LLPS-Thc-2087
TCM_010631
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Nucleoporin GLE1, putative isoform 1 |
| Gene Name: | TCM_010631 |
| Ensembl Gene: | TCM_010631 |
| Ensembl Protein: | EOY00702 |
| Organism: | Theobroma cacao |
| Taxa ID: | 3641 |
| LLPS Type: | LLPS regulator |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| P-body, Stress granule | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | EOY00702 | EOY00702 |
| Ensembl | EOY00703 | EOY00703 |
| UniProt | A0A061E8P3, A0A061E8P3_THECC | |
| GeneBank | CM001880 | EOY00702.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MWLDSEIGSA ASLWEFENIG VLGYFTMGVV KLEIRCPQTV NGIGLDPDPD WSFDALLPEI 60 61 DSLEKKLNVS SSVPLPFTKT KSREFYAENG IKRSPNAFVM RISDEEFEDS EGEAEEVHDR 120 121 GLVKATRFNC DEFYLSDDDS DNESSLQVQT YFMNEVGLVE SALVELTHEH QLGVREEIRS 180 181 KISSLETDFM NESEKSSSAH VKVDKYREAR REVERKFDVQ YQRRLAEALD NHLTAVQRDH 240 241 ELKSQIAERR IRSDAAHEEA KRREKALQEE RLRQEKAKAE AEMQAKLKAE EAKRVALEAE 300 301 RRAAKEAAER EADKASKANT SEVSQTEALG GPTATSSVVL NAQPKGSDAD KTMKSYSAGN 360 361 MLRAAESALN LERERLQKLK ELDERNQSLR SSSNEDFGST ERHIARLIRQ IRGTKDNVRT 420 421 KATELIKIFN NPRCPQTISI ASFAKKVVSH CESPDNAAFA CGHVIVLVTS QFPQAMDLLV 480 481 AELQRACIYT VPKHISYSKS AFESKVAYWK AIGYREDDGK IESTKDYLKR LESYMKLYGA 540 541 LVQTEVAGGQ NVHGLKEGWA WLARFLNALP ANIYTAVALN AFLQMAGFAL FRKYKSQFMK 600 601 LLNIISENFL NALRAQQDPE LRPIMAEIQS YLEDKKFLQE PEGRALQGSL LSSVMVPDSD 660 661 YQESYHQPNR YFY 673 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGGAGTTG TTAAGTTGGA AATTCGCTGC CCTCAAACCG TTAATGGAAT CGGTCTTGAT 60 61 CCCGACCCGG ATTGGAGTTT CGATGCTTTG TTACCAGAGA TCGATTCCTT GGAAAAGAAG 120 121 CTCAATGTCT CTTCTTCAGT TCCTTTGCCT TTTACAAAAA CAAAATCAAG AGAATTTTAT 180 181 GCGGAAAATG GCATCAAGAG GAGCCCAAAT GCATTTGTAA TGAGAATATC TGATGAGGAG 240 241 TTTGAGGATA GTGAAGGTGA GGCTGAGGAG GTTCATGATC GAGGGTTAGT GAAAGCTACA 300 301 CGATTTAACT GCGATGAATT TTATTTGAGT GATGATGATT CTGACAATGA ATCGTCTCTT 360 361 CAAGTACAAA CCTACTTCAT GAATGAGGTG GGATTGGTGG AGAGTGCTTT AGTTGAGTTA 420 421 ACCCATGAGC ATCAACTTGG AGTTAGGGAG GAAATTAGGA GCAAAATCTC GTCATTAGAG 480 481 ACAGATTTCA TGAATGAGAG CGAAAAGTCT TCCTCTGCAC ATGTGAAAGT TGACAAATAT 540 541 AGAGAAGCAA GGCGGGAAGT GGAGAGGAAA TTTGATGTTC AGTATCAACG CAGACTTGCA 600 601 GAAGCACTTG ATAATCACTT GACTGCTGTC CAGCGGGACC ATGAACTCAA ATCACAAATA 660 661 GCAGAAAGGA GAATACGAAG TGATGCAGCA CATGAAGAGG CCAAGAGAAG GGAAAAGGCA 720 721 CTTCAAGAAG AAAGACTACG CCAAGAAAAG GCCAAAGCTG AGGCAGAGGC TAAACTTAAA 780 781 GCTGAGGAAG CCAAAAGAGT TGCTTTGGAA GCTGAGAGGA GAGCAGCAAA AGAAGCAGCA 840 841 GAAAGGGAAG CAGATAAAGC CTCAAAAGCT AATACTTCTG AAGTGTCACA AACAGAAGCT 900 901 TTAGGAGGCC CAACGGCAAC TAGTTCAGTA GTTTTAAATG CTCAGCCCAA GGGCTCTGAT 960 961 GCTGATAAAA CAATGAAGTC ATATTCAGCA GGTAACATGC TCAGGGCTGC AGAGAGTGCT 1020 1021 TTAAATCTAG AGAGGGAAAG ACTACAAAAG TTAAAAGAGT TGGATGAAAG AAACCAATCA 1080 1081 CTGAGATCAA GCTCAAATGA GGATTTTGGC AGCACTGAAA GGCATATTGC GAGGTTGATA 1140 1141 AGACAAATAA GGGGTACAAA AGACAATGTC AGAACAAAAG CCACTGAGCT TATAAAGATT 1200 1201 TTCAACAATC CTCGTTGCCC TCAGACTATC AGCATTGCAT CTTTTGCTAA GAAGGTTGTT 1260 1261 TCTCACTGTG AAAGCCCTGA TAATGCTGCC TTTGCCTGTG GTCATGTCAT TGTCCTTGTA 1320 1321 ACATCGCAGT TCCCACAAGC AATGGATCTT CTTGTTGCTG AACTACAAAG GGCTTGCATT 1380 1381 TACACTGTCC CAAAGCATAT ATCATACTCA AAGTCGGCAT TTGAATCGAA AGTGGCATAC 1440 1441 TGGAAGGCTA TAGGATACCG AGAAGACGAT GGGAAGATTG AAAGTACGAA GGATTATTTG 1500 1501 AAACGGTTGG AATCTTACAT GAAGCTGTAC GGGGCACTGG TTCAGACTGA GGTTGCAGGT 1560 1561 GGCCAAAATG TTCATGGGCT TAAGGAAGGT TGGGCATGGC TTGCTAGGTT CCTAAATGCA 1620 1621 CTCCCTGCCA ATATTTATAC TGCTGTGGCT TTGAATGCAT TTCTGCAAAT GGCAGGCTTT 1680 1681 GCTCTCTTCA GAAAATACAA ATCTCAGTTC ATGAAGTTGC TGAATATCAT CTCCGAGAAC 1740 1741 TTTCTAAATG CCTTGAGAGC CCAACAAGAT CCAGAGCTGA GGCCTATTAT GGCCGAGATT 1800 1801 CAGTCTTACT TGGAAGATAA GAAATTCCTT CAAGAACCAG AGGGAAGGGC TTTGCAAGGT 1860 1861 TCTTTGTTAT CAAGTGTCAT GGTGCCTGAC TCAGATTACC AAGAGTCATA TCATCAACCA 1920 1921 AACAGATATT TCTACTAA 1938 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Coc-0770 | Corchorus capsularis | 83.51 | 0.0 | 937 |
| LLPS-Gor-2046 | Gossypium raimondii | 76.27 | 0.0 | 860 |
| LLPS-Prp-1968 | Prunus persica | 70.9 | 3e-148 | 452 |
| LLPS-Viv-1682 | Vitis vinifera | 64.77 | 3e-124 | 378 |
| LLPS-Mua-0634 | Musa acuminata | 63.93 | 9e-43 | 155 |
| LLPS-Pot-0258 | Populus trichocarpa | 63.12 | 0.0 | 733 |
| LLPS-Mae-0080 | Manihot esculenta | 62.81 | 0.0 | 673 |
| LLPS-Met-1441 | Medicago truncatula | 59.59 | 1e-120 | 380 |
| LLPS-Sot-1577 | Solanum tuberosum | 57.3 | 2e-104 | 326 |
| LLPS-Phv-1085 | Phaseolus vulgaris | 56.42 | 0.0 | 604 |
| LLPS-Vir-2051 | Vigna radiata | 55.56 | 0.0 | 594 |
| LLPS-Via-0024 | Vigna angularis | 55.07 | 0.0 | 602 |
| LLPS-Dac-2359 | Daucus carota | 54.14 | 4e-89 | 308 |
| LLPS-Glm-2527 | Glycine max | 53.06 | 0.0 | 571 |
| LLPS-Cus-1922 | Cucumis sativus | 52.82 | 0.0 | 553 |
| LLPS-Nia-2309 | Nicotiana attenuata | 52.42 | 0.0 | 560 |
| LLPS-Sob-0516 | Sorghum bicolor | 51.3 | 1e-28 | 124 |
| LLPS-Sol-2117 | Solanum lycopersicum | 50.0 | 0.0 | 548 |
| LLPS-Amt-1462 | Amborella trichopoda | 49.07 | 8e-97 | 318 |
| LLPS-Bro-2444 | Brassica oleracea | 48.93 | 1e-151 | 459 |
| LLPS-Arl-1935 | Arabidopsis lyrata | 48.85 | 8e-164 | 491 |
| LLPS-Zem-1691 | Zea mays | 48.5 | 2e-75 | 260 |
| LLPS-Sei-2217 | Setaria italica | 48.12 | 2e-74 | 257 |
| LLPS-Brr-2048 | Brassica rapa | 47.93 | 9e-155 | 468 |
| LLPS-Art-2315 | Arabidopsis thaliana | 47.81 | 7e-163 | 489 |
| LLPS-Lep-1902 | Leersia perrieri | 47.57 | 5e-72 | 253 |
| LLPS-Orbr-1983 | Oryza brachyantha | 47.39 | 6e-73 | 253 |
| LLPS-Brn-3355 | Brassica napus | 47.21 | 3e-152 | 461 |
| LLPS-Hea-0204 | Helianthus annuus | 47.02 | 2e-173 | 518 |
| LLPS-Brd-2173 | Brachypodium distachyon | 45.76 | 2e-72 | 252 |
| LLPS-Sem-2298 | Selaginella moellendorffii | 44.79 | 7e-14 | 79.3 |
| LLPS-Tra-2186 | Triticum aestivum | 44.44 | 6e-70 | 245 |
| LLPS-Tru-0866 | Triticum urartu | 44.44 | 7e-72 | 243 |
| LLPS-Orgl-2242 | Oryza glumaepatula | 44.01 | 2e-103 | 333 |
| LLPS-Orni-1823 | Oryza nivara | 43.61 | 3e-104 | 335 |
| LLPS-Php-1006 | Physcomitrella patens | 41.73 | 8e-66 | 235 |
| LLPS-Orb-2403 | Oryza barthii | 41.6 | 1e-115 | 367 |
| LLPS-Ors-0759 | Oryza sativa | 41.54 | 2e-117 | 372 |
| LLPS-Orr-1705 | Oryza rufipogon | 41.44 | 2e-116 | 369 |
| LLPS-Org-0378 | Oryza glaberrima | 41.44 | 1e-116 | 369 |
| LLPS-Orm-0466 | Oryza meridionalis | 40.94 | 2e-116 | 374 |
| LLPS-Ori-0782 | Oryza indica | 40.79 | 1e-116 | 372 |
| LLPS-Lac-2217 | Latimeria chalumnae | 37.86 | 4e-14 | 80.1 |
| LLPS-Gas-1195 | Galdieria sulphuraria | 35.0 | 2e-24 | 112 |
| LLPS-Dar-0058 | Danio rerio | 35.0 | 2e-25 | 115 |
| LLPS-Mup-4133 | Mustela putorius furo | 34.25 | 3e-15 | 83.6 |
| LLPS-Scf-3774 | Scleropages formosus | 34.07 | 9e-23 | 107 |
| LLPS-Pof-2647 | Poecilia formosa | 34.03 | 4e-22 | 105 |
| LLPS-Osl-1413 | Ostreococcus lucimarinus | 33.99 | 2e-42 | 162 |
| LLPS-Gaga-3719 | Gallus gallus | 33.98 | 4e-24 | 112 |
| LLPS-Chr-1397 | Chlamydomonas reinhardtii | 33.83 | 3e-31 | 133 |
| LLPS-Orn-3854 | Oreochromis niloticus | 33.51 | 3e-22 | 105 |
| LLPS-Xim-3340 | Xiphophorus maculatus | 33.33 | 1e-21 | 104 |
| LLPS-Leo-1317 | Lepisosteus oculatus | 33.14 | 1e-21 | 103 |
| LLPS-Ten-2843 | Tetraodon nigroviridis | 33.14 | 3e-20 | 99.4 |
| LLPS-Meg-2224 | Meleagris gallopavo | 33.01 | 1e-23 | 110 |
| LLPS-Myl-0291 | Myotis lucifugus | 32.61 | 1e-22 | 107 |
| LLPS-Orc-0455 | Oryctolagus cuniculus | 32.41 | 5e-22 | 105 |
| LLPS-Cym-0899 | Cyanidioschyzon merolae | 32.32 | 8e-17 | 89.0 |
| LLPS-Fec-4103 | Felis catus | 32.17 | 1e-22 | 107 |
| LLPS-Fud-1364 | Fukomys damarensis | 32.02 | 1e-20 | 100 |
| LLPS-Tar-3063 | Takifugu rubripes | 32.0 | 2e-21 | 103 |
| LLPS-Aim-2588 | Ailuropoda melanoleuca | 31.94 | 4e-22 | 105 |
| LLPS-Urm-3284 | Ursus maritimus | 31.94 | 2e-22 | 106 |
| LLPS-Asm-2125 | Astyanax mexicanus | 31.88 | 1e-22 | 107 |
| LLPS-Drm-1837 | Drosophila melanogaster | 31.87 | 2e-14 | 81.3 |
| LLPS-Paa-3751 | Papio anubis | 31.8 | 2e-22 | 106 |
| LLPS-Icp-0439 | Ictalurus punctatus | 31.64 | 2e-19 | 97.1 |
| LLPS-Mea-1828 | Mesocricetus auratus | 31.53 | 2e-22 | 106 |
| LLPS-Gaa-0232 | Gasterosteus aculeatus | 31.51 | 6e-21 | 102 |
| LLPS-Orl-1377 | Oryzias latipes | 31.4 | 7e-21 | 101 |
| LLPS-Chc-0642 | Chondrus crispus | 31.4 | 1e-11 | 68.2 |
| LLPS-Cea-1516 | Cercocebus atys | 31.22 | 3e-22 | 105 |
| LLPS-Chs-2688 | Chlorocebus sabaeus | 31.22 | 4e-22 | 105 |
| LLPS-Maf-2872 | Macaca fascicularis | 31.22 | 4e-22 | 105 |
| LLPS-Hos-1209 | Homo sapiens | 31.22 | 3e-22 | 105 |
| LLPS-Rhb-3066 | Rhinopithecus bieti | 31.22 | 3e-22 | 105 |
| LLPS-Mam-0980 | Macaca mulatta | 31.22 | 3e-22 | 105 |
| LLPS-Caf-2085 | Canis familiaris | 31.22 | 8e-21 | 101 |
| LLPS-Poa-2390 | Pongo abelii | 31.22 | 3e-22 | 105 |
| LLPS-Pes-1680 | Pelodiscus sinensis | 31.16 | 1e-22 | 107 |
| LLPS-Ora-2764 | Ornithorhynchus anatinus | 31.05 | 2e-21 | 103 |
| LLPS-Gog-2787 | Gorilla gorilla | 31.05 | 3e-22 | 105 |
| LLPS-Loa-1569 | Loxodonta africana | 31.05 | 1e-22 | 107 |
| LLPS-Man-4421 | Macaca nemestrina | 31.05 | 3e-22 | 105 |
| LLPS-Pat-3532 | Pan troglodytes | 31.05 | 3e-22 | 105 |
| LLPS-Nol-4140 | Nomascus leucogenys | 31.05 | 3e-22 | 105 |
| LLPS-Cas-1038 | Carlito syrichta | 31.03 | 2e-21 | 102 |
| LLPS-Tut-1498 | Tursiops truncatus | 31.02 | 2e-21 | 103 |
| LLPS-Cap-4348 | Cavia porcellus | 31.02 | 3e-20 | 99.8 |
| LLPS-Caj-2293 | Callithrix jacchus | 30.99 | 6e-22 | 105 |
| LLPS-Mod-1047 | Monodelphis domestica | 30.99 | 4e-21 | 102 |
| LLPS-Sus-1462 | Sus scrofa | 30.73 | 4e-22 | 105 |
| LLPS-Mum-3260 | Mus musculus | 30.73 | 5e-22 | 105 |
| LLPS-Otg-3018 | Otolemur garnettii | 30.73 | 5e-22 | 105 |
| LLPS-Ict-4679 | Ictidomys tridecemlineatus | 30.73 | 4e-22 | 105 |
| LLPS-Cii-1976 | Ciona intestinalis | 30.54 | 2e-18 | 89.0 |
| LLPS-Anc-3245 | Anolis carolinensis | 30.54 | 3e-18 | 93.2 |
| LLPS-Scm-2641 | Scophthalmus maximus | 30.45 | 8e-23 | 107 |
| LLPS-Fia-1206 | Ficedula albicollis | 30.37 | 4e-19 | 95.9 |
| LLPS-Tag-2801 | Taeniopygia guttata | 30.37 | 8e-20 | 97.8 |
| LLPS-Bot-3709 | Bos taurus | 30.24 | 6e-21 | 101 |
| LLPS-Ran-3935 | Rattus norvegicus | 30.24 | 2e-21 | 103 |
| LLPS-Ova-3848 | Ovis aries | 30.14 | 5e-21 | 102 |
| LLPS-Xet-2297 | Xenopus tropicalis | 30.11 | 4e-17 | 89.7 |
| LLPS-Eqc-0233 | Equus caballus | 29.9 | 2e-21 | 103 |
| LLPS-Aon-4719 | Aotus nancymaae | 29.82 | 2e-21 | 102 |
| LLPS-Sah-3436 | Sarcophilus harrisii | 28.98 | 1e-11 | 71.6 |
| LLPS-Mal-2445 | Mandrillus leucophaeus | 25.87 | 2e-10 | 68.2 |
| LLPS-Dio-3839 | Dipodomys ordii | 25.85 | 2e-10 | 68.2 |