LLPS-Tut-2241
SDF2
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | stromal cell-derived factor 2 |
Gene Name: | SDF2 |
Ensembl Gene: | ENSTTRG00000004090.1 |
Ensembl Protein: | ENSTTRP00000003851.1 |
Organism: | Tursiops truncatus |
Taxa ID: | 9739 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSTTRT00000004089.1 | ENSTTRP00000003851.1 |
UniProt | A0A2U3V178, A0A2U3V178_TURTR | |
RefSeq | , XM_004314920.1 | , XP_004314968.1, XP_004314968.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MAVVSLLLFG GLWSAVGSSS LAVVTCGSVV KLLNTRHNVR LHSHDVRYGS GSGQQSVTGV 60 61 TSVDDSNSYW RIRGKTATVC ERGTPIRCGQ PIRLTHVNTG RNLHSHHFTS PLSGNQEVSA 120 121 FGEEGEGDYL DDWTVLCNGP YWVRDGEVRF KHSSTEVLLS VTGEQYGRPI SGQKEVHGMA 180 181 QPSQNNYWKA MEGIFMKPSE LLKAEGHHTE L 211 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGCTGTGG TGTCGCTGCT GTTGTTCGGG GGTTTGTGGA GTGCTGTGGG CTCGTCCAGT 60 61 CTGGCTGTCG TTACATGCGG TTCTGTGGTG AAGCTGCTCA ATACGCGCCA CAACGTGCGA 120 121 CTGCACTCAC ACGACGTGCG CTACGGGTCA GGTAGTGGGC AGCAGTCAGT GACAGGTGTA 180 181 ACCTCTGTGG ATGACAGCAA TAGTTACTGG AGGATACGGG GGAAGACGGC CACAGTGTGT 240 241 GAGAGGGGAA CCCCCATCAG ATGTGGTCAG CCCATCCGGC TGACACATGT CAACACTGGC 300 301 CGAAACCTCC ATAGTCACCA CTTCACCTCA CCTCTTTCTG GAAACCAGGA AGTGAGTGCT 360 361 TTTGGTGAGG AAGGTGAAGG CGACTATCTG GATGACTGGA CAGTGCTCTG TAATGGGCCC 420 421 TACTGGGTGA GGGATGGTGA GGTGCGGTTC AAGCATTCTT CCACTGAGGT TCTGCTGTCT 480 481 GTCACAGGAG AACAATATGG TCGACCCATC AGTGGGCAAA AAGAGGTGCA TGGCATGGCC 540 541 CAGCCAAGCC AGAACAATTA CTGGAAAGCC ATGGAAGGCA TCTTCATGAA GCCCAGTGAG 600 601 TTGTTGAAGG CAGAAGGCCA TCACACAGAG CTATGA 636 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Bot-2352 | Bos taurus | 100.0 | 3e-107 | 317 |
LLPS-Ova-3407 | Ovis aries | 99.05 | 1e-141 | 402 |
LLPS-Sus-4207 | Sus scrofa | 97.63 | 6e-140 | 397 |
LLPS-Chs-0741 | Chlorocebus sabaeus | 97.16 | 2e-133 | 381 |
LLPS-Aon-4244 | Aotus nancymaae | 97.16 | 2e-133 | 380 |
LLPS-Aim-2862 | Ailuropoda melanoleuca | 97.16 | 9e-134 | 382 |
LLPS-Poa-3836 | Pongo abelii | 97.16 | 2e-133 | 380 |
LLPS-Caf-0958 | Canis familiaris | 97.16 | 1e-133 | 381 |
LLPS-Cas-0728 | Carlito syrichta | 97.16 | 8e-140 | 397 |
LLPS-Cea-2180 | Cercocebus atys | 96.68 | 8e-138 | 392 |
LLPS-Gog-2014 | Gorilla gorilla | 96.68 | 1e-132 | 379 |
LLPS-Fud-2910 | Fukomys damarensis | 96.68 | 2e-138 | 393 |
LLPS-Mal-3961 | Mandrillus leucophaeus | 96.68 | 8e-138 | 392 |
LLPS-Paa-3025 | Papio anubis | 96.68 | 8e-138 | 392 |
LLPS-Urm-2372 | Ursus maritimus | 96.68 | 6e-133 | 380 |
LLPS-Man-2728 | Macaca nemestrina | 96.68 | 8e-138 | 392 |
LLPS-Rhb-4311 | Rhinopithecus bieti | 96.68 | 3e-138 | 393 |
LLPS-Eqc-2322 | Equus caballus | 96.68 | 1e-138 | 394 |
LLPS-Mam-2706 | Macaca mulatta | 96.68 | 8e-138 | 392 |
LLPS-Ict-4629 | Ictidomys tridecemlineatus | 96.68 | 1e-138 | 394 |
LLPS-Dio-2943 | Dipodomys ordii | 96.21 | 3e-132 | 377 |
LLPS-Myl-2480 | Myotis lucifugus | 96.21 | 7e-138 | 392 |
LLPS-Hos-3983 | Homo sapiens | 96.21 | 4e-132 | 377 |
LLPS-Pap-3487 | Pan paniscus | 96.21 | 4e-132 | 377 |
LLPS-Nol-3885 | Nomascus leucogenys | 96.21 | 6e-133 | 379 |
LLPS-Caj-4038 | Callithrix jacchus | 95.73 | 6e-132 | 377 |
LLPS-Fec-3945 | Felis catus | 95.73 | 2e-131 | 376 |
LLPS-Otg-3506 | Otolemur garnettii | 95.73 | 6e-137 | 390 |
LLPS-Mea-0068 | Mesocricetus auratus | 95.26 | 4e-131 | 375 |
LLPS-Cap-2229 | Cavia porcellus | 95.26 | 3e-137 | 390 |
LLPS-Mum-3971 | Mus musculus | 94.79 | 2e-130 | 373 |
LLPS-Ran-3798 | Rattus norvegicus | 94.31 | 2e-129 | 371 |
LLPS-Loa-1599 | Loxodonta africana | 94.31 | 2e-135 | 386 |
LLPS-Orc-1846 | Oryctolagus cuniculus | 94.31 | 4e-136 | 387 |
LLPS-Ora-2752 | Ornithorhynchus anatinus | 89.86 | 1e-97 | 288 |
LLPS-Mod-3974 | Monodelphis domestica | 87.56 | 6e-111 | 324 |
LLPS-Sah-1981 | Sarcophilus harrisii | 87.05 | 7e-114 | 332 |
LLPS-Pes-2931 | Pelodiscus sinensis | 85.14 | 2e-93 | 277 |
LLPS-Gaga-3311 | Gallus gallus | 81.91 | 9e-106 | 310 |
LLPS-Anc-2200 | Anolis carolinensis | 81.73 | 2e-103 | 305 |
LLPS-Xet-2988 | Xenopus tropicalis | 78.87 | 2e-100 | 297 |
LLPS-Orl-3737 | Oryzias latipes | 76.5 | 6e-91 | 273 |
LLPS-Gaa-0516 | Gasterosteus aculeatus | 75.82 | 1e-88 | 267 |
LLPS-Asm-3875 | Astyanax mexicanus | 75.53 | 2e-90 | 272 |
LLPS-Pof-2698 | Poecilia formosa | 74.73 | 4e-88 | 266 |
LLPS-Leo-3618 | Lepisosteus oculatus | 74.32 | 4e-88 | 265 |
LLPS-Lac-0832 | Latimeria chalumnae | 74.13 | 6e-98 | 291 |
LLPS-Tar-1412 | Takifugu rubripes | 73.63 | 6e-86 | 260 |
LLPS-Xim-0853 | Xiphophorus maculatus | 72.08 | 5e-89 | 268 |
LLPS-Scm-2860 | Scophthalmus maximus | 72.08 | 6e-89 | 268 |
LLPS-Icp-3208 | Ictalurus punctatus | 72.06 | 5e-92 | 276 |
LLPS-Tag-0893 | Taeniopygia guttata | 71.91 | 6e-84 | 255 |
LLPS-Fia-3541 | Ficedula albicollis | 71.82 | 3e-78 | 239 |
LLPS-Dar-2291 | Danio rerio | 71.13 | 1e-87 | 265 |
LLPS-Anp-3225 | Anas platyrhynchos | 69.85 | 4e-61 | 194 |
LLPS-Orn-3250 | Oreochromis niloticus | 69.74 | 3e-87 | 264 |
LLPS-Scf-1299 | Scleropages formosus | 69.12 | 4e-90 | 271 |
LLPS-Pat-1882 | Pan troglodytes | 67.2 | 3e-78 | 241 |
LLPS-Ere-0326 | Erinaceus europaeus | 65.8 | 1e-77 | 239 |
LLPS-Meg-2783 | Meleagris gallopavo | 65.54 | 2e-61 | 196 |
LLPS-Maf-2520 | Macaca fascicularis | 64.97 | 8e-79 | 242 |
LLPS-Mup-2894 | Mustela putorius furo | 64.65 | 3e-79 | 243 |
LLPS-Ten-0649 | Tetraodon nigroviridis | 63.93 | 2e-80 | 246 |
LLPS-Cis-1320 | Ciona savignyi | 56.72 | 1e-64 | 206 |
LLPS-Cii-2378 | Ciona intestinalis | 56.0 | 1e-66 | 211 |
LLPS-Cae-0732 | Caenorhabditis elegans | 53.71 | 3e-51 | 171 |
LLPS-Hov-1797 | Hordeum vulgare | 53.64 | 3e-21 | 93.2 |
LLPS-Drm-1299 | Drosophila melanogaster | 52.74 | 6e-59 | 191 |
LLPS-Abg-0010 | Absidia glauca | 49.15 | 1e-37 | 136 |
LLPS-Gas-1003 | Galdieria sulphuraria | 47.51 | 2e-32 | 122 |
LLPS-Glm-0375 | Glycine max | 46.37 | 1e-35 | 131 |
LLPS-Lep-0783 | Leersia perrieri | 46.37 | 2e-32 | 122 |
LLPS-Pot-0009 | Populus trichocarpa | 46.37 | 3e-34 | 127 |
LLPS-Phv-0867 | Phaseolus vulgaris | 46.37 | 3e-34 | 127 |
LLPS-Brd-2009 | Brachypodium distachyon | 46.29 | 4e-33 | 124 |
LLPS-Zem-1374 | Zea mays | 46.29 | 1e-30 | 117 |
LLPS-Hea-2322 | Helianthus annuus | 45.81 | 1e-33 | 125 |
LLPS-Via-1905 | Vigna angularis | 45.81 | 4e-34 | 129 |
LLPS-Vir-0570 | Vigna radiata | 45.81 | 8e-34 | 127 |
LLPS-Mae-2327 | Manihot esculenta | 45.81 | 2e-34 | 127 |
LLPS-Orb-2121 | Oryza barthii | 45.71 | 4e-31 | 119 |
LLPS-Orni-0358 | Oryza nivara | 45.71 | 4e-31 | 119 |
LLPS-Orgl-0457 | Oryza glumaepatula | 45.71 | 4e-31 | 119 |
LLPS-Orp-1451 | Oryza punctata | 45.71 | 2e-31 | 119 |
LLPS-Coc-0267 | Corchorus capsularis | 45.71 | 3e-32 | 122 |
LLPS-Orr-0511 | Oryza rufipogon | 45.71 | 3e-31 | 119 |
LLPS-Orm-1423 | Oryza meridionalis | 45.71 | 4e-31 | 119 |
LLPS-Gor-0588 | Gossypium raimondii | 45.25 | 2e-33 | 125 |
LLPS-Sei-2049 | Setaria italica | 45.14 | 2e-30 | 117 |
LLPS-Orbr-1395 | Oryza brachyantha | 45.08 | 1e-33 | 125 |
LLPS-Thc-2420 | Theobroma cacao | 45.03 | 1e-29 | 117 |
LLPS-Sol-1503 | Solanum lycopersicum | 44.51 | 4e-32 | 124 |
LLPS-Amt-0495 | Amborella trichopoda | 44.44 | 5e-34 | 126 |
LLPS-Prp-0213 | Prunus persica | 44.39 | 3e-36 | 132 |
LLPS-Chr-0821 | Chlamydomonas reinhardtii | 44.27 | 3e-39 | 140 |
LLPS-Nia-2171 | Nicotiana attenuata | 44.21 | 2e-33 | 125 |
LLPS-Sot-2185 | Solanum tuberosum | 44.13 | 2e-32 | 122 |
LLPS-Cus-1938 | Cucumis sativus | 44.13 | 7e-33 | 124 |
LLPS-Viv-0508 | Vitis vinifera | 44.13 | 3e-32 | 122 |
LLPS-Sob-1577 | Sorghum bicolor | 44.02 | 4e-34 | 127 |
LLPS-Brn-0594 | Brassica napus | 43.96 | 2e-32 | 122 |
LLPS-Brr-2819 | Brassica rapa | 43.96 | 2e-32 | 122 |
LLPS-Sem-2153 | Selaginella moellendorffii | 43.89 | 8e-28 | 110 |
LLPS-Tra-2253 | Triticum aestivum | 43.62 | 1e-32 | 123 |
LLPS-Bro-3056 | Brassica oleracea | 43.58 | 2e-31 | 120 |
LLPS-Ori-0311 | Oryza indica | 42.93 | 1e-32 | 123 |
LLPS-Dac-2111 | Daucus carota | 42.93 | 3e-33 | 124 |
LLPS-Ors-2274 | Oryza sativa | 42.93 | 1e-32 | 123 |
LLPS-Org-0992 | Oryza glaberrima | 42.93 | 1e-32 | 123 |
LLPS-Php-2462 | Physcomitrella patens | 42.86 | 1e-29 | 115 |
LLPS-Art-0193 | Arabidopsis thaliana | 42.63 | 1e-31 | 120 |
LLPS-Arl-0576 | Arabidopsis lyrata | 42.11 | 7e-31 | 118 |
LLPS-Mua-2206 | Musa acuminata | 41.87 | 5e-31 | 119 |
LLPS-Met-1826 | Medicago truncatula | 41.67 | 5e-31 | 119 |
LLPS-Chc-0990 | Chondrus crispus | 40.53 | 1e-29 | 116 |
LLPS-Osl-0907 | Ostreococcus lucimarinus | 39.89 | 2e-24 | 101 |
LLPS-Cym-0969 | Cyanidioschyzon merolae | 38.22 | 1e-22 | 97.4 |