LLPS-Thc-2281
TCM_026351
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Protein Name: | GDP-mannose 3,5-epimerase 1 |
Gene Name: | TCM_026351 |
Ensembl Gene: | TCM_026351 |
Ensembl Protein: | EOY11078 |
Organism: | Theobroma cacao |
Taxa ID: | 3641 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | EOY11078 | EOY11078 |
UniProt | A0A061F2D5, A0A061F2D5_THECC | |
GeneBank | CM001883 | EOY11078.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MVALSLFIER RALQASQSIP IRLLSQVSTL SRSLHLSLLF KSSQLLTRFR MGSADGTNYG 60 61 AFTYEALERE PYWPSEKLRI SITGAGGFIA SHIARRLKSE GHYIIASDWK KNEHMTEDMF 120 121 CHEFHLADLR VMDNCLKVTN GVDHVFNLAA DMGGMGFIQS NHSVIMYNNT MISFNMLEAA 180 181 RINGVKRFFY ASSACIYPEF KQLETNVSLK ESDAWPAEPQ DAYGLEKLAT EELCKHYTKD 240 241 FGIECRIGRF HNIYGPFGTW KGGREKAPAA FCRKAITSTD KFEMWGDGLQ TRSFTFIDEC 300 301 VEGVLRLTKS DFREPVNIGS DEMVSMNEMA EIVLSFEDKK LPIHHIPGPE GVRGRNSDNT 360 361 LIKEKLGWAP TMRLKDGLRI TYFWIKEQIE KEKSQGIDLT IYGSSKVVGT QAPVQLGSLR 420 421 AADGKE 426 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGTGGCTC TCTCTCTATT TATAGAAAGG AGAGCGTTAC AGGCTTCACA ATCCATACCC 60 61 ATTCGTCTCC TATCTCAAGT TTCCACCCTT TCTCGCTCCT TGCATTTATC TCTTCTCTTC 120 121 AAAAGTTCCC AACTTTTAAC TCGTTTCAGA ATGGGAAGTG CTGATGGGAC CAACTATGGT 180 181 GCTTTCACCT ATGAGGCCCT GGAGAGGGAG CCTTACTGGC CATCTGAGAA ACTCCGAATT 240 241 TCAATTACTG GGGCAGGTGG GTTCATTGCA TCCCACATTG CTCGACGTCT GAAGAGTGAA 300 301 GGCCATTACA TCATTGCTTC TGACTGGAAG AAGAATGAGC ACATGACTGA AGATATGTTT 360 361 TGTCATGAAT TCCATCTCGC TGATCTTCGG GTCATGGACA ATTGCTTGAA AGTTACCAAT 420 421 GGAGTGGATC ATGTTTTCAA CCTTGCTGCC GATATGGGTG GGATGGGTTT TATTCAGTCC 480 481 AATCACTCTG TCATTATGTA CAACAACACA ATGATCAGTT TCAACATGCT TGAGGCTGCT 540 541 AGGATCAACG GAGTTAAGAG GTTTTTCTAT GCCTCCAGTG CTTGTATCTA CCCTGAATTT 600 601 AAGCAGTTGG AGACTAATGT GAGCTTGAAA GAATCCGATG CCTGGCCTGC TGAGCCTCAA 660 661 GATGCTTATG GCTTGGAGAA GCTTGCGACA GAGGAGTTGT GCAAGCACTA CACTAAAGAC 720 721 TTTGGAATTG AATGTCGCAT TGGACGGTTC CACAACATTT ATGGCCCTTT TGGAACATGG 780 781 AAAGGTGGAA GGGAGAAGGC TCCAGCTGCC TTTTGCAGAA AAGCTATTAC ATCCACCGAT 840 841 AAGTTTGAGA TGTGGGGAGA TGGTCTTCAG ACCCGATCTT TCACCTTCAT TGATGAATGT 900 901 GTAGAAGGTG TACTTAGATT GACGAAGTCT GATTTCCGTG AGCCTGTGAA CATTGGAAGC 960 961 GATGAGATGG TTAGCATGAA TGAGATGGCT GAGATTGTTC TTAGCTTTGA GGATAAAAAG 1020 1021 CTTCCAATTC ATCATATCCC TGGTCCAGAG GGTGTCCGTG GTCGTAATTC AGACAATACA 1080 1081 TTGATCAAAG AAAAACTTGG GTGGGCTCCC ACGATGAGGT TGAAGGATGG CCTGAGAATT 1140 1141 ACATACTTCT GGATCAAGGA ACAAATTGAG AAAGAGAAGT CTCAAGGCAT TGACCTGACT 1200 1201 ATTTATGGGT CATCTAAGGT GGTGGGAACT CAAGCACCAG TTCAGTTGGG CTCACTTCGT 1260 1261 GCTGCAGACG GCAAAGAATG A 1281 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Gor-0311 | Gossypium raimondii | 97.07 | 0.0 | 774 |
LLPS-Mae-0410 | Manihot esculenta | 96.81 | 0.0 | 771 |
LLPS-Coc-1829 | Corchorus capsularis | 96.54 | 0.0 | 766 |
LLPS-Viv-1562 | Vitis vinifera | 95.74 | 0.0 | 764 |
LLPS-Hea-1014 | Helianthus annuus | 95.51 | 0.0 | 638 |
LLPS-Pot-1756 | Populus trichocarpa | 95.48 | 0.0 | 760 |
LLPS-Prp-1448 | Prunus persica | 94.95 | 0.0 | 756 |
LLPS-Cus-1158 | Cucumis sativus | 94.95 | 0.0 | 759 |
LLPS-Amt-0372 | Amborella trichopoda | 94.71 | 0.0 | 756 |
LLPS-Lep-1525 | Leersia perrieri | 93.92 | 0.0 | 751 |
LLPS-Sol-2338 | Solanum lycopersicum | 93.88 | 0.0 | 753 |
LLPS-Nia-2446 | Nicotiana attenuata | 93.62 | 0.0 | 752 |
LLPS-Dac-0111 | Daucus carota | 93.62 | 0.0 | 750 |
LLPS-Orp-1092 | Oryza punctata | 93.42 | 0.0 | 752 |
LLPS-Orbr-0497 | Oryza brachyantha | 93.39 | 0.0 | 748 |
LLPS-Sei-0164 | Setaria italica | 93.14 | 0.0 | 751 |
LLPS-Ors-0590 | Oryza sativa | 93.12 | 0.0 | 747 |
LLPS-Orr-1999 | Oryza rufipogon | 93.12 | 0.0 | 747 |
LLPS-Orm-2013 | Oryza meridionalis | 93.12 | 0.0 | 747 |
LLPS-Org-2112 | Oryza glaberrima | 93.12 | 0.0 | 747 |
LLPS-Orb-0842 | Oryza barthii | 93.12 | 0.0 | 747 |
LLPS-Orgl-1609 | Oryza glumaepatula | 93.12 | 0.0 | 747 |
LLPS-Glm-0163 | Glycine max | 93.09 | 0.0 | 751 |
LLPS-Sob-2268 | Sorghum bicolor | 92.86 | 0.0 | 746 |
LLPS-Ori-2229 | Oryza indica | 92.86 | 0.0 | 745 |
LLPS-Orni-1821 | Oryza nivara | 92.86 | 0.0 | 745 |
LLPS-Brr-1951 | Brassica rapa | 92.72 | 0.0 | 733 |
LLPS-Mua-0077 | Musa acuminata | 92.37 | 0.0 | 747 |
LLPS-Brd-1567 | Brachypodium distachyon | 92.35 | 0.0 | 741 |
LLPS-Zem-0462 | Zea mays | 92.33 | 0.0 | 743 |
LLPS-Met-1387 | Medicago truncatula | 92.33 | 0.0 | 739 |
LLPS-Hov-1554 | Hordeum vulgare | 92.33 | 0.0 | 720 |
LLPS-Phv-0708 | Phaseolus vulgaris | 92.29 | 0.0 | 744 |
LLPS-Tra-1948 | Triticum aestivum | 92.06 | 0.0 | 733 |
LLPS-Tru-1484 | Triticum urartu | 91.78 | 0.0 | 715 |
LLPS-Via-1555 | Vigna angularis | 91.76 | 0.0 | 745 |
LLPS-Arl-1059 | Arabidopsis lyrata | 91.51 | 0.0 | 740 |
LLPS-Sot-2203 | Solanum tuberosum | 91.49 | 0.0 | 735 |
LLPS-Art-0516 | Arabidopsis thaliana | 91.25 | 0.0 | 735 |
LLPS-Bro-0856 | Brassica oleracea | 91.08 | 0.0 | 735 |
LLPS-Brn-0261 | Brassica napus | 91.08 | 0.0 | 738 |
LLPS-Sem-0037 | Selaginella moellendorffii | 88.98 | 0.0 | 706 |
LLPS-Vir-0124 | Vigna radiata | 87.77 | 0.0 | 700 |
LLPS-Php-2255 | Physcomitrella patens | 87.47 | 0.0 | 690 |
LLPS-Chr-0014 | Chlamydomonas reinhardtii | 76.39 | 0.0 | 603 |
LLPS-Osl-1059 | Ostreococcus lucimarinus | 70.28 | 0.0 | 553 |
LLPS-Chc-0017 | Chondrus crispus | 68.14 | 1e-171 | 492 |
LLPS-Gas-0813 | Galdieria sulphuraria | 67.35 | 8e-175 | 500 |
LLPS-Cym-0195 | Cyanidioschyzon merolae | 64.74 | 4e-174 | 499 |
LLPS-Miv-1088 | Microbotryum violaceum | 28.62 | 2e-20 | 97.4 |