DrLLPS - Data resource of LLPS

LLPS-Thc-1479
TCM_016294

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	RNA-binding family protein
Gene Name:	TCM_016294
Ensembl Gene:	TCM_016294
Ensembl Protein:	EOY24793
Organism:	Theobroma cacao
Taxa ID:	3641
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nuclear speckle	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Mus musculus	LLPS-Mum-1140	Q80YR5	Client	Nuclear speckle	46.84	6e-15	79.7

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	EOY24793	EOY24793
UniProt		A0A061G5X1, A0A061G5X1_THECC
GeneBank	CM001881	EOY24793.1
RefSeq	XM_007040230.2	XP_007040292.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MSYSRETRSV SPARGRRSRS LSRSRRSRSR SRSRSQDASN PGNNLYVTGL STRVTTADLE 60 61 KYFGNEGKVV ECHLVTDPRT RESRGFAFVT METVEGAERC IKYLNRSVLE GRLITVEKAK 120 121 RSRGRTPTPG RYHGLRDRRG QGRRRSRSYS PRRYDRDYHS RGRQGRSRSR SPYGRKRDDY 180 181 DSYRRRRERS LSGDGSGYRR 200
Nucleotide CDS Sequence (FASTA)
1 ATGTCTTATT CAAGGGAAAC AAGGTCAGTT TCACCGGCAA GAGGACGCCG ATCAAGGTCA 60 61 TTGTCAAGGT CCCGACGGAG CCGCTCCAGG TCTAGGAGCC GATCTCAGGA TGCATCCAAT 120 121 CCAGGGAATA ACTTATATGT GACTGGCTTA TCCACTAGGG TTACTACTGC CGATCTTGAG 180 181 AAGTATTTTG GCAATGAAGG AAAGGTTGTG GAGTGCCATC TGGTTACAGA TCCTCGCACC 240 241 AGAGAATCTC GTGGATTTGC CTTTGTGACC ATGGAAACTG TTGAGGGTGC AGAACGCTGC 300 301 ATCAAGTATT TGAATCGATC CGTGCTTGAA GGTCGATTGA TCACTGTGGA AAAGGCAAAA 360 361 AGGTCCAGAG GAAGAACACC AACTCCTGGG AGGTATCATG GTCTGAGAGA TAGAAGAGGA 420 421 CAAGGTCGCA GACGGTCTCG TAGCTACTCA CCTCGACGAT ATGATAGAGA TTATCATTCA 480 481 AGGGGCAGGC AAGGGAGATC ACGCTCTCGT TCCCCCTATG GTAGGAAAAG AGATGATTAT 540 541 GACTCATACA GGAGGCGCAG AGAGCGCTCC TTGTCCGGCG ATGGCAGTGG TTATCGTAGA 600 601 TGA 603

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Coc-1905	Corchorus capsularis	85.71	4e-55	195
LLPS-Mua-0852	Musa acuminata	84.95	8e-52	173
LLPS-Gor-2522	Gossypium raimondii	83.46	1e-61	197
LLPS-Orbr-0090	Oryza brachyantha	78.49	1e-45	158
LLPS-Orp-0258	Oryza punctata	78.48	2e-36	135
LLPS-Php-0237	Physcomitrella patens	78.12	1e-44	155
LLPS-Sem-0443	Selaginella moellendorffii	77.66	2e-45	152
LLPS-Amt-0694	Amborella trichopoda	77.5	9e-37	137
LLPS-Dac-1814	Daucus carota	77.42	5e-43	153
LLPS-Orni-0323	Oryza nivara	77.42	2e-44	157
LLPS-Ori-1749	Oryza indica	77.42	1e-45	158
LLPS-Org-2264	Oryza glaberrima	77.42	2e-45	157
LLPS-Ors-0726	Oryza sativa	77.42	2e-45	158
LLPS-Orgl-1228	Oryza glumaepatula	77.22	7e-37	136
LLPS-Orb-1741	Oryza barthii	77.22	3e-37	137
LLPS-Orr-0678	Oryza rufipogon	77.22	8e-37	136
LLPS-Orm-0812	Oryza meridionalis	77.22	2e-37	136
LLPS-Zem-1786	Zea mays	77.08	4e-45	158
LLPS-Mae-0613	Manihot esculenta	76.09	2e-57	186
LLPS-Sob-2102	Sorghum bicolor	76.04	1e-43	154
LLPS-Sei-1156	Setaria italica	75.0	1e-43	154
LLPS-Brd-1653	Brachypodium distachyon	74.19	2e-43	151
LLPS-Lep-2362	Leersia perrieri	74.19	3e-40	147
LLPS-Brr-0927	Brassica rapa	74.19	9e-39	144
LLPS-Viv-0725	Vitis vinifera	73.96	1e-40	144
LLPS-Pot-1676	Populus trichocarpa	73.12	3e-40	143
LLPS-Tra-3046	Triticum aestivum	72.29	6e-36	130
LLPS-Arl-2182	Arabidopsis lyrata	70.73	2e-33	123
LLPS-Prp-0087	Prunus persica	70.53	2e-39	141
LLPS-Met-0775	Medicago truncatula	70.33	4e-37	137
LLPS-Sot-0548	Solanum tuberosum	70.21	2e-38	138
LLPS-Brn-0708	Brassica napus	69.79	2e-39	142
LLPS-Glm-0335	Glycine max	69.79	9e-40	142
LLPS-Sol-1238	Solanum lycopersicum	69.15	1e-37	136
LLPS-Art-0530	Arabidopsis thaliana	68.75	1e-38	139
LLPS-Vir-1011	Vigna radiata	68.04	2e-38	139
LLPS-Cus-0469	Cucumis sativus	68.04	4e-39	140
LLPS-Hov-1128	Hordeum vulgare	67.71	4e-37	136
LLPS-Bro-0583	Brassica oleracea	67.71	3e-38	139
LLPS-Nia-1768	Nicotiana attenuata	67.71	4e-37	134
LLPS-Phv-0442	Phaseolus vulgaris	67.71	4e-37	136
LLPS-Tru-1540	Triticum urartu	67.39	4e-36	129
LLPS-Hea-1883	Helianthus annuus	66.27	1e-31	119
LLPS-Spr-1436	Sporisorium reilianum	56.38	4e-27	110
LLPS-Miv-1142	Microbotryum violaceum	55.79	1e-29	115
LLPS-Put-0865	Puccinia triticina	53.76	2e-20	91.3
LLPS-Pug-0400	Puccinia graminis	53.76	3e-25	104
LLPS-Abg-0849	Absidia glauca	53.19	3e-29	114
LLPS-Mel-1411	Melampsora laricipopulina	52.44	9e-16	74.3
LLPS-Crn-1426	Cryptococcus neoformans	52.13	1e-24	102
LLPS-Asc-0163	Aspergillus clavatus	50.53	6e-25	103
LLPS-Asfu-0534	Aspergillus fumigatus	50.53	8e-25	103
LLPS-Trv-0716	Trichoderma virens	50.53	3e-24	102
LLPS-Nef-1337	Neosartorya fischeri	50.53	1e-24	103
LLPS-Trr-0853	Trichoderma reesei	50.53	3e-25	103
LLPS-Yal-1493	Yarrowia lipolytica	50.0	2e-23	100
LLPS-Ast-0300	Aspergillus terreus	49.48	9e-24	100
LLPS-Asf-0563	Aspergillus flavus	49.47	2e-23	99.4
LLPS-Aso-0660	Aspergillus oryzae	49.47	2e-23	99.4
LLPS-Mao-1259	Magnaporthe oryzae	49.47	2e-23	99.8
LLPS-Asn-0135	Aspergillus nidulans	49.47	2e-23	99.8
LLPS-Asni-0602	Aspergillus niger	49.47	2e-23	99.4
LLPS-Fus-0119	Fusarium solani	49.47	2e-23	99.8
LLPS-Map-0747	Magnaporthe poae	48.42	3e-23	99.4
LLPS-Gag-1271	Gaeumannomyces graminis	48.42	1e-23	100
LLPS-Fuv-0500	Fusarium verticillioides	48.42	4e-23	99.0
LLPS-Fuo-0684	Fusarium oxysporum	48.42	4e-23	99.0
LLPS-Beb-1170	Beauveria bassiana	48.42	3e-23	99.4
LLPS-Fud-2749	Fukomys damarensis	48.19	2e-15	79.3
LLPS-Tum-0650	Tuber melanosporum	47.37	8e-25	103
LLPS-Nec-0180	Neurospora crassa	47.37	2e-21	94.4
LLPS-Blg-0054	Blumeria graminis	47.37	3e-23	99.0
LLPS-Scs-0677	Sclerotinia sclerotiorum	47.37	3e-22	96.3
LLPS-Scc-0022	Schizosaccharomyces cryophilus	47.31	2e-24	102
LLPS-Dio-1799	Dipodomys ordii	46.99	6e-15	77.8
LLPS-Cap-2926	Cavia porcellus	46.99	2e-15	79.0
LLPS-Caf-2797	Canis familiaris	46.99	2e-15	79.0
LLPS-Scj-0464	Schizosaccharomyces japonicus	46.88	7e-18	84.0
LLPS-Mum-1140	Mus musculus	46.84	2e-15	79.3
LLPS-Mea-1103	Mesocricetus auratus	46.84	6e-15	77.8
LLPS-Dos-0290	Dothistroma septosporum	46.24	3e-21	91.7
LLPS-Myl-1473	Myotis lucifugus	45.78	1e-14	77.0
LLPS-Mup-1178	Mustela putorius furo	45.78	1e-14	77.0
LLPS-Aim-3298	Ailuropoda melanoleuca	45.78	4e-15	78.2
LLPS-Mal-2177	Mandrillus leucophaeus	45.78	1e-14	76.6
LLPS-Paa-1735	Papio anubis	45.78	1e-14	76.6
LLPS-Gog-0829	Gorilla gorilla	45.78	1e-14	77.0
LLPS-Sus-3948	Sus scrofa	45.78	1e-14	77.0
LLPS-Sah-1228	Sarcophilus harrisii	45.78	8e-15	77.4
LLPS-Cea-0678	Cercocebus atys	45.78	1e-14	76.6
LLPS-Aon-1045	Aotus nancymaae	45.78	1e-14	76.6
LLPS-Chs-1081	Chlorocebus sabaeus	45.78	1e-14	76.6
LLPS-Maf-0884	Macaca fascicularis	45.78	1e-14	76.6
LLPS-Nol-0894	Nomascus leucogenys	45.78	1e-14	77.0
LLPS-Mam-0287	Macaca mulatta	45.78	1e-14	76.6
LLPS-Eqc-0592	Equus caballus	45.78	2e-14	75.9
LLPS-Poa-3165	Pongo abelii	45.78	1e-14	76.6
LLPS-Rhb-0390	Rhinopithecus bieti	45.78	9e-15	77.0
LLPS-Otg-2476	Otolemur garnettii	45.78	1e-14	76.6
LLPS-Loa-2689	Loxodonta africana	45.78	1e-14	77.0
LLPS-Anp-0440	Anas platyrhynchos	45.78	8e-15	77.0
LLPS-Fec-0655	Felis catus	45.78	1e-14	76.6
LLPS-Hos-2693	Homo sapiens	45.78	2e-14	76.3
LLPS-Urm-3912	Ursus maritimus	45.78	9e-15	77.0
LLPS-Pap-1329	Pan paniscus	45.78	1e-14	76.6
LLPS-Pat-0843	Pan troglodytes	45.78	1e-14	77.0
LLPS-Ran-3273	Rattus norvegicus	45.57	1e-14	77.0
LLPS-Dar-4097	Danio rerio	45.57	8e-14	73.9
LLPS-Coo-0297	Colletotrichum orbiculare	45.26	1e-21	94.4
LLPS-Ova-1143	Ovis aries	44.58	3e-14	75.5
LLPS-Bot-1655	Bos taurus	44.58	3e-14	75.9
LLPS-Asm-1061	Astyanax mexicanus	44.58	3e-14	75.5
LLPS-Caj-4786	Callithrix jacchus	44.3	8e-14	73.9
LLPS-Man-3352	Macaca nemestrina	44.3	9e-14	74.3
LLPS-Zyt-0774	Zymoseptoria tritici	44.21	4e-22	94.4
LLPS-Ved-0890	Verticillium dahliae	44.21	4e-21	93.2
LLPS-Drm-0285	Drosophila melanogaster	44.16	3e-12	69.7
LLPS-Phn-1176	Phaeosphaeria nodorum	43.62	4e-20	90.1
LLPS-Pytr-1562	Pyrenophora triticirepentis	43.62	1e-19	88.6
LLPS-Icp-2333	Ictalurus punctatus	43.48	2e-14	76.3
LLPS-Tag-2181	Taeniopygia guttata	43.48	7e-15	77.4
LLPS-Gaga-0579	Gallus gallus	43.48	7e-15	77.4
LLPS-Fia-1887	Ficedula albicollis	43.48	5e-15	78.2
LLPS-Mod-3015	Monodelphis domestica	43.48	6e-15	77.8
LLPS-Leo-2805	Lepisosteus oculatus	43.37	9e-14	74.3
LLPS-Gaa-0197	Gasterosteus aculeatus	42.86	2e-12	69.7
LLPS-Tar-1614	Takifugu rubripes	42.86	2e-12	70.1
LLPS-Orl-1614	Oryzias latipes	42.86	7e-12	68.2
LLPS-Ten-1425	Tetraodon nigroviridis	42.86	3e-12	69.3
LLPS-Pyt-0460	Pyrenophora teres	42.55	3e-19	87.4
LLPS-Scf-3513	Scleropages formosus	42.17	6e-13	70.5
LLPS-Anc-2160	Anolis carolinensis	42.17	3e-13	72.4
LLPS-Orn-2420	Oreochromis niloticus	42.17	6e-13	71.6
LLPS-Scm-0266	Scophthalmus maximus	42.17	2e-12	70.1
LLPS-Tut-1716	Tursiops truncatus	41.56	6e-12	68.6
LLPS-Ict-2903	Ictidomys tridecemlineatus	41.56	7e-12	68.2
LLPS-Xet-0712	Xenopus tropicalis	41.56	8e-12	68.2
LLPS-Orc-3422	Oryctolagus cuniculus	41.56	5e-12	68.6
LLPS-Scp-0490	Schizosaccharomyces pombe	41.05	1e-18	85.9
LLPS-Cogr-0507	Colletotrichum graminicola	38.4	2e-21	94.4

LLPS-Thc-1479TCM_016294

Protein Sequence

Nucleotide Sequence

LLPS-Thc-1479
TCM_016294