensembl | Zm00001d048368_T002 | Zm00001d048368_P002 |
Ensembl | Zm00001d048368_T001 | Zm00001d048368_P001 |
UniProt | B4FGL4, B4FGL4_MAIZE | |
GeneBank | EU961070, EU958754, EU967873, CM000780, EU965703, EU963050, EU953339, EU958884, EU962952, CM000785, EU961104, BT036252, BT062817, EU952486 | ACG37821.1, ACG33222.1, ACG35070.1, ACG33188.1, ACG39991.1, ACF81257.1, AQK55489.1, ACG24604.1, ACN27514.1, ACG31002.1, ACG25457.1, ACG35168.1, AQL09512.1, ACG30872.1 |
RefSeq | NM_001138952.1, NM_001139265.1, NM_001154870.1, NM_001155894.1, NM_001165531.1 | NP_001132424.1, NP_001132737.1, NP_001148342.1, NP_001149366.1, NP_001159003.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MSKRGRGGSA GNKFRMSLGL PVAATVNCAD NTGAKNLYII SVKGIKGRLN RLPSACVGDM 60 61 VMATVKKGKP DLRKKVMPAV IVRQRKPWRR KDGVYMYFED NAGVIVNPKG EMKGSAITGP 120 121 IGKECADLWP RIASAANAIV 140 |
Nucleotide CDS Sequence (FASTA) |
1 ATGTCGAAGC GAGGCAGGGG AGGTTCGGCG GGGAACAAGT TCCGCATGTC GCTGGGTCTG 60 61 CCAGTGGCCG CGACGGTGAA CTGCGCGGAC AACACCGGCG CCAAGAACCT CTACATCATC 120 121 TCCGTCAAGG GCATCAAGGG CCGCCTCAAT CGCCTCCCGT CCGCCTGCGT TGGCGACATG 180 181 GTCATGGCCA CCGTCAAGAA GGGGAAGCCC GACCTCAGGA AGAAGGTGAT GCCCGCCGTC 240 241 ATCGTCCGCC AGCGCAAGCC GTGGCGCCGC AAGGACGGGG TCTACATGTA CTTCGAAGAT 300 301 AATGCTGGAG TGATTGTGAA TCCCAAGGGT GAGATGAAAG GTTCCGCTAT CACTGGACCT 360 361 ATCGGCAAGG AGTGTGCTGA TCTTTGGCCT AGGATTGCTA GCGCAGCAAA CGCCATTGTT 420 421 TGA 423 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Orgl-0965 | Oryza glumaepatula | 100.0 | 1e-96 | 281 |
LLPS-Lep-0015 | Leersia perrieri | 100.0 | 1e-96 | 281 |
LLPS-Mua-0382 | Musa acuminata | 100.0 | 1e-96 | 281 |
LLPS-Orni-1413 | Oryza nivara | 100.0 | 1e-96 | 281 |
LLPS-Ori-1012 | Oryza indica | 100.0 | 1e-96 | 281 |
LLPS-Orb-0333 | Oryza barthii | 100.0 | 1e-96 | 281 |
LLPS-Org-0348 | Oryza glaberrima | 100.0 | 1e-96 | 281 |
LLPS-Orm-0638 | Oryza meridionalis | 100.0 | 1e-96 | 281 |
LLPS-Orr-0731 | Oryza rufipogon | 100.0 | 1e-96 | 281 |
LLPS-Orbr-1563 | Oryza brachyantha | 100.0 | 1e-96 | 281 |
LLPS-Mae-0661 | Manihot esculenta | 100.0 | 1e-96 | 281 |
LLPS-Ors-0436 | Oryza sativa | 100.0 | 1e-96 | 282 |
LLPS-Viv-0636 | Vitis vinifera | 100.0 | 1e-96 | 281 |
LLPS-Orp-0289 | Oryza punctata | 100.0 | 1e-96 | 281 |
LLPS-Tra-2230 | Triticum aestivum | 99.29 | 4e-96 | 280 |
LLPS-Brd-2435 | Brachypodium distachyon | 99.29 | 4e-96 | 280 |
LLPS-Sei-1130 | Setaria italica | 99.29 | 3e-96 | 280 |
LLPS-Vir-0422 | Vigna radiata | 99.29 | 3e-96 | 280 |
LLPS-Via-1039 | Vigna angularis | 99.29 | 3e-96 | 280 |
LLPS-Sot-0539 | Solanum tuberosum | 99.29 | 4e-96 | 280 |
LLPS-Hea-1238 | Helianthus annuus | 99.29 | 4e-96 | 280 |
LLPS-Dac-0467 | Daucus carota | 99.29 | 4e-96 | 280 |
LLPS-Thc-0140 | Theobroma cacao | 99.29 | 3e-96 | 280 |
LLPS-Sol-1115 | Solanum lycopersicum | 99.29 | 4e-96 | 280 |
LLPS-Glm-0635 | Glycine max | 99.29 | 3e-96 | 280 |
LLPS-Tru-0488 | Triticum urartu | 99.29 | 4e-96 | 280 |
LLPS-Coc-0493 | Corchorus capsularis | 99.29 | 3e-96 | 280 |
LLPS-Sob-0729 | Sorghum bicolor | 99.29 | 3e-96 | 280 |
LLPS-Nia-0889 | Nicotiana attenuata | 99.29 | 4e-96 | 280 |
LLPS-Gor-0024 | Gossypium raimondii | 99.29 | 3e-96 | 280 |
LLPS-Pot-0101 | Populus trichocarpa | 99.29 | 4e-96 | 280 |
LLPS-Prp-0169 | Prunus persica | 98.57 | 1e-95 | 279 |
LLPS-Phv-0376 | Phaseolus vulgaris | 98.57 | 1e-95 | 279 |
LLPS-Cus-1664 | Cucumis sativus | 98.56 | 3e-95 | 278 |
LLPS-Brn-1527 | Brassica napus | 97.86 | 2e-95 | 278 |
LLPS-Brr-1179 | Brassica rapa | 97.86 | 2e-95 | 278 |
LLPS-Amt-0315 | Amborella trichopoda | 97.6 | 4e-84 | 249 |
LLPS-Bro-0778 | Brassica oleracea | 97.53 | 5e-51 | 163 |
LLPS-Met-1194 | Medicago truncatula | 97.14 | 2e-94 | 276 |
LLPS-Hov-0025 | Hordeum vulgare | 97.14 | 6e-95 | 277 |
LLPS-Arl-0646 | Arabidopsis lyrata | 97.14 | 6e-95 | 277 |
LLPS-Art-0417 | Arabidopsis thaliana | 97.14 | 6e-95 | 277 |
LLPS-Php-0261 | Physcomitrella patens | 94.29 | 4e-92 | 270 |
LLPS-Sem-0052 | Selaginella moellendorffii | 91.43 | 2e-89 | 263 |
LLPS-Fud-1751 | Fukomys damarensis | 88.0 | 3e-39 | 134 |
LLPS-Xet-0143 | Xenopus tropicalis | 85.05 | 2e-60 | 188 |
LLPS-Scf-0936 | Scleropages formosus | 84.89 | 2e-81 | 243 |
LLPS-Dar-0615 | Danio rerio | 84.89 | 1e-81 | 243 |
LLPS-Orn-0363 | Oreochromis niloticus | 84.8 | 2e-73 | 223 |
LLPS-Tar-2013 | Takifugu rubripes | 84.44 | 7e-79 | 237 |
LLPS-Anp-1201 | Anas platyrhynchos | 84.4 | 2e-61 | 191 |
LLPS-Meg-1440 | Meleagris gallopavo | 84.25 | 1e-73 | 223 |
LLPS-Ran-1980 | Rattus norvegicus | 84.17 | 4e-81 | 242 |
LLPS-Ova-4274 | Ovis aries | 84.17 | 4e-81 | 242 |
LLPS-Mup-0828 | Mustela putorius furo | 84.17 | 4e-81 | 242 |
LLPS-Aim-0098 | Ailuropoda melanoleuca | 84.17 | 4e-81 | 242 |
LLPS-Mal-0897 | Mandrillus leucophaeus | 84.17 | 4e-81 | 242 |
LLPS-Paa-2959 | Papio anubis | 84.17 | 4e-81 | 242 |
LLPS-Xim-2194 | Xiphophorus maculatus | 84.17 | 4e-81 | 242 |
LLPS-Bot-0028 | Bos taurus | 84.17 | 4e-81 | 242 |
LLPS-Gaa-0696 | Gasterosteus aculeatus | 84.17 | 4e-81 | 242 |
LLPS-Dio-0500 | Dipodomys ordii | 84.17 | 4e-81 | 242 |
LLPS-Gog-1058 | Gorilla gorilla | 84.17 | 4e-81 | 242 |
LLPS-Caj-3392 | Callithrix jacchus | 84.17 | 4e-81 | 242 |
LLPS-Icp-0330 | Ictalurus punctatus | 84.17 | 4e-81 | 242 |
LLPS-Ora-0501 | Ornithorhynchus anatinus | 84.17 | 4e-81 | 242 |
LLPS-Chs-1469 | Chlorocebus sabaeus | 84.17 | 4e-81 | 242 |
LLPS-Mum-0759 | Mus musculus | 84.17 | 4e-81 | 242 |
LLPS-Maf-1113 | Macaca fascicularis | 84.17 | 4e-81 | 242 |
LLPS-Mea-0430 | Mesocricetus auratus | 84.17 | 4e-81 | 242 |
LLPS-Sus-0989 | Sus scrofa | 84.17 | 4e-81 | 242 |
LLPS-Leo-0936 | Lepisosteus oculatus | 84.17 | 4e-81 | 242 |
LLPS-Sah-0297 | Sarcophilus harrisii | 84.17 | 4e-81 | 242 |
LLPS-Cea-1390 | Cercocebus atys | 84.17 | 4e-81 | 242 |
LLPS-Aon-0371 | Aotus nancymaae | 84.17 | 4e-81 | 242 |
LLPS-Orl-0851 | Oryzias latipes | 84.17 | 4e-81 | 242 |
LLPS-Cas-1862 | Carlito syrichta | 84.17 | 4e-81 | 242 |
LLPS-Gaga-1053 | Gallus gallus | 84.17 | 4e-81 | 242 |
LLPS-Nol-0725 | Nomascus leucogenys | 84.17 | 4e-81 | 242 |
LLPS-Anc-1878 | Anolis carolinensis | 84.17 | 4e-81 | 242 |
LLPS-Ict-0413 | Ictidomys tridecemlineatus | 84.17 | 4e-81 | 242 |
LLPS-Cap-1360 | Cavia porcellus | 84.17 | 4e-81 | 242 |
LLPS-Eqc-1772 | Equus caballus | 84.17 | 4e-81 | 242 |
LLPS-Caf-3504 | Canis familiaris | 84.17 | 4e-81 | 242 |
LLPS-Poa-0220 | Pongo abelii | 84.17 | 4e-81 | 242 |
LLPS-Mam-0686 | Macaca mulatta | 84.17 | 4e-81 | 242 |
LLPS-Otg-2462 | Otolemur garnettii | 84.17 | 4e-81 | 242 |
LLPS-Rhb-1620 | Rhinopithecus bieti | 84.17 | 4e-81 | 242 |
LLPS-Orc-1321 | Oryctolagus cuniculus | 84.17 | 4e-81 | 242 |
LLPS-Scm-0656 | Scophthalmus maximus | 84.17 | 4e-81 | 242 |
LLPS-Fec-0358 | Felis catus | 84.17 | 4e-81 | 242 |
LLPS-Mod-0986 | Monodelphis domestica | 84.17 | 4e-81 | 242 |
LLPS-Lac-1620 | Latimeria chalumnae | 84.17 | 5e-81 | 242 |
LLPS-Hos-3118 | Homo sapiens | 84.17 | 4e-81 | 242 |
LLPS-Pap-2739 | Pan paniscus | 84.17 | 4e-81 | 242 |
LLPS-Pat-1400 | Pan troglodytes | 84.17 | 4e-81 | 242 |
LLPS-Pof-0159 | Poecilia formosa | 84.17 | 4e-81 | 242 |
LLPS-Loa-0190 | Loxodonta africana | 84.17 | 4e-81 | 242 |
LLPS-Man-3115 | Macaca nemestrina | 84.17 | 4e-81 | 242 |
LLPS-Tag-2828 | Taeniopygia guttata | 83.7 | 8e-78 | 233 |
LLPS-Pes-0590 | Pelodiscus sinensis | 83.7 | 6e-78 | 234 |
LLPS-Fia-1123 | Ficedula albicollis | 83.7 | 5e-78 | 234 |
LLPS-Ten-0855 | Tetraodon nigroviridis | 83.1 | 2e-79 | 238 |
LLPS-Urm-1704 | Ursus maritimus | 83.05 | 1e-64 | 201 |
LLPS-Chc-0645 | Chondrus crispus | 82.86 | 1e-80 | 241 |
LLPS-Asm-0757 | Astyanax mexicanus | 82.73 | 4e-72 | 219 |
LLPS-Myl-0594 | Myotis lucifugus | 82.01 | 2e-78 | 235 |
LLPS-Gas-0394 | Galdieria sulphuraria | 81.29 | 2e-80 | 241 |
LLPS-Drm-0500 | Drosophila melanogaster | 80.58 | 3e-79 | 237 |
LLPS-Ere-0022 | Erinaceus europaeus | 80.21 | 5e-49 | 159 |
LLPS-Tum-0145 | Tuber melanosporum | 80.0 | 3e-78 | 235 |
LLPS-Asfu-0970 | Aspergillus fumigatus | 80.0 | 1e-63 | 197 |
LLPS-Chr-0757 | Chlamydomonas reinhardtii | 79.29 | 6e-78 | 234 |
LLPS-Cii-0186 | Ciona intestinalis | 79.21 | 9e-52 | 166 |
LLPS-Kop-1047 | Komagataella pastoris | 78.95 | 3e-76 | 229 |
LLPS-Scj-0498 | Schizosaccharomyces japonicus | 78.68 | 1e-75 | 228 |
LLPS-Cym-0211 | Cyanidioschyzon merolae | 78.63 | 1e-73 | 223 |
LLPS-Asc-0112 | Aspergillus clavatus | 78.4 | 8e-67 | 205 |
LLPS-Scp-0788 | Schizosaccharomyces pombe | 78.1 | 3e-76 | 229 |
LLPS-Put-0185 | Puccinia triticina | 77.86 | 8e-71 | 216 |
LLPS-Pug-0616 | Puccinia graminis | 77.86 | 8e-71 | 216 |
LLPS-Cis-0205 | Ciona savignyi | 77.78 | 5e-66 | 204 |
LLPS-Cogr-0185 | Colletotrichum graminicola | 77.6 | 2e-66 | 204 |
LLPS-Asg-0895 | Ashbya gossypii | 77.44 | 2e-73 | 222 |
LLPS-Ast-0266 | Aspergillus terreus | 77.14 | 3e-75 | 227 |
LLPS-Abg-1144 | Absidia glauca | 77.1 | 3e-73 | 222 |
LLPS-Dos-1211 | Dothistroma septosporum | 77.04 | 5e-72 | 219 |
LLPS-Asn-0337 | Aspergillus nidulans | 76.98 | 3e-72 | 219 |
LLPS-Phn-1169 | Phaeosphaeria nodorum | 76.98 | 2e-74 | 225 |
LLPS-Miv-0050 | Microbotryum violaceum | 76.74 | 2e-70 | 215 |
LLPS-Blg-0205 | Blumeria graminis | 76.69 | 2e-70 | 215 |
LLPS-Scc-0060 | Schizosaccharomyces cryophilus | 76.64 | 1e-75 | 228 |
LLPS-Asf-0931 | Aspergillus flavus | 76.43 | 4e-72 | 219 |
LLPS-Aso-0236 | Aspergillus oryzae | 76.43 | 4e-72 | 219 |
LLPS-Asni-0307 | Aspergillus niger | 76.43 | 9e-75 | 226 |
LLPS-Nef-1043 | Neosartorya fischeri | 76.43 | 1e-74 | 226 |
LLPS-Zyt-0265 | Zymoseptoria tritici | 76.3 | 1e-71 | 218 |
LLPS-Crn-0213 | Cryptococcus neoformans | 76.3 | 2e-72 | 220 |
LLPS-Pyt-0005 | Pyrenophora teres | 76.09 | 1e-73 | 223 |
LLPS-Pytr-0874 | Pyrenophora triticirepentis | 76.09 | 1e-73 | 223 |
LLPS-Mel-0049 | Melampsora laricipopulina | 75.97 | 1e-65 | 202 |
LLPS-Sac-1153 | Saccharomyces cerevisiae | 75.94 | 4e-72 | 219 |
LLPS-Yal-0261 | Yarrowia lipolytica | 75.94 | 3e-72 | 219 |
LLPS-Scs-0238 | Sclerotinia sclerotiorum | 75.94 | 6e-70 | 214 |
LLPS-Usm-0172 | Ustilago maydis | 75.76 | 3e-72 | 219 |
LLPS-Spr-0103 | Sporisorium reilianum | 75.76 | 3e-72 | 219 |
LLPS-Cae-0140 | Caenorhabditis elegans | 75.54 | 2e-73 | 223 |
LLPS-Map-0080 | Magnaporthe poae | 75.19 | 7e-68 | 213 |
LLPS-Lem-0195 | Leptosphaeria maculans | 74.45 | 2e-68 | 219 |
LLPS-Nec-0117 | Neurospora crassa | 74.29 | 2e-70 | 214 |
LLPS-Coo-0670 | Colletotrichum orbiculare | 74.29 | 8e-70 | 213 |
LLPS-Mao-0342 | Magnaporthe oryzae | 74.29 | 3e-70 | 214 |
LLPS-Gag-0546 | Gaeumannomyces graminis | 74.29 | 3e-70 | 214 |
LLPS-Ved-0404 | Verticillium dahliae | 74.29 | 6e-70 | 214 |
LLPS-Trv-0427 | Trichoderma virens | 74.29 | 2e-70 | 215 |
LLPS-Trr-0749 | Trichoderma reesei | 74.29 | 2e-70 | 215 |
LLPS-Fuv-1071 | Fusarium verticillioides | 73.57 | 3e-69 | 212 |
LLPS-Osl-0284 | Ostreococcus lucimarinus | 73.57 | 3e-69 | 212 |
LLPS-Fuo-1224 | Fusarium oxysporum | 73.57 | 3e-69 | 212 |
LLPS-Fus-0013 | Fusarium solani | 73.57 | 2e-69 | 213 |
LLPS-Beb-0202 | Beauveria bassiana | 72.86 | 1e-68 | 210 |