DrLLPS - Data resource of LLPS

LLPS-Viv-1975
VIT_08s0007g07280

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Superoxide dismutase [Cu-Zn]
Gene Name:	VIT_08s0007g07280
Ensembl Gene:	VIT_08s0007g07280
Ensembl Protein:	VIT_08s0007g07280.t01
Organism:	Vitis vinifera
Taxa ID:	29760
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Stress granule	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Homo sapiens	LLPS-Hos-1768	P00441	Client	Stress granule	57.62	1e-54	176
Mus musculus	LLPS-Mum-1226	P08228	Client	Stress granule	59.60	3e-57	182

▼ FUNCTION

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	VIT_08s0007g07280.t01	VIT_08s0007g07280.t01
UniProt		D7TI74, D7TI74_VITVI
GeneBank	FN595991	CBI29950.3
RefSeq	XM_002281535.4	XP_002281571.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MGSVKAVAVI AGNANVRGSL HFIQDPAGST HVKGRITGLT PGLHGFHIHA LGDTTNGCMS 60 61 TGPHFNPLKK DHGAPTDKER HAGDLGNIVA GPDGVAEVSI KDMQISLSGQ HSILGRAVVV 120 121 HADPDDLGRG GHELSKTTGN AGGRVGCGII GLQSSA 156

▼ KEYWORD

ID	Family
KW-0181	Complete proteome
KW-0186	Copper
KW-0479	Metal-binding
KW-0560	Oxidoreductase
KW-1185	Reference proteome
KW-0862	Zinc

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0005737	Cellular Component	Cytoplasm
GO:0005615	Cellular Component	Extracellular space
GO:0005507	Molecular Function	Copper ion binding
GO:0004784	Molecular Function	Superoxide dismutase activity
GO:0016532	Molecular Function	Superoxide dismutase copper chaperone activity
GO:0008270	Molecular Function	Zinc ion binding
GO:0019430	Biological Process	Removal of superoxide radicals

▼ KEGG

vvi:100260705

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Coc-0614	Corchorus capsularis	86.45	4e-89	264
LLPS-Gor-1942	Gossypium raimondii	84.97	2e-89	265
LLPS-Prp-0761	Prunus persica	84.67	3e-88	261
LLPS-Met-0472	Medicago truncatula	84.52	2e-86	257
LLPS-Nia-0800	Nicotiana attenuata	84.52	9e-89	263
LLPS-Sot-1307	Solanum tuberosum	83.87	3e-88	261
LLPS-Sol-1272	Solanum lycopersicum	83.23	3e-87	259
LLPS-Pot-0242	Populus trichocarpa	82.58	2e-87	260
LLPS-Dac-1481	Daucus carota	81.76	6e-84	250
LLPS-Mae-0225	Manihot esculenta	80.95	2e-82	246
LLPS-Cus-1334	Cucumis sativus	78.21	2e-83	249
LLPS-Glm-2938	Glycine max	75.16	2e-81	244
LLPS-Sei-1389	Setaria italica	74.0	1e-72	222
LLPS-Orm-0969	Oryza meridionalis	74.0	1e-74	227
LLPS-Orb-0521	Oryza barthii	73.33	4e-74	225
LLPS-Org-1603	Oryza glaberrima	73.33	4e-74	225
LLPS-Ors-1411	Oryza sativa	73.33	5e-74	225
LLPS-Orp-1498	Oryza punctata	73.15	3e-73	223
LLPS-Tra-0045	Triticum aestivum	72.26	3e-72	221
LLPS-Orbr-1329	Oryza brachyantha	72.15	2e-75	229
LLPS-Orni-1118	Oryza nivara	70.67	2e-71	218
LLPS-Mua-1287	Musa acuminata	70.67	8e-71	217
LLPS-Orr-2042	Oryza rufipogon	70.67	5e-71	221
LLPS-Orgl-1868	Oryza glumaepatula	70.0	2e-70	216
LLPS-Lep-1248	Leersia perrieri	70.0	2e-71	218
LLPS-Sob-1241	Sorghum bicolor	70.0	7e-72	219
LLPS-Tru-0812	Triticum urartu	69.61	5e-42	143
LLPS-Brd-1288	Brachypodium distachyon	69.33	3e-70	216
LLPS-Via-1942	Vigna angularis	69.33	6e-68	209
LLPS-Phv-1737	Phaseolus vulgaris	68.24	5e-64	201
LLPS-Vir-0168	Vigna radiata	67.57	3e-62	197
LLPS-Hea-1230	Helianthus annuus	67.55	3e-64	202
LLPS-Thc-2144	Theobroma cacao	66.89	9e-62	196
LLPS-Sem-0602	Selaginella moellendorffii	66.45	7e-65	202
LLPS-Amt-1602	Amborella trichopoda	66.22	3e-62	197
LLPS-Php-0852	Physcomitrella patens	65.54	1e-65	206
LLPS-Art-2769	Arabidopsis thaliana	65.54	4e-61	194
LLPS-Brn-1101	Brassica napus	65.1	4e-61	194
LLPS-Arl-1412	Arabidopsis lyrata	64.86	4e-61	194
LLPS-Ori-0324	Oryza indica	64.86	1e-61	196
LLPS-Brr-0357	Brassica rapa	64.86	2e-62	197
LLPS-Mal-0657	Mandrillus leucophaeus	64.8	2e-52	169
LLPS-Urm-2615	Ursus maritimus	64.46	2e-50	166
LLPS-Hov-0758	Hordeum vulgare	64.19	5e-60	193
LLPS-Zem-1938	Zea mays	64.19	1e-60	193
LLPS-Bro-1441	Brassica oleracea	63.51	1e-60	193
LLPS-Fud-1100	Fukomys damarensis	62.4	3e-49	161
LLPS-Poa-1980	Pongo abelii	62.4	2e-49	161
LLPS-Ict-2992	Ictidomys tridecemlineatus	61.33	2e-59	188
LLPS-Cap-3355	Cavia porcellus	61.33	2e-59	188
LLPS-Tut-0556	Tursiops truncatus	60.81	4e-58	184
LLPS-Gaga-1227	Gallus gallus	60.32	3e-44	149
LLPS-Paa-3327	Papio anubis	60.26	5e-59	187
LLPS-Maf-1277	Macaca fascicularis	60.26	2e-59	188
LLPS-Mam-1476	Macaca mulatta	60.26	2e-59	188
LLPS-Man-3708	Macaca nemestrina	60.26	8e-60	189
LLPS-Mup-3673	Mustela putorius furo	60.0	2e-59	188
LLPS-Otg-1315	Otolemur garnettii	60.0	9e-59	186
LLPS-Xet-2153	Xenopus tropicalis	59.73	2e-55	178
LLPS-Cas-0601	Carlito syrichta	59.73	3e-56	180
LLPS-Mum-1226	Mus musculus	59.6	3e-57	182
LLPS-Cea-1019	Cercocebus atys	59.6	3e-58	185
LLPS-Nol-1832	Nomascus leucogenys	59.6	1e-57	184
LLPS-Rhb-0981	Rhinopithecus bieti	59.6	2e-58	186
LLPS-Asm-2686	Astyanax mexicanus	59.46	3e-58	185
LLPS-Icp-0441	Ictalurus punctatus	59.33	8e-57	181
LLPS-Aon-3190	Aotus nancymaae	59.33	8e-57	181
LLPS-Fec-3691	Felis catus	59.33	5e-58	184
LLPS-Anp-2539	Anas platyrhynchos	59.2	1e-42	144
LLPS-Meg-2927	Meleagris gallopavo	59.09	1e-45	152
LLPS-Ran-4192	Rattus norvegicus	58.94	2e-56	181
LLPS-Aim-1185	Ailuropoda melanoleuca	58.94	8e-57	181
LLPS-Caj-2835	Callithrix jacchus	58.94	9e-57	181
LLPS-Mea-0144	Mesocricetus auratus	58.94	2e-56	181
LLPS-Orc-0680	Oryctolagus cuniculus	58.67	2e-56	180
LLPS-Fia-1701	Ficedula albicollis	58.06	4e-55	177
LLPS-Ova-1219	Ovis aries	58.0	4e-53	172
LLPS-Bot-2918	Bos taurus	58.0	7e-54	174
LLPS-Dar-2689	Danio rerio	57.72	2e-55	178
LLPS-Hos-1768	Homo sapiens	57.62	2e-54	176
LLPS-Pat-1781	Pan troglodytes	57.62	2e-54	176
LLPS-Pap-0577	Pan paniscus	57.62	2e-54	176
LLPS-Anc-2380	Anolis carolinensis	57.35	1e-47	157
LLPS-Abg-0029	Absidia glauca	57.33	1e-56	181
LLPS-Caf-1601	Canis familiaris	57.14	3e-47	157
LLPS-Gog-4135	Gorilla gorilla	56.95	1e-53	173
LLPS-Tag-0629	Taeniopygia guttata	56.77	1e-53	173
LLPS-Xim-2759	Xiphophorus maculatus	56.67	7e-56	179
LLPS-Sus-0707	Sus scrofa	56.67	5e-52	169
LLPS-Pof-3715	Poecilia formosa	56.67	1e-55	178
LLPS-Loa-0302	Loxodonta africana	56.67	3e-55	177
LLPS-Osl-0271	Ostreococcus lucimarinus	56.6	8e-50	165
LLPS-Asg-0134	Ashbya gossypii	56.21	5e-49	161
LLPS-Dio-0501	Dipodomys ordii	56.08	2e-52	170
LLPS-Eqc-0504	Equus caballus	56.06	2e-46	155
LLPS-Cii-1396	Ciona intestinalis	55.92	4e-50	164
LLPS-Pes-3592	Pelodiscus sinensis	55.92	1e-52	171
LLPS-Cis-0962	Ciona savignyi	55.63	4e-49	162
LLPS-Dos-0254	Dothistroma septosporum	55.63	6e-47	156
LLPS-Drm-0352	Drosophila melanogaster	55.49	7e-54	174
LLPS-Orl-2349	Oryzias latipes	55.33	4e-51	167
LLPS-Leo-0938	Lepisosteus oculatus	55.33	1e-53	173
LLPS-Mod-1336	Monodelphis domestica	55.33	7e-50	164
LLPS-Zyt-0431	Zymoseptoria tritici	54.97	1e-45	153
LLPS-Kop-1182	Komagataella pastoris	54.9	5e-46	154
LLPS-Pytr-0077	Pyrenophora triticirepentis	54.9	6e-47	156
LLPS-Lac-0898	Latimeria chalumnae	54.84	1e-55	178
LLPS-Sah-0925	Sarcophilus harrisii	54.61	4e-48	159
LLPS-Sac-1278	Saccharomyces cerevisiae	54.3	4e-45	151
LLPS-Asn-1098	Aspergillus nidulans	54.3	8e-45	150
LLPS-Pyt-0577	Pyrenophora teres	54.25	5e-46	154
LLPS-Crn-0119	Cryptococcus neoformans	54.25	4e-47	157
LLPS-Gaa-1849	Gasterosteus aculeatus	54.0	2e-52	170
LLPS-Orn-1980	Oreochromis niloticus	54.0	2e-51	167
LLPS-Asni-1176	Aspergillus niger	53.64	1e-43	147
LLPS-Tum-1096	Tuber melanosporum	53.59	2e-43	150
LLPS-Yal-1079	Yarrowia lipolytica	53.59	8e-47	155
LLPS-Phn-0783	Phaeosphaeria nodorum	53.59	2e-46	154
LLPS-Fus-1295	Fusarium solani	53.59	9e-44	148
LLPS-Scm-2210	Scophthalmus maximus	53.33	1e-52	171
LLPS-Nef-1349	Neosartorya fischeri	52.98	7e-44	148
LLPS-Ast-1101	Aspergillus terreus	52.98	4e-44	149
LLPS-Beb-0351	Beauveria bassiana	52.98	2e-43	147
LLPS-Ved-0129	Verticillium dahliae	52.75	2e-24	97.1
LLPS-Asfu-0240	Aspergillus fumigatus	52.7	7e-43	145
LLPS-Tar-0805	Takifugu rubripes	52.32	6e-53	171
LLPS-Lem-1094	Leptosphaeria maculans	52.29	1e-46	155
LLPS-Trv-1085	Trichoderma virens	52.29	5e-42	143
LLPS-Cae-0538	Caenorhabditis elegans	51.95	9e-46	154
LLPS-Scj-0716	Schizosaccharomyces japonicus	51.63	4e-40	139
LLPS-Trr-0037	Trichoderma reesei	51.63	3e-42	144
LLPS-Mao-0825	Magnaporthe oryzae	51.59	1e-39	137
LLPS-Asc-1005	Aspergillus clavatus	51.35	7e-39	135
LLPS-Asf-0723	Aspergillus flavus	50.99	7e-42	143
LLPS-Aso-1026	Aspergillus oryzae	50.99	7e-42	143
LLPS-Scs-0211	Sclerotinia sclerotiorum	50.99	4e-40	139
LLPS-Ten-2017	Tetraodon nigroviridis	50.98	1e-47	159
LLPS-Map-1107	Magnaporthe poae	50.97	7e-42	143
LLPS-Gag-0600	Gaeumannomyces graminis	50.97	5e-41	141
LLPS-Nec-0195	Neurospora crassa	50.33	2e-39	136
LLPS-Fuv-0230	Fusarium verticillioides	50.33	9e-41	142
LLPS-Cogr-0402	Colletotrichum graminicola	50.33	7e-42	143
LLPS-Fuo-1215	Fusarium oxysporum	50.0	2e-40	140
LLPS-Coo-1454	Colletotrichum orbiculare	48.37	1e-39	137
LLPS-Scp-0909	Schizosaccharomyces pombe	47.68	1e-35	127
LLPS-Cog-0176	Colletotrichum gloeosporioides	47.06	2e-38	134
LLPS-Scc-1314	Schizosaccharomyces cryophilus	45.45	2e-35	126
LLPS-Chc-0047	Chondrus crispus	36.8	7e-12	64.3

LLPS-Viv-1975VIT_08s0007g07280

Protein Sequence

Nucleotide Sequence

LLPS-Viv-1975
VIT_08s0007g07280