• Disorder▼
  • Domain▼
  • PTM▼
  • Variation▼
  • Mutation▼
  • Interaction▼
  • Disease▼
  • Drug▼
  • Physicochemical▼
  • Function▼
  • Proteomics▼
  • Structure▼
  • Localization▼
  • Expression▼
  • Element▼
  • Methylation▼

LLPS-Urm-0134
RBM42

Integrated Annotations

▼ OVERVIEW

Status: Unreviewed
Protein Name: RNA-binding protein 42
Gene Name: RBM42
Ensembl Gene: ENSUMAG00000020223.1
Ensembl Protein: ENSUMAP00000027841.1
Organism: Ursus maritimus
Taxa ID: 29073
LLPS Type: Others


▼ PROPERTY


——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:
CondensateEvidenceOrthologs
Nuclear speckle, Nucleolus, Stress granulePredicted from orthologs(View)

▼ SEQUENCE

Protein Sequence (FASTA)
1     MAGAGPAPGL  PGAGGPVVPG  PGGGMPGKSG  EERLKEMEAE  MALFEQEVLG  APVTGIPTAV  60
61    PTVPTVPTVE  AMQVPAAPVI  RPIIATNTYQ  QVQQTLEARA  AAAATVVPPM  VGGPPFVGPV  120
121   GFGPGDRSHL  DSPEAREAMF  LRRAAVAPQR  APILRPAFVP  HVLQRADSAL  SSAAGGPRPM  180
181   ALRPPHQALV  GPPLPGPPGP  PMMLPPMARA  PGPPLSSMAA  LRPPLEEPAT  PRELGLGLGL  240
241   GLKEKEEAVV  AAAAGLEEAS  AAVAVGAGGA  PTGPAVIGPS  LPLALAMPLP  EPEPLPLPLE  300
301   VVRGLLPPLR  IPELLSLRPR  PRPPRPEPPP  GLMALEVPEP  LGEDKKKGKP  EKLKRCIRTA  360
361   AGSSWEDPSL  LEWDADDFRI  FCGDLGNEVN  DDILARAFSR  FPSFLKAKVI  RDKRTGKTKG  420
421   YGFVSFKDPS  DYVRAMREMN  GKYVGSRPIK  LRKSMWKDRN  LDVVRKKQKE  KKKLGLR  477
Nucleotide CDS Sequence (FASTA)
1     ATGGCCGGGG  CGGGGCCAGC  CCCGGGACTC  CCGGGTGCAG  GAGGACCTGT  GGTCCCGGGC  60
61    CCTGGCGGCG  GCATGCCGGG  CAAGAGCGGG  GAGGAACGCT  TGAAGGAGAT  GGAGGCGGAG  120
121   ATGGCCCTGT  TTGAGCAGGA  AGTTCTGGGG  GCTCCGGTAA  CCGGCATCCC  AACTGCTGTG  180
181   CCTACGGTGC  CCACGGTCCC  CACGGTGGAA  GCGATGCAGG  TCCCAGCAGC  TCCAGTGATC  240
241   CGCCCAATTA  TCGCAACCAA  CACTTACCAG  CAGGTCCAAC  AGACTCTGGA  GGCCCGGGCA  300
301   GCTGCTGCAG  CCACAGTGGT  TCCTCCCATG  GTGGGTGGCC  CTCCTTTTGT  GGGTCCAGTT  360
361   GGCTTTGGCC  CTGGTGATCG  GAGTCACCTG  GACAGTCCAG  AGGCTCGAGA  AGCTATGTTC  420
421   CTGCGTCGAG  CAGATTCTGC  TCTTTCTTCT  GCAGCAGGTG  GTCCCCGCCC  TATGGCCCTG  480
481   CGGCCCCCTC  ACCAGGCTCT  TGTGGGCCCC  CCTCTGCCTG  GCCCCCCCGG  ACCACCTATG  540
541   ATGCTCCCAC  CAATGGCTCG  GGCCCCAGGG  CCCCCTCTGA  GCTCCATGGC  TGCTCTGAGA  600
601   CCTCCCCTGG  AGGAGCCAGC  GACACCTCGA  GAGCTGGGGC  TGGGCCTGGG  CTTGGGCCTG  660
661   AAAGAGAAGG  AAGAGGCAGT  GGTGGCCGCG  GCAGCCGGGC  TGGAGGAGGC  TAGCGCAGCA  720
721   GTGGCTGTTG  GGGCAGGAGG  TGCCCCCACC  GGCCCTGCGG  TCATCGGGCC  CAGCCTGCCA  780
781   TTGGCCCTGG  CCATGCCTTT  GCCTGAGCCT  GAGCCCCTGC  CCCTCCCGCT  GGAAGTTGTA  840
841   CGAGGCCTAC  TTCCCCCACT  ACGCATTCCT  GAGCTCCTGT  CCCTGCGTCC  ACGACCCCGG  900
901   CCCCCACGGC  CTGAGCCACC  CCCTGGCCTC  ATGGCTCTTG  AGGTCCCAGA  GCCCTTGGGT  960
961   GAGGACAAGA  AGAAAGGAAA  GCCAGAGAAA  TTGAAACGCT  GCATTCGCAC  AGCAGCTGGG  1020
1021  AGCAGCTGGG  AGGACCCCAG  CCTGCTGGAG  TGGGATGCAG  ATGACTTCCG  GATCTTCTGT  1080
1081  GGGGATTTGG  GCAATGAAGT  GAATGATGAC  ATCTTGGCAC  GCGCCTTCAG  CCGCTTCCCA  1140
1141  TCCTTCCTTA  AGGCTAAGGT  GATCCGAGAC  AAGCGCACAG  GCAAGACCAA  GGGCTATGGC  1200
1201  TTCGTCAGCT  TTAAGGACCC  CAGCGACTAC  GTGCGCGCCA  TGCGTGAGAT  GAATGGGAAG  1260
1261  TATGTGGGCT  CACGCCCCAT  CAAGCTGCGC  AAGAGTATGT  GGAAGGACCG  GAACCTGGAT  1320
1321  GTGGTGCGCA  AGAAGCAGAA  GGAGAAGAAG  AAACTGGGCC  TGAGATAG  1368

▼ ORTHOLOGY

DrLLPS IDOrganismIdentityE-valueScore
LLPS-Cas-2112Carlito syrichta100.03e-74 248
LLPS-Nol-3081Nomascus leucogenys100.06e-74 246
LLPS-Ict-2404Ictidomys tridecemlineatus100.02e-74 248
LLPS-Eqc-2454Equus caballus100.03e-74 247
LLPS-Poa-1593Pongo abelii100.01e-73 246
LLPS-Mam-0464Macaca mulatta100.09e-74 247
LLPS-Otg-1607Otolemur garnettii100.07e-74 247
LLPS-Rhb-2418Rhinopithecus bieti100.09e-74 247
LLPS-Orc-0349Oryctolagus cuniculus100.05e-74 246
LLPS-Mod-0368Monodelphis domestica100.04e-72 244
LLPS-Fec-2351Felis catus100.03e-74 248
LLPS-Hos-1187Homo sapiens100.09e-74 247
LLPS-Pat-1839Pan troglodytes100.09e-74 247
LLPS-Pap-1555Pan paniscus100.04e-74 248
LLPS-Man-0721Macaca nemestrina100.09e-74 247
LLPS-Ran-0977Rattus norvegicus100.04e-74 248
LLPS-Mup-1063Mustela putorius furo100.02e-74 248
LLPS-Myl-2699Myotis lucifugus100.03e-74 248
LLPS-Mal-3718Mandrillus leucophaeus100.09e-74 247
LLPS-Paa-3078Papio anubis100.04e-74 248
LLPS-Dio-0683Dipodomys ordii100.06e-74 247
LLPS-Gog-3699Gorilla gorilla100.09e-74 247
LLPS-Caj-1168Callithrix jacchus100.03e-74 248
LLPS-Chs-3713Chlorocebus sabaeus100.07e-74 246
LLPS-Maf-1014Macaca fascicularis100.09e-74 247
LLPS-Mum-1500Mus musculus100.05e-74 248
LLPS-Sus-1356Sus scrofa100.04e-74 248
LLPS-Sah-0855Sarcophilus harrisii100.06e-73 244
LLPS-Cea-3078Cercocebus atys100.09e-74 247
LLPS-Aon-1519Aotus nancymaae100.05e-74 247
LLPS-Aim-0385Ailuropoda melanoleuca99.511e-65 225
LLPS-Cap-0885Cavia porcellus99.315e-74 248
LLPS-Ova-2394Ovis aries99.312e-73 246
LLPS-Bot-1436Bos taurus99.312e-74 249
LLPS-Fud-0556Fukomys damarensis99.318e-74 247
LLPS-Anc-2978Anolis carolinensis94.318e-71 238
LLPS-Loa-0893Loxodonta africana93.792e-64 222
LLPS-Tar-1719Takifugu rubripes93.442e-68 233
LLPS-Ten-0413Tetraodon nigroviridis93.399e-68 229
LLPS-Leo-1105Lepisosteus oculatus92.682e-70 236
LLPS-Pof-0697Poecilia formosa92.626e-70 234
LLPS-Xim-1178Xiphophorus maculatus92.627e-70 234
LLPS-Xet-0873Xenopus tropicalis91.876e-70 234
LLPS-Gaa-2433Gasterosteus aculeatus91.877e-70 234
LLPS-Asm-0172Astyanax mexicanus91.879e-69 233
LLPS-Mea-0053Mesocricetus auratus91.845e-48 169
LLPS-Orn-1783Oreochromis niloticus91.81e-69 234
LLPS-Scf-0529Scleropages formosus91.81e-65 223
LLPS-Scm-2129Scophthalmus maximus91.062e-69 233
LLPS-Dar-1800Danio rerio90.984e-67 227
LLPS-Ora-2664Ornithorhynchus anatinus90.723e-41 149
LLPS-Icp-1081Ictalurus punctatus88.621e-67 229
LLPS-Pes-0878Pelodiscus sinensis86.997e-60 209
LLPS-Anp-2132Anas platyrhynchos86.443e-28 111
LLPS-Lac-0176Latimeria chalumnae84.434e-56 199
LLPS-Phv-2011Phaseolus vulgaris75.499e-50 176
LLPS-Gor-1363Gossypium raimondii75.492e-50 178
LLPS-Vir-0292Vigna radiata75.492e-48 175
LLPS-Via-1632Vigna angularis75.491e-49 176
LLPS-Mua-0098Musa acuminata75.01e-38 145
LLPS-Coc-0875Corchorus capsularis74.511e-49 176
LLPS-Tra-2867Triticum aestivum74.511e-49 175
LLPS-Brd-2109Brachypodium distachyon74.514e-49 174
LLPS-Hov-1649Hordeum vulgare74.513e-49 174
LLPS-Dac-1386Daucus carota74.512e-49 175
LLPS-Thc-1610Theobroma cacao74.512e-49 175
LLPS-Bro-0061Brassica oleracea73.533e-49 175
LLPS-Zem-0056Zea mays73.535e-49 174
LLPS-Brr-1153Brassica rapa73.533e-49 174
LLPS-Art-0611Arabidopsis thaliana73.533e-49 175
LLPS-Cus-1963Cucumis sativus73.534e-49 175
LLPS-Sei-0052Setaria italica73.537e-49 173
LLPS-Arl-1927Arabidopsis lyrata73.533e-50 177
LLPS-Hea-0402Helianthus annuus73.534e-49 175
LLPS-Brn-2710Brassica napus73.532e-49 175
LLPS-Glm-0715Glycine max72.827e-49 174
LLPS-Tru-1102Triticum urartu72.552e-1888.6
LLPS-Prp-0707Prunus persica72.556e-48 171
LLPS-Sob-0760Sorghum bicolor72.553e-48 172
LLPS-Nia-1757Nicotiana attenuata72.555e-48 171
LLPS-Mae-1740Manihot esculenta72.557e-49 174
LLPS-Ors-0243Oryza sativa72.553e-48 172
LLPS-Sot-0707Solanum tuberosum72.559e-50 176
LLPS-Ori-0070Oryza indica72.553e-48 172
LLPS-Orbr-0171Oryza brachyantha71.574e-46 166
LLPS-Pot-0897Populus trichocarpa71.571e-48 173
LLPS-Lep-0896Leersia perrieri71.573e-47 169
LLPS-Org-0018Oryza glaberrima70.593e-46 166
LLPS-Orm-0733Oryza meridionalis70.593e-46 166
LLPS-Amt-0029Amborella trichopoda70.595e-46 170
LLPS-Met-1853Medicago truncatula70.596e-48 171
LLPS-Orgl-1470Oryza glumaepatula70.593e-46 166
LLPS-Orni-0880Oryza nivara70.593e-46 166
LLPS-Orb-1133Oryza barthii70.593e-46 166
LLPS-Sem-0106Selaginella moellendorffii69.97e-45 160
LLPS-Viv-0318Vitis vinifera69.613e-47 170
LLPS-Php-0952Physcomitrella patens69.611e-45 169
LLPS-Sol-0066Solanum lycopersicum69.613e-46 167
LLPS-Abg-0584Absidia glauca68.573e-47 172
LLPS-Cae-1339Caenorhabditis elegans67.215e-53 187
LLPS-Drm-0489Drosophila melanogaster65.772e-50 180
LLPS-Osl-0475Ostreococcus lucimarinus64.086e-39 142
LLPS-Orr-0258Oryza rufipogon63.252e-44 162
LLPS-Scj-0842Schizosaccharomyces japonicus63.162e-37 141
LLPS-Orp-1449Oryza punctata62.183e-44 162
LLPS-Pug-0712Puccinia graminis61.767e-36 139
LLPS-Scp-0409Schizosaccharomyces pombe60.429e-36 137
LLPS-Chr-0360Chlamydomonas reinhardtii60.04e-38 146
LLPS-Spr-0582Sporisorium reilianum59.63e-32 129
LLPS-Tum-0505Tuber melanosporum58.593e-34 135
LLPS-Chc-0610Chondrus crispus58.331e-35 138
LLPS-Asc-0643Aspergillus clavatus57.142e-30 125
LLPS-Gas-0035Galdieria sulphuraria57.012e-37 143
LLPS-Asn-1156Aspergillus nidulans57.03e-33 133
LLPS-Asfu-1213Aspergillus fumigatus56.736e-33 133
LLPS-Nef-0841Neosartorya fischeri56.731e-32 132
LLPS-Scc-0575Schizosaccharomyces cryophilus56.577e-34 131
LLPS-Ast-1063Aspergillus terreus56.05e-33 132
LLPS-Blg-0978Blumeria graminis56.09e-32 129
LLPS-Asni-0804Aspergillus niger56.01e-32 129
LLPS-Put-0426Puccinia triticina55.881e-28 119
LLPS-Fuo-0489Fusarium oxysporum55.563e-30 124
LLPS-Fuv-0778Fusarium verticillioides55.563e-30 124
LLPS-Phn-1299Phaeosphaeria nodorum55.02e-33 133
LLPS-Usm-0104Ustilago maydis54.551e-30 124
LLPS-Beb-0985Beauveria bassiana54.559e-30 123
LLPS-Asf-0703Aspergillus flavus53.853e-31 128
LLPS-Aso-0420Aspergillus oryzae53.853e-31 128
LLPS-Fus-0681Fusarium solani53.541e-28 120
LLPS-Mao-0747Magnaporthe oryzae53.543e-29 122
LLPS-Zyt-0611Zymoseptoria tritici52.531e-26 108
LLPS-Crn-0454Cryptococcus neoformans52.046e-29 119
LLPS-Yal-0950Yarrowia lipolytica51.553e-30 120
LLPS-Dos-0595Dothistroma septosporum51.522e-26 114
LLPS-Cogr-1165Colletotrichum graminicola51.525e-28 118
LLPS-Cog-0923Colletotrichum gloeosporioides51.522e-26 113
LLPS-Nec-0069Neurospora crassa51.523e-28 118
LLPS-Trr-1316Trichoderma reesei50.513e-28 115
LLPS-Gag-0726Gaeumannomyces graminis50.513e-28 119
LLPS-Pytr-0110Pyrenophora triticirepentis50.07e-29 119
LLPS-Trv-0105Trichoderma virens50.04e-1787.8
LLPS-Pyt-0770Pyrenophora teres50.06e-29 119
LLPS-Ved-0115Verticillium dahliae49.495e-28 118
LLPS-Miv-1008Microbotryum violaceum49.023e-29 120
LLPS-Lem-0127Leptosphaeria maculans49.07e-28 117
LLPS-Coo-0139Colletotrichum orbiculare48.727e-1787.0
LLPS-Map-0047Magnaporthe poae44.712e-1685.9
LLPS-Mel-0516Melampsora laricipopulina44.055e-1787.4
LLPS-Kop-1128Komagataella pastoris43.94e-2092.8
LLPS-Scs-0736Sclerotinia sclerotiorum42.351e-1583.2