LLPS-Ved-0827
VDAG_04461
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 |
Gene Name: | VDAG_04461 |
Ensembl Gene: | VDAG_04461 |
Ensembl Protein: | EGY23023 |
Organism: | Verticillium dahliae |
Taxa ID: | 498257 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | EGY23023 | EGY23023 |
UniProt | G2X2D7, G2X2D7_VERDV | |
GeneBank | DS572701 | EGY23023.1 |
RefSeq | XM_009650908.1 | XP_009649203.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MPLPEKPKLR FVPKKERERQ AAEKAKNEAE ELRRKLEEDA RKKAESEKKW LEKANAPAEN 60 61 HRDHDTDRPP ERQQQDRRSG QNGKGASKKG GDARMTEEEF EKKQLRERYL GPEVNRNSSF 120 121 SAAKKRKRAT EFKFDWDEGE DTTLKDDQLA PRVTTSKVVS LSGIGGGDDF GEEAEQAARR 180 181 RARRIEEQYG EDGPELAQRF MDEWYNSRDL ARKRAERFGF GKRWTDKALN EMTARDWRIF 240 241 KEDFGIATKG GAIPNPMRNW DESGLPSRLL DIVHRVGYNE PTPIQRAAIP IALQARDLIG 300 301 VAVTGSGKTA SFLLPLLVYI SDLPPLGEMN KNDGPYGLIL APTRELVQQI ESEANKFATP 360 361 LGFRVVSIVG GHSLEEQAFA LRNGAEIIVA TPGRLVDCIE RRLLVLGQCC YVIMDEADRM 420 421 IDLGFEEPVN KILDALPVTN EKPDTDEAEN AQLMKRYLGG KDRYRQTMMY TATMPSIVER 480 481 IAKKYLRRPA IVTIGNIGEA VDTVEQRVEF VSGEDKRKKR LQQILSSGDF APPIIVFVNI 540 541 KRNCDAVARD VKHMGFSAVT LHGSKTQEQR EAALASVRNG QTDVLVATDL AGRGIDVADV 600 601 SLVVNFNMAT NIESYTHRIG RTGRAGKSGV AITFLGPEDS DLMYDMKQIL TKSSISKVPE 660 661 ELRRHEAAQQ RPQKGYSKKS SDR 683 |
Nucleotide CDS Sequence (FASTA) |
1 ATGCCTCTCC CCGAAAAGCC AAAGCTACGG TTCGTTCCGA AGAAGGAGCG TGAGCGTCAG 60 61 GCGGCTGAGA AGGCGAAAAA CGAAGCTGAA GAGCTGCGGC GCAAGCTGGA AGAGGATGCA 120 121 AGAAAGAAAG CCGAATCCGA GAAGAAGTGG CTCGAGAAGG CAAATGCGCC TGCCGAGAAC 180 181 CACCGCGATC ACGATACAGA CCGACCGCCT GAACGACAAC AACAAGACCG GAGATCTGGT 240 241 CAGAATGGAA AGGGCGCGTC CAAGAAGGGA GGTGATGCTA GGATGACCGA GGAGGAATTC 300 301 GAAAAGAAAC AGCTGCGCGA GCGCTACCTG GGCCCCGAGG TGAACCGCAA CTCTAGCTTT 360 361 TCTGCGGCGA AGAAGCGCAA AAGGGCGACC GAGTTCAAGT TCGACTGGGA CGAAGGCGAA 420 421 GACACGACGC TCAAGGATGA TCAGCTGGCG CCGCGGGTCA CCACCAGCAA GGTCGTGTCA 480 481 TTGTCCGGGA TAGGCGGGGG TGACGACTTC GGGGAAGAGG CCGAGCAGGC AGCCAGGCGT 540 541 CGCGCCAGGC GGATCGAAGA GCAATACGGC GAGGATGGAC CCGAGCTTGC GCAAAGATTC 600 601 ATGGATGAGT GGTACAACAG TCGCGATCTG GCCAGGAAGC GAGCAGAACG CTTCGGCTTC 660 661 GGAAAGCGAT GGACAGACAA GGCCCTGAAC GAGATGACAG CCCGTGATTG GAGAATCTTC 720 721 AAGGAGGACT TCGGTATCGC GACCAAAGGC GGTGCGATTC CGAACCCGAT GCGGAATTGG 780 781 GACGAGTCGG GTCTGCCTAG TCGTCTCCTC GACATCGTCC ACCGAGTTGG CTACAATGAG 840 841 CCAACGCCTA TTCAGAGAGC TGCTATTCCA ATCGCGCTAC AGGCGAGGGA CTTGATCGGT 900 901 GTTGCCGTCA CAGGTTCCGG AAAAACAGCT TCATTCTTGC TGCCGCTACT GGTCTACATC 960 961 TCTGACCTGC CCCCTCTAGG CGAAATGAAC AAGAACGACG GACCGTACGG CCTCATCCTA 1020 1021 GCGCCTACTC GAGAGCTTGT ACAGCAGATC GAATCTGAAG CGAACAAGTT TGCGACGCCA 1080 1081 TTAGGATTCA GAGTTGTCAG CATCGTTGGT GGTCACTCAT TGGAAGAGCA AGCCTTTGCC 1140 1141 CTGCGCAACG GAGCAGAGAT CATCGTCGCC ACACCTGGCC GACTCGTGGA CTGTATCGAG 1200 1201 CGGCGGTTGC TGGTTCTGGG ACAGTGCTGC TATGTCATTA TGGATGAGGC TGATCGAATG 1260 1261 ATTGATCTCG GTTTCGAGGA ACCAGTGAAC AAGATTCTGG ACGCGCTACC GGTTACCAAC 1320 1321 GAGAAGCCTG ACACGGATGA GGCAGAGAAC GCGCAGCTCA TGAAGCGCTA CCTGGGAGGA 1380 1381 AAGGATCGAT ACCGACAGAC GATGATGTAC ACGGCCACCA TGCCTAGCAT CGTTGAGAGG 1440 1441 ATCGCCAAGA AATACCTGCG GCGACCGGCT ATTGTCACGA TTGGAAACAT CGGCGAAGCT 1500 1501 GTTGACACAG TCGAACAGCG CGTCGAGTTC GTCTCCGGGG AGGATAAGCG AAAGAAACGG 1560 1561 CTGCAACAGA TCCTCTCCTC GGGCGATTTC GCGCCTCCCA TCATCGTCTT CGTCAACATC 1620 1621 AAACGGAACT GCGATGCTGT GGCACGCGAC GTCAAGCACA TGGGTTTCTC TGCCGTTACC 1680 1681 CTCCACGGCA GCAAGACGCA GGAGCAGCGA GAGGCCGCGC TGGCATCTGT GCGTAATGGG 1740 1741 CAGACAGATG TCCTTGTGGC AACGGATCTC GCGGGTCGTG GTATCGACGT TGCGGATGTT 1800 1801 TCGCTGGTCG TCAATTTCAA CATGGCTACT AACATTGAGT CGTATACGCA CCGCATTGGT 1860 1861 CGTACTGGTC GTGCTGGAAA GAGTGGTGTT GCCATCACTT TCCTTGGGCC TGAGGATTCG 1920 1921 GATCTCATGT ACGATATGAA GCAGATCCTC ACGAAGAGCT CCATCTCGAA GGTGCCCGAG 1980 1981 GAGCTGCGGA GACATGAGGC AGCCCAGCAA AGGCCCCAGA AGGGGTACAG CAAGAAGTCA 2040 2041 TCGGATAGAT AG 2052 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Asf-0903 | Aspergillus flavus | 81.18 | 0.0 | 736 |
LLPS-Trr-0074 | Trichoderma reesei | 78.15 | 0.0 | 892 |
LLPS-Fus-1461 | Fusarium solani | 74.69 | 0.0 | 912 |
LLPS-Nec-0582 | Neurospora crassa | 73.37 | 0.0 | 864 |
LLPS-Cogr-1452 | Colletotrichum graminicola | 73.16 | 0.0 | 920 |
LLPS-Trv-0149 | Trichoderma virens | 72.59 | 0.0 | 915 |
LLPS-Scs-0081 | Sclerotinia sclerotiorum | 71.36 | 0.0 | 832 |
LLPS-Cog-0912 | Colletotrichum gloeosporioides | 71.3 | 0.0 | 917 |
LLPS-Blg-1075 | Blumeria graminis | 70.93 | 0.0 | 821 |
LLPS-Coo-0343 | Colletotrichum orbiculare | 69.99 | 0.0 | 909 |
LLPS-Ast-1009 | Aspergillus terreus | 68.65 | 0.0 | 796 |
LLPS-Asn-0906 | Aspergillus nidulans | 68.62 | 0.0 | 798 |
LLPS-Beb-0640 | Beauveria bassiana | 68.45 | 0.0 | 895 |
LLPS-Asc-0165 | Aspergillus clavatus | 68.39 | 0.0 | 812 |
LLPS-Fuo-0339 | Fusarium oxysporum | 68.37 | 0.0 | 889 |
LLPS-Fuv-0123 | Fusarium verticillioides | 67.98 | 0.0 | 884 |
LLPS-Nef-0389 | Neosartorya fischeri | 67.56 | 0.0 | 795 |
LLPS-Asfu-0641 | Aspergillus fumigatus | 67.56 | 0.0 | 791 |
LLPS-Lem-0523 | Leptosphaeria maculans | 66.89 | 0.0 | 763 |
LLPS-Map-0567 | Magnaporthe poae | 66.67 | 0.0 | 750 |
LLPS-Gag-1445 | Gaeumannomyces graminis | 66.49 | 0.0 | 738 |
LLPS-Pytr-0999 | Pyrenophora triticirepentis | 66.39 | 0.0 | 756 |
LLPS-Pyt-1164 | Pyrenophora teres | 66.38 | 0.0 | 755 |
LLPS-Aso-1028 | Aspergillus oryzae | 66.34 | 0.0 | 803 |
LLPS-Zyt-0821 | Zymoseptoria tritici | 66.16 | 0.0 | 767 |
LLPS-Phn-0094 | Phaeosphaeria nodorum | 65.53 | 0.0 | 760 |
LLPS-Asni-1285 | Aspergillus niger | 64.95 | 0.0 | 770 |
LLPS-Spr-0133 | Sporisorium reilianum | 61.02 | 0.0 | 563 |
LLPS-Yal-0979 | Yarrowia lipolytica | 60.61 | 0.0 | 580 |
LLPS-Miv-0820 | Microbotryum violaceum | 60.2 | 0.0 | 602 |
LLPS-Xet-0773 | Xenopus tropicalis | 57.81 | 0.0 | 575 |
LLPS-Ten-1474 | Tetraodon nigroviridis | 56.92 | 2e-126 | 385 |
LLPS-Mao-0556 | Magnaporthe oryzae | 54.71 | 0.0 | 623 |
LLPS-Mel-0134 | Melampsora laricipopulina | 54.59 | 0.0 | 617 |
LLPS-Brr-1209 | Brassica rapa | 53.77 | 2e-171 | 513 |
LLPS-Sot-0834 | Solanum tuberosum | 53.54 | 6e-167 | 502 |
LLPS-Pug-1055 | Puccinia graminis | 53.32 | 0.0 | 622 |
LLPS-Put-0594 | Puccinia triticina | 51.41 | 0.0 | 613 |
LLPS-Crn-1132 | Cryptococcus neoformans | 51.24 | 0.0 | 579 |
LLPS-Orl-3017 | Oryzias latipes | 51.08 | 0.0 | 582 |
LLPS-Fia-0863 | Ficedula albicollis | 51.02 | 0.0 | 582 |
LLPS-Tar-0808 | Takifugu rubripes | 50.94 | 0.0 | 563 |
LLPS-Orn-3397 | Oreochromis niloticus | 50.93 | 0.0 | 575 |
LLPS-Usm-0400 | Ustilago maydis | 50.85 | 0.0 | 569 |
LLPS-Scf-0741 | Scleropages formosus | 50.85 | 0.0 | 580 |
LLPS-Scp-1283 | Schizosaccharomyces pombe | 50.77 | 0.0 | 590 |
LLPS-Asm-0122 | Astyanax mexicanus | 50.58 | 0.0 | 579 |
LLPS-Dar-3400 | Danio rerio | 50.52 | 0.0 | 579 |
LLPS-Icp-2897 | Ictalurus punctatus | 50.51 | 0.0 | 581 |
LLPS-Pof-2682 | Poecilia formosa | 50.49 | 0.0 | 584 |
LLPS-Kop-0383 | Komagataella pastoris | 50.44 | 2e-155 | 468 |
LLPS-Scc-0611 | Schizosaccharomyces cryophilus | 50.34 | 0.0 | 587 |
LLPS-Xim-0139 | Xiphophorus maculatus | 50.33 | 0.0 | 581 |
LLPS-Gaa-3551 | Gasterosteus aculeatus | 50.33 | 0.0 | 580 |
LLPS-Scm-3472 | Scophthalmus maximus | 50.16 | 0.0 | 581 |
LLPS-Gaga-2119 | Gallus gallus | 50.16 | 0.0 | 587 |
LLPS-Leo-2833 | Lepisosteus oculatus | 50.16 | 0.0 | 580 |
LLPS-Anc-2858 | Anolis carolinensis | 50.0 | 0.0 | 584 |
LLPS-Myl-1738 | Myotis lucifugus | 50.0 | 0.0 | 584 |
LLPS-Mod-0015 | Monodelphis domestica | 49.84 | 0.0 | 583 |
LLPS-Fec-2850 | Felis catus | 49.84 | 0.0 | 582 |
LLPS-Urm-1466 | Ursus maritimus | 49.84 | 0.0 | 582 |
LLPS-Pap-4046 | Pan paniscus | 49.84 | 0.0 | 583 |
LLPS-Pat-2564 | Pan troglodytes | 49.84 | 0.0 | 582 |
LLPS-Hos-0364 | Homo sapiens | 49.84 | 0.0 | 583 |
LLPS-Loa-3532 | Loxodonta africana | 49.84 | 0.0 | 582 |
LLPS-Otg-1605 | Otolemur garnettii | 49.84 | 0.0 | 582 |
LLPS-Orc-3694 | Oryctolagus cuniculus | 49.84 | 0.0 | 582 |
LLPS-Eqc-1257 | Equus caballus | 49.84 | 0.0 | 583 |
LLPS-Cap-3931 | Cavia porcellus | 49.84 | 0.0 | 583 |
LLPS-Caf-1829 | Canis familiaris | 49.84 | 0.0 | 582 |
LLPS-Poa-0336 | Pongo abelii | 49.84 | 0.0 | 582 |
LLPS-Mam-1781 | Macaca mulatta | 49.84 | 0.0 | 583 |
LLPS-Cas-2204 | Carlito syrichta | 49.84 | 0.0 | 583 |
LLPS-Ict-2765 | Ictidomys tridecemlineatus | 49.84 | 0.0 | 582 |
LLPS-Chs-0228 | Chlorocebus sabaeus | 49.84 | 0.0 | 583 |
LLPS-Mea-1104 | Mesocricetus auratus | 49.84 | 0.0 | 582 |
LLPS-Mum-4115 | Mus musculus | 49.84 | 0.0 | 583 |
LLPS-Maf-0456 | Macaca fascicularis | 49.84 | 0.0 | 583 |
LLPS-Cea-1924 | Cercocebus atys | 49.84 | 0.0 | 583 |
LLPS-Sah-2914 | Sarcophilus harrisii | 49.84 | 0.0 | 583 |
LLPS-Aon-1352 | Aotus nancymaae | 49.84 | 0.0 | 583 |
LLPS-Sus-4308 | Sus scrofa | 49.84 | 0.0 | 582 |
LLPS-Gog-3048 | Gorilla gorilla | 49.84 | 0.0 | 583 |
LLPS-Caj-0771 | Callithrix jacchus | 49.84 | 0.0 | 582 |
LLPS-Fud-2479 | Fukomys damarensis | 49.84 | 0.0 | 583 |
LLPS-Bot-2998 | Bos taurus | 49.84 | 0.0 | 582 |
LLPS-Dio-0628 | Dipodomys ordii | 49.84 | 0.0 | 582 |
LLPS-Ran-0207 | Rattus norvegicus | 49.84 | 0.0 | 582 |
LLPS-Ova-0464 | Ovis aries | 49.84 | 0.0 | 580 |
LLPS-Mup-1875 | Mustela putorius furo | 49.84 | 0.0 | 582 |
LLPS-Aim-2830 | Ailuropoda melanoleuca | 49.84 | 0.0 | 582 |
LLPS-Paa-1847 | Papio anubis | 49.84 | 0.0 | 582 |
LLPS-Mal-2296 | Mandrillus leucophaeus | 49.84 | 0.0 | 583 |
LLPS-Lac-0591 | Latimeria chalumnae | 49.67 | 0.0 | 584 |
LLPS-Man-2273 | Macaca nemestrina | 49.67 | 0.0 | 578 |
LLPS-Cii-1010 | Ciona intestinalis | 49.49 | 0.0 | 563 |
LLPS-Arl-1886 | Arabidopsis lyrata | 49.06 | 1e-175 | 526 |
LLPS-Sem-1441 | Selaginella moellendorffii | 49.04 | 3e-177 | 525 |
LLPS-Viv-0580 | Vitis vinifera | 48.98 | 3e-177 | 530 |
LLPS-Gor-0883 | Gossypium raimondii | 48.89 | 0.0 | 538 |
LLPS-Sol-0777 | Solanum lycopersicum | 48.81 | 5e-178 | 529 |
LLPS-Bro-2812 | Brassica oleracea | 48.8 | 2e-174 | 526 |
LLPS-Php-2370 | Physcomitrella patens | 48.71 | 3e-172 | 523 |
LLPS-Hea-1004 | Helianthus annuus | 48.71 | 1e-177 | 530 |
LLPS-Prp-0295 | Prunus persica | 48.7 | 2e-176 | 528 |
LLPS-Pot-2147 | Populus trichocarpa | 48.54 | 8e-177 | 528 |
LLPS-Mae-0939 | Manihot esculenta | 48.54 | 1e-176 | 528 |
LLPS-Thc-0972 | Theobroma cacao | 48.54 | 2e-180 | 537 |
LLPS-Cus-0221 | Cucumis sativus | 48.46 | 2e-177 | 530 |
LLPS-Glm-2424 | Glycine max | 48.45 | 6e-177 | 529 |
LLPS-Coc-0704 | Corchorus capsularis | 48.37 | 1e-177 | 530 |
LLPS-Art-0200 | Arabidopsis thaliana | 48.32 | 3e-175 | 525 |
LLPS-Orbr-1090 | Oryza brachyantha | 48.29 | 1e-177 | 526 |
LLPS-Nia-0568 | Nicotiana attenuata | 48.29 | 9e-177 | 529 |
LLPS-Orb-1805 | Oryza barthii | 48.29 | 2e-178 | 528 |
LLPS-Via-2197 | Vigna angularis | 48.28 | 1e-175 | 526 |
LLPS-Vir-1255 | Vigna radiata | 48.28 | 1e-176 | 526 |
LLPS-Ors-0543 | Oryza sativa | 48.21 | 3e-177 | 530 |
LLPS-Org-0195 | Oryza glaberrima | 48.21 | 4e-177 | 530 |
LLPS-Ori-0520 | Oryza indica | 48.21 | 3e-177 | 530 |
LLPS-Orgl-0011 | Oryza glumaepatula | 48.21 | 4e-177 | 530 |
LLPS-Amt-1942 | Amborella trichopoda | 48.2 | 2e-175 | 524 |
LLPS-Phv-1798 | Phaseolus vulgaris | 48.11 | 1e-174 | 524 |
LLPS-Orr-1805 | Oryza rufipogon | 48.1 | 4e-176 | 528 |
LLPS-Orp-2147 | Oryza punctata | 48.03 | 2e-176 | 528 |
LLPS-Drm-1951 | Drosophila melanogaster | 47.94 | 0.0 | 564 |
LLPS-Lep-1381 | Leersia perrieri | 47.94 | 2e-174 | 523 |
LLPS-Sei-1323 | Setaria italica | 47.88 | 5e-173 | 520 |
LLPS-Dac-0375 | Daucus carota | 47.8 | 3e-175 | 524 |
LLPS-Orni-1839 | Oryza nivara | 47.78 | 3e-176 | 530 |
LLPS-Sob-1578 | Sorghum bicolor | 47.72 | 1e-172 | 521 |
LLPS-Zem-0822 | Zea mays | 47.72 | 3e-173 | 520 |
LLPS-Nol-0057 | Nomascus leucogenys | 47.54 | 1e-166 | 504 |
LLPS-Met-0729 | Medicago truncatula | 47.42 | 5e-174 | 521 |
LLPS-Tru-0788 | Triticum urartu | 47.38 | 4e-171 | 512 |
LLPS-Brd-1532 | Brachypodium distachyon | 47.38 | 1e-170 | 513 |
LLPS-Tra-1284 | Triticum aestivum | 47.38 | 1e-170 | 513 |
LLPS-Hov-0594 | Hordeum vulgare | 47.38 | 6e-170 | 513 |
LLPS-Cae-2002 | Caenorhabditis elegans | 47.32 | 0.0 | 541 |
LLPS-Scj-1254 | Schizosaccharomyces japonicus | 46.91 | 0.0 | 577 |
LLPS-Chr-1163 | Chlamydomonas reinhardtii | 46.89 | 1e-169 | 516 |
LLPS-Gas-0903 | Galdieria sulphuraria | 46.17 | 3e-165 | 500 |
LLPS-Asg-0801 | Ashbya gossypii | 45.93 | 1e-127 | 397 |
LLPS-Cis-0067 | Ciona savignyi | 45.55 | 1e-163 | 493 |
LLPS-Rhb-1048 | Rhinopithecus bieti | 45.09 | 3e-159 | 484 |
LLPS-Osl-0447 | Ostreococcus lucimarinus | 44.37 | 9e-147 | 446 |
LLPS-Brn-3367 | Brassica napus | 43.78 | 2e-146 | 447 |
LLPS-Abg-1881 | Absidia glauca | 42.66 | 8e-138 | 427 |
LLPS-Sac-1060 | Saccharomyces cerevisiae | 42.07 | 9e-118 | 372 |
LLPS-Cym-1015 | Cyanidioschyzon merolae | 41.01 | 1e-97 | 321 |
LLPS-Chc-0857 | Chondrus crispus | 40.66 | 6e-140 | 431 |
LLPS-Mua-0001 | Musa acuminata | 38.57 | 2e-90 | 300 |
LLPS-Orm-0129 | Oryza meridionalis | 37.5 | 1e-90 | 310 |