LLPS-Xet-0077
gata1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | GATA-binding protein 1 |
| Gene Name: | gata1, XENTR_v90026728mg |
| Ensembl Gene: | ENSXETG00000018547.1 |
| Ensembl Protein: | ENSXETP00000040139.1 |
| Organism: | Xenopus tropicalis |
| Taxa ID: | 8364 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Chromatin, Paraspeckle | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSXETT00000040139.1 | ENSXETP00000040139.1 |
| UniProt | F6YQX8, F6YQX8_XENTR | |
| GeneBank | AAMC01149374, KV461594 | , OCA14464.1 |
| RefSeq | XM_002944359.4 | XP_002944405.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MDYTTLTTQE PLPNYTESAL ASTSEDSEFL YGLGGESSPG HYGGTVSSRA VGGFRHSPVL 60 61 QTFPLHWPET SVGIPHSLTA YGRSPGTVPL YPSAASSFGP ITSPPLYNAA PFLLGSAPPA 120 121 EHEGSPKFLE TLKTERTSPL TTDLLPLESR SPSLPQVGYL GVGGQEFSPS LFQSTEDREC 180 181 VNCGATVTPL WRRDLSGHYL CNACGLYHKM NGQNRPLIRP KKRLIVSKRA GTQCSNCHTS 240 241 TTTLWRRNAS GDPVCNACGL YYKLHNVNRP LTMKKEGIQT RNRKVSSKSK KKKQLDNPFE 300 301 PLKAGVEEPS PYPFGPLLFH GQMPPMGHMI TPSHHLIQSP RMSHSASAVG YRHATTGVLP 360 361 PLS 363 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGATTATA CCACTCTGAC CACACAGGAG CCCCTCCCTA ATTATACAGA GTCAGCTCTT 60 61 GCAAGCACTT CTGAGGACTC AGAGTTCCTG TATGGTCTGG GGGGTGAAAG CAGCCCTGGT 120 121 CATTATGGGG GGACAGTGAG CTCCCGAGCA GTGGGGGGAT TCCGACATTC TCCAGTGCTT 180 181 CAGACATTCC CTTTACATTG GCCAGAAACC AGTGTTGGGA TCCCCCACAG CCTGACAGCA 240 241 TATGGGAGAA GCCCAGGAAC AGTGCCTTTA TACCCCTCAG CTGCTTCGTC CTTTGGCCCT 300 301 ATTACGTCTC CTCCTTTGTA CAATGCTGCT CCTTTCTTGT TGGGCTCAGC TCCTCCAGCA 360 361 GAGCATGAAG GTAGTCCAAA GTTCCTGGAG ACCTTAAAGA CGGAGAGGAC AAGCCCACTG 420 421 ACCACTGATC TTTTGCCCTT GGAATCAAGA AGCCCCAGTT TGCCCCAGGT GGGGTATCTA 480 481 GGAGTAGGAG GACAGGAGTT CAGCCCCAGT CTGTTTCAGT CAACAGAAGA TCGCGAGTGT 540 541 GTGAACTGTG GAGCCACAGT GACTCCATTG TGGAGGCGAG ATCTGAGTGG GCACTACCTG 600 601 TGCAACGCCT GTGGCCTGTA CCACAAAATG AACGGACAGA ATCGTCCACT AATACGACCA 660 661 AAGAAACGCC TGATCGTCAG TAAGAGAGCT GGAACCCAGT GCAGTAATTG CCACACAAGC 720 721 ACCACCACCC TGTGGAGACG GAATGCAAGC GGAGACCCTG TCTGTAACGC CTGTGGCCTC 780 781 TATTACAAGC TCCACAATGT GAACCGCCCC CTGACGATGA AGAAGGAGGG GATCCAGACG 840 841 AGGAACCGAA AGGTGAGCAG CAAGTCCAAA AAGAAGAAGC AGCTGGACAA TCCCTTTGAG 900 901 CCTCTGAAGG CGGGAGTTGA GGAACCATCT CCGTATCCCT TCGGGCCTCT TCTCTTCCAT 960 961 GGCCAGATGC CACCAATGGG ACACATGATC ACTCCCTCAC ACCACCTTAT TCAGTCACCG 1020 1021 AGAATGTCTC ATTCCGCTTC AGCTGTCGGC TATCGACATG CGACAACAGG GGTATTGCCC 1080 1081 CCCCTTAGTT AA 1092 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Pof-0698 | Poecilia formosa | 80.7 | 3e-62 | 212 |
| LLPS-Scm-0400 | Scophthalmus maximus | 80.0 | 4e-62 | 211 |
| LLPS-Cea-0749 | Cercocebus atys | 80.0 | 4e-64 | 216 |
| LLPS-Xim-3227 | Xiphophorus maculatus | 80.0 | 2e-62 | 212 |
| LLPS-Scf-1908 | Scleropages formosus | 78.9 | 2e-54 | 189 |
| LLPS-Mea-3616 | Mesocricetus auratus | 78.7 | 6e-56 | 194 |
| LLPS-Ran-3965 | Rattus norvegicus | 78.7 | 7e-56 | 194 |
| LLPS-Dar-0879 | Danio rerio | 77.98 | 1e-53 | 187 |
| LLPS-Icp-4094 | Ictalurus punctatus | 77.85 | 1e-69 | 231 |
| LLPS-Mum-2066 | Mus musculus | 77.78 | 2e-55 | 193 |
| LLPS-Ten-1172 | Tetraodon nigroviridis | 76.36 | 1e-53 | 187 |
| LLPS-Pes-1974 | Pelodiscus sinensis | 76.15 | 2e-56 | 191 |
| LLPS-Leo-2184 | Lepisosteus oculatus | 75.93 | 5e-53 | 189 |
| LLPS-Orn-4008 | Oreochromis niloticus | 75.44 | 2e-52 | 184 |
| LLPS-Gaa-2594 | Gasterosteus aculeatus | 75.44 | 1e-52 | 185 |
| LLPS-Meg-1205 | Meleagris gallopavo | 75.23 | 4e-55 | 192 |
| LLPS-Hos-4118 | Homo sapiens | 75.23 | 3e-54 | 191 |
| LLPS-Pat-2935 | Pan troglodytes | 75.23 | 3e-54 | 191 |
| LLPS-Fec-2976 | Felis catus | 75.23 | 2e-54 | 191 |
| LLPS-Mod-0334 | Monodelphis domestica | 75.23 | 8e-54 | 189 |
| LLPS-Man-0291 | Macaca nemestrina | 75.23 | 3e-54 | 191 |
| LLPS-Otg-3406 | Otolemur garnettii | 75.23 | 2e-54 | 191 |
| LLPS-Fia-3825 | Ficedula albicollis | 75.23 | 2e-55 | 193 |
| LLPS-Rhb-2995 | Rhinopithecus bieti | 75.23 | 4e-54 | 190 |
| LLPS-Caf-2448 | Canis familiaris | 75.23 | 2e-54 | 191 |
| LLPS-Poa-3903 | Pongo abelii | 75.23 | 2e-54 | 191 |
| LLPS-Cap-1141 | Cavia porcellus | 75.23 | 3e-55 | 187 |
| LLPS-Eqc-2300 | Equus caballus | 75.23 | 2e-54 | 191 |
| LLPS-Mam-3758 | Macaca mulatta | 75.23 | 3e-54 | 190 |
| LLPS-Gaga-3785 | Gallus gallus | 75.23 | 4e-55 | 192 |
| LLPS-Nol-3614 | Nomascus leucogenys | 75.23 | 3e-54 | 191 |
| LLPS-Anc-2814 | Anolis carolinensis | 75.23 | 1e-54 | 191 |
| LLPS-Tag-2947 | Taeniopygia guttata | 75.23 | 4e-55 | 191 |
| LLPS-Maf-1780 | Macaca fascicularis | 75.23 | 2e-54 | 191 |
| LLPS-Chs-4673 | Chlorocebus sabaeus | 75.23 | 3e-54 | 191 |
| LLPS-Sus-4274 | Sus scrofa | 75.23 | 2e-54 | 191 |
| LLPS-Aon-3937 | Aotus nancymaae | 75.23 | 3e-54 | 191 |
| LLPS-Caj-4156 | Callithrix jacchus | 75.23 | 2e-54 | 191 |
| LLPS-Bot-2080 | Bos taurus | 75.23 | 2e-54 | 191 |
| LLPS-Paa-4440 | Papio anubis | 75.23 | 2e-54 | 191 |
| LLPS-Myl-1915 | Myotis lucifugus | 75.23 | 2e-55 | 188 |
| LLPS-Tut-2025 | Tursiops truncatus | 75.0 | 1e-51 | 187 |
| LLPS-Orl-2011 | Oryzias latipes | 74.56 | 5e-52 | 183 |
| LLPS-Orc-2466 | Oryctolagus cuniculus | 74.07 | 2e-53 | 182 |
| LLPS-Ict-2828 | Ictidomys tridecemlineatus | 74.07 | 4e-51 | 185 |
| LLPS-Asm-3911 | Astyanax mexicanus | 74.07 | 3e-51 | 184 |
| LLPS-Tar-3291 | Takifugu rubripes | 74.07 | 2e-50 | 182 |
| LLPS-Pap-3705 | Pan paniscus | 72.57 | 1e-52 | 185 |
| LLPS-Lac-3946 | Latimeria chalumnae | 71.68 | 1e-52 | 187 |
| LLPS-Sah-2955 | Sarcophilus harrisii | 70.8 | 9e-51 | 182 |
| LLPS-Ere-0914 | Erinaceus europaeus | 65.78 | 2e-63 | 212 |
| LLPS-Dio-2562 | Dipodomys ordii | 61.88 | 2e-70 | 234 |
| LLPS-Gog-1794 | Gorilla gorilla | 61.39 | 2e-69 | 231 |
| LLPS-Fud-0572 | Fukomys damarensis | 61.39 | 1e-69 | 232 |
| LLPS-Mal-0333 | Mandrillus leucophaeus | 61.39 | 2e-69 | 232 |
| LLPS-Aim-2608 | Ailuropoda melanoleuca | 61.05 | 2e-65 | 219 |
| LLPS-Mup-2587 | Mustela putorius furo | 61.05 | 2e-65 | 220 |
| LLPS-Urm-0197 | Ursus maritimus | 60.89 | 3e-70 | 234 |
| LLPS-Cas-2458 | Carlito syrichta | 50.32 | 5e-70 | 231 |
| LLPS-Loa-4421 | Loxodonta africana | 49.84 | 8e-66 | 220 |
| LLPS-Ova-0456 | Ovis aries | 49.05 | 1e-60 | 207 |