DrLLPS - Data resource of LLPS

LLPS-Vir-0089
LOC106756450

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Putative rRNA methyltransferase; 2'-O-ribose RNA methyltransferase SPB1 homolog
Gene Name:	LOC106756450
Ensembl Gene:	vigra.VC1973A.gnm6.ann1.Vradi02g03270
Ensembl Protein:	vigra.VC1973A.gnm6.ann1.Vradi02g03270.1
Organism:	Vigna radiata
Taxa ID:	3916
LLPS Type:	LLPS regulator

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nucleolus, P-body	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Caenorhabditis elegans	LLPS-Cae-0114	Q9N5N9	Regulator	P-body	50.50	0.0	826
Arabidopsis thaliana	LLPS-Art-0697	F4JTD2	Client	Nucleolus	59.21	1e-99	325

▼ FUNCTION

Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	vigra.VC1973A.gnm6.ann1.Vradi02g03270.1	vigra.VC1973A.gnm6.ann1.Vradi02g03270.1
UniProt		A0A1S3TKS4, A0A1S3TKS4_VIGRR
RefSeq	, XM_014638887.1	, XP_014494373.1, XP_014494373.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MEELTNVMDR KKKRAKKLLA KRRAKDKARK ATGMQMDAVE DGYVDHELFS LSSIKGKKDL 60 61 VAVDNTEYEG DEGEVEDSEN EEIHESPEHS SSDLEDSDEE RKRYNEQMED LLDKAYEKFV 120 121 IRKEGSAKQR KRIKKSYEAE AQLLEGGEDD DIVESKYDSD EDKGDQEANP LMVPLNDGAE 180 181 PTQEEIMKKW FSQDIFAEAA EEGDFEKDES KDEMDIDDEP KEKTSVAKKV KENKTAAPAV 240 241 VDHPQPQASK TLDDFEIVPA PGTDSSDDSS SDESEEDVET KAEILAYAKK MMRKKQREQI 300 301 LDDAYNKYMF DDEGLPKWFL DEEKKHRQPV KPLTKEEIAA MRAQFKEIDA RPAKKVAEAK 360 361 ARKKRAAMKK LEKVRKKANA ISDQTEISDR SKRKQIEQLY KKAVPKRPKK EYVVAKKGVQ 420 421 VKTGKGKVLV DRRMKKDARK HGMGKAGKGG SKGKKGKASK GKGASKASSA KKGKQRTK 478

Protein Sequence (FASTA)

1     MEELTNVMDR  KKKRAKKLLA  KRRAKDKARK  ATGMQMDAVE  DGYVDHELFS  LSSIKGKKDL  60
61    VAVDNTEYEG  DEGEVEDSEN  EEIHESPEHS  SSDLEDSDEE  RKRYNEQMED  LLDKAYEKFV  120
121   IRKEGSAKQR  KRIKKSYEAE  AQLLEGGEDD  DIVESKYDSD  EDKGDQEANP  LMVPLNDGAE  180
181   PTQEEIMKKW  FSQDIFAEAA  EEGDFEKDES  KDEMDIDDEP  KEKTSVAKKV  KENKTAAPAV  240
241   VDHPQPQASK  TLDDFEIVPA  PGTDSSDDSS  SDESEEDVET  KAEILAYAKK  MMRKKQREQI  300
301   LDDAYNKYMF  DDEGLPKWFL  DEEKKHRQPV  KPLTKEEIAA  MRAQFKEIDA  RPAKKVAEAK  360
361   ARKKRAAMKK  LEKVRKKANA  ISDQTEISDR  SKRKQIEQLY  KKAVPKRPKK  EYVVAKKGVQ  420
421   VKTGKGKVLV  DRRMKKDARK  HGMGKAGKGG  SKGKKGKASK  GKGASKASSA  KKGKQRTK  478

▼ KEYWORD

ID	Family
KW-0175	Coiled coil
KW-0181	Complete proteome
KW-0489	Methyltransferase
KW-0539	Nucleus
KW-1185	Reference proteome
KW-0690	Ribosome biogenesis
KW-0698	rRNA processing
KW-0949	S-adenosyl-L-methionine
KW-0808	Transferase

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0005730	Cellular Component	Nucleolus
GO:0008649	Molecular Function	RRNA methyltransferase activity
GO:0000453	Biological Process	Enzyme-directed rRNA 2'-O-methylation

▼ KEGG

vra:106756450

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Via-1219	Vigna angularis	96.39	0.0	601
LLPS-Glm-1576	Glycine max	90.43	0.0	555
LLPS-Phv-0528	Phaseolus vulgaris	90.21	0.0	541
LLPS-Met-0034	Medicago truncatula	73.59	4e-147	449
LLPS-Mae-0945	Manihot esculenta	71.11	3e-142	436
LLPS-Pot-0172	Populus trichocarpa	69.71	2e-117	371
LLPS-Thc-0994	Theobroma cacao	68.56	2e-134	416
LLPS-Dac-0947	Daucus carota	68.11	8e-123	386
LLPS-Gor-0777	Gossypium raimondii	67.98	1e-128	401
LLPS-Prp-0197	Prunus persica	67.7	8e-134	414
LLPS-Cus-1115	Cucumis sativus	67.55	2e-130	405
LLPS-Viv-1530	Vitis vinifera	66.08	3e-120	379
LLPS-Coc-0370	Corchorus capsularis	64.74	3e-126	395
LLPS-Nia-0376	Nicotiana attenuata	62.72	2e-109	350
LLPS-Amt-2209	Amborella trichopoda	62.22	3e-16	85.5
LLPS-Hea-1077	Helianthus annuus	61.83	2e-102	331
LLPS-Bro-0066	Brassica oleracea	61.54	2e-102	332
LLPS-Brn-1525	Brassica napus	60.86	5e-100	325
LLPS-Brr-1183	Brassica rapa	60.86	7e-101	327
LLPS-Arl-0612	Arabidopsis lyrata	60.72	2e-107	345
LLPS-Art-0697	Arabidopsis thaliana	60.27	1e-106	342
LLPS-Sol-0764	Solanum lycopersicum	59.23	6e-97	317
LLPS-Orgl-0704	Oryza glumaepatula	58.21	7e-71	246
LLPS-Sot-1535	Solanum tuberosum	57.52	3e-97	317
LLPS-Mua-0050	Musa acuminata	57.52	4e-86	288
LLPS-Lep-0672	Leersia perrieri	56.47	3e-80	272
LLPS-Orm-0209	Oryza meridionalis	56.44	2e-89	295
LLPS-Orni-0927	Oryza nivara	55.77	3e-70	245
LLPS-Orp-1554	Oryza punctata	55.68	7e-84	281
LLPS-Orb-0931	Oryza barthii	55.23	7e-80	270
LLPS-Org-1477	Oryza glaberrima	55.23	8e-80	271
LLPS-Zem-0944	Zea mays	55.04	1e-85	287
LLPS-Orr-0783	Oryza rufipogon	55.01	1e-79	270
LLPS-Ors-1138	Oryza sativa	55.01	1e-79	270
LLPS-Sob-0985	Sorghum bicolor	54.95	2e-81	275
LLPS-Orbr-0468	Oryza brachyantha	54.69	2e-78	267
LLPS-Tra-1219	Triticum aestivum	53.8	5e-78	266
LLPS-Tru-0828	Triticum urartu	53.58	1e-79	268
LLPS-Sei-1205	Setaria italica	53.49	1e-81	275
LLPS-Hov-1083	Hordeum vulgare	53.38	9e-77	263
LLPS-Cap-0961	Cavia porcellus	52.68	3e-12	73.2
LLPS-Cas-0013	Carlito syrichta	52.68	5e-13	75.5
LLPS-Ori-1168	Oryza indica	52.08	3e-73	253
LLPS-Mam-0119	Macaca mulatta	51.89	4e-12	72.8
LLPS-Aon-0468	Aotus nancymaae	51.79	2e-12	73.9
LLPS-Sus-0353	Sus scrofa	51.79	5e-12	72.4
LLPS-Caj-2979	Callithrix jacchus	51.79	6e-13	75.5
LLPS-Tut-1211	Tursiops truncatus	50.89	1e-11	71.2
LLPS-Mal-0773	Mandrillus leucophaeus	50.89	1e-12	74.7
LLPS-Paa-0560	Papio anubis	50.89	1e-12	74.7
LLPS-Ova-1873	Ovis aries	50.89	2e-11	70.5
LLPS-Cea-1831	Cercocebus atys	50.89	1e-12	74.7
LLPS-Mea-0064	Mesocricetus auratus	50.89	7e-12	72.0
LLPS-Maf-0364	Macaca fascicularis	50.89	1e-12	74.7
LLPS-Chs-0750	Chlorocebus sabaeus	50.89	1e-12	74.7
LLPS-Fud-1331	Fukomys damarensis	50.89	2e-11	70.9
LLPS-Gog-0762	Gorilla gorilla	50.89	2e-12	73.9
LLPS-Poa-0192	Pongo abelii	50.89	2e-12	73.9
LLPS-Eqc-0535	Equus caballus	50.89	8e-12	72.0
LLPS-Nol-0419	Nomascus leucogenys	50.89	1e-12	74.3
LLPS-Man-1308	Macaca nemestrina	50.89	1e-12	74.7
LLPS-Loa-0911	Loxodonta africana	50.89	8e-12	72.0
LLPS-Pap-1089	Pan paniscus	50.89	1e-12	74.3
LLPS-Pat-0728	Pan troglodytes	50.89	1e-12	74.3
LLPS-Hos-0524	Homo sapiens	50.89	1e-12	74.3
LLPS-Brd-0068	Brachypodium distachyon	50.21	2e-70	246
LLPS-Bot-0056	Bos taurus	50.0	4e-11	69.7
LLPS-Myl-0527	Myotis lucifugus	50.0	3e-11	70.1
LLPS-Ran-0714	Rattus norvegicus	50.0	4e-11	69.3
LLPS-Ict-1443	Ictidomys tridecemlineatus	50.0	7e-12	72.0
LLPS-Orc-1031	Oryctolagus cuniculus	50.0	1e-11	71.2
LLPS-Rhb-0434	Rhinopithecus bieti	50.0	2e-12	73.9
LLPS-Otg-2327	Otolemur garnettii	50.0	7e-12	72.0
LLPS-Dio-0486	Dipodomys ordii	49.11	2e-11	70.9
LLPS-Aim-2050	Ailuropoda melanoleuca	49.11	5e-11	69.3
LLPS-Mup-1295	Mustela putorius furo	49.11	4e-11	69.7
LLPS-Mum-1098	Mus musculus	49.11	7e-11	68.9
LLPS-Caf-0337	Canis familiaris	49.11	6e-11	68.9
LLPS-Urm-0907	Ursus maritimus	49.11	4e-11	69.7
LLPS-Fec-0054	Felis catus	47.5	2e-11	70.9
LLPS-Sem-1242	Selaginella moellendorffii	46.5	4e-58	210
LLPS-Sah-0166	Sarcophilus harrisii	46.43	4e-10	66.2
LLPS-Anp-0448	Anas platyrhynchos	46.4	9e-12	71.6
LLPS-Gas-0440	Galdieria sulphuraria	46.15	8e-11	68.6
LLPS-Anc-1357	Anolis carolinensis	45.97	4e-11	69.7
LLPS-Asfu-0182	Aspergillus fumigatus	45.97	2e-13	77.4
LLPS-Nef-0772	Neosartorya fischeri	45.97	3e-13	76.6
LLPS-Leo-2958	Lepisosteus oculatus	45.87	2e-08	61.2
LLPS-Fia-0995	Ficedula albicollis	45.6	2e-11	70.5
LLPS-Nec-0089	Neurospora crassa	45.54	4e-08	60.1
LLPS-Mod-2365	Monodelphis domestica	45.54	2e-09	64.3
LLPS-Aso-0023	Aspergillus oryzae	45.45	3e-14	79.7
LLPS-Asf-0607	Aspergillus flavus	45.45	3e-14	79.7
LLPS-Php-0784	Physcomitrella patens	44.65	8e-61	218
LLPS-Chc-0278	Chondrus crispus	44.44	1e-13	77.4
LLPS-Usm-0343	Ustilago maydis	44.27	2e-11	70.9
LLPS-Scf-2867	Scleropages formosus	44.26	5e-10	66.2
LLPS-Asg-0008	Ashbya gossypii	44.04	2e-08	61.2
LLPS-Ast-0535	Aspergillus terreus	43.94	1e-14	80.5
LLPS-Yal-0842	Yarrowia lipolytica	43.1	1e-08	61.6
LLPS-Scj-0012	Schizosaccharomyces japonicus	42.42	3e-11	70.1
LLPS-Asni-0849	Aspergillus niger	42.42	2e-12	73.9
LLPS-Spr-0274	Sporisorium reilianum	41.98	3e-10	67.0
LLPS-Scp-0917	Schizosaccharomyces pombe	41.54	4e-13	76.3
LLPS-Mao-0677	Magnaporthe oryzae	41.22	2e-11	70.5
LLPS-Cae-0114	Caenorhabditis elegans	41.09	1e-08	62.0
LLPS-Abg-0611	Absidia glauca	40.91	4e-12	72.8
LLPS-Coo-0674	Colletotrichum orbiculare	40.91	4e-10	66.6
LLPS-Kop-0214	Komagataella pastoris	40.77	7e-09	62.4
LLPS-Dar-1371	Danio rerio	40.6	2e-09	64.3
LLPS-Drm-1698	Drosophila melanogaster	40.34	1e-07	58.2
LLPS-Sac-0934	Saccharomyces cerevisiae	40.16	4e-09	63.2
LLPS-Cogr-0225	Colletotrichum graminicola	40.15	7e-10	65.9
LLPS-Tar-1095	Takifugu rubripes	39.85	2e-08	61.2
LLPS-Ten-0674	Tetraodon nigroviridis	39.85	2e-08	61.2
LLPS-Miv-0325	Microbotryum violaceum	39.53	5e-10	66.2
LLPS-Blg-0325	Blumeria graminis	39.17	8e-08	58.9
LLPS-Pug-0218	Puccinia graminis	38.66	4e-07	57.0
LLPS-Xim-2684	Xiphophorus maculatus	38.27	3e-10	67.0
LLPS-Orl-1171	Oryzias latipes	38.27	3e-10	67.0
LLPS-Pof-0479	Poecilia formosa	38.27	1e-10	68.6
LLPS-Trv-0925	Trichoderma virens	38.17	7e-09	62.4
LLPS-Phn-0508	Phaeosphaeria nodorum	38.17	1e-10	67.8
LLPS-Beb-0005	Beauveria bassiana	38.17	4e-09	63.2
LLPS-Fus-1145	Fusarium solani	38.17	1e-08	61.6
LLPS-Asm-1252	Astyanax mexicanus	37.65	1e-10	68.2
LLPS-Icp-0141	Ictalurus punctatus	37.65	5e-10	66.2
LLPS-Orn-0650	Oreochromis niloticus	37.65	8e-11	68.6
LLPS-Ved-0150	Verticillium dahliae	37.12	2e-07	57.8
LLPS-Scm-1162	Scophthalmus maximus	37.04	6e-10	65.9
LLPS-Put-0285	Puccinia triticina	36.97	9e-07	55.8
LLPS-Pyt-0255	Pyrenophora teres	36.64	1e-09	64.7
LLPS-Pytr-0197	Pyrenophora triticirepentis	36.64	1e-09	64.7
LLPS-Xet-0738	Xenopus tropicalis	36.6	3e-07	57.4
LLPS-Cis-0995	Ciona savignyi	36.42	1e-06	55.1
LLPS-Crn-0282	Cryptococcus neoformans	36.31	9e-09	62.4
LLPS-Mel-0712	Melampsora laricipopulina	34.71	1e-06	55.1
LLPS-Scc-0639	Schizosaccharomyces cryophilus	32.89	5e-15	82.0
LLPS-Map-0036	Magnaporthe poae	32.37	2e-09	64.7
LLPS-Asn-0850	Aspergillus nidulans	31.89	6e-16	84.7
LLPS-Gaga-2273	Gallus gallus	31.82	6e-11	68.9
LLPS-Chr-0876	Chlamydomonas reinhardtii	31.49	1e-21	102
LLPS-Trr-0254	Trichoderma reesei	31.27	3e-10	67.0
LLPS-Gag-0238	Gaeumannomyces graminis	31.25	1e-08	62.0
LLPS-Asc-0450	Aspergillus clavatus	30.41	3e-15	82.8
LLPS-Lem-0284	Leptosphaeria maculans	28.82	8e-07	55.8

LLPS-Vir-0089LOC106756450

Protein Sequence

Nucleotide Sequence

LLPS-Vir-0089
LOC106756450