LLPS-Sus-a862
VPS39
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Vam6/Vps39-like protein isoform a |
| Gene Name: | VPS39 |
| Ensembl Gene: | ENSSSCG00000004731.3 |
| Ensembl Protein: | ENSSSCP00000050294.1 |
| Organism: | Sus scrofa |
| Taxa ID: | 9823 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSSSCT00000036856.1 | ENSSSCP00000050294.1 |
| Ensembl | ENSSSCT00000051894.1 | ENSSSCP00000032735.1 |
| Ensembl | ENSSSCT00000062609.1 | ENSSSCP00000032354.1 |
| Ensembl | ENSSSCT00000041359.1 | ENSSSCP00000038436.1 |
| Ensembl | ENSSSCT00000005227.3 | ENSSSCP00000005101.3 |
| UniProt | F1SFK5, F1SFK5_PIG | |
| GeneBank | DQIR01187368, AEMK02000004 | , HDB42845.1 |
| Entrez | 100513254 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MHDAFEPVPI LEKLPLQIDC LAAWEEWLLV GTKQGHLLLY RIRKDVVSAD VASPESGSCN 60 61 RFEVTLEKSN KNFSKKIQQI HVVSQFKILV SLLENNIYVH DLLTFQQITT VSKAKGASLF 120 121 TCDLQHTETG DEVLRMCVAV KKKLQLYFWK DREFHELQGD FSVPDVPKSM AWCENSICVG 180 181 FKRDYYLIRV DGKGSIKELF PTGKQLEPLV APLADGKVAV GQDDLTVVLN EEGICTQKCA 240 241 LNWTDIPVAM EHQPPYIIAV LPRYVEIRTF EPRLLVQSIE LQRPRFITSG GSNIIYVASN 300 301 HFVWRLIPVP MATQIQQLLQ DKQFELALQL AEMKDDSDSE KQQQIHHIKN LYAFNLFCQK 360 361 RFDESMQVFA KLGTDPTHVM GLYPDLLPTD YRKQLQYPNP LPVLSGAELE KAHLALIDYL 420 421 TQKRSQLVKK LNDSDHQSST SPLMEGTPTI KSKKKLLQII DTTLLKCYLH TNVALVAPLL 480 481 RLENNHCHIE ESEHVLKKAH KYSELIILYE KKGLHEKALQ VLVDQSKKAN SPLKGHERTV 540 541 QYLQHLGTEN LHLIFSYSVW VLRDFPEDGL KIFTEDLPEV ESLPRDRVLG FLIENFKSLA 600 601 IPYLEHVIHV WEETGSRFHN CLIQLYCEKV QGLMKEYLLS FPAGTAPVPA GEEEGELGEY 660 661 RRKLLLFLEI SGYYDPARLI CDFPFDGLLE ERALLLGRMG KHEQALFIYV HILKDTRMAE 720 721 EYCHKHYDQN KDGNKDVYLS LLRMYLSPPS VHCLGPIKLE LLEPQANLQA ALQVLELHHS 780 781 KLDTTKAINL LPANTQINDI RIFLEKVLEE NAQKKRFNQV LKNLLHAEFL RVQEERILHQ 840 841 QVKCIITEEK VCMVCKKKIG NSAFARYPNG VVVHYFCSKE VNPADT 886 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGCACGACG CCTTCGAGCC GGTTCCGATC CTAGAAAAAC TGCCTCTGCA AATTGACTGT 60 61 CTGGCTGCCT GGGAGGAATG GCTGCTTGTT GGAACGAAAC AAGGTCATCT TCTTCTCTAT 120 121 AGGATTCGGA AGGATGTTGG TTGCAACAGG TTTGAAGTGA CACTAGAGAA ATCCAATAAG 180 181 AACTTTTCCA AAAAGATTCA GCAGATCCAT GTGGTTTCCC AGTTTAAGAT TCTGGTCAGC 240 241 TTGTTAGAAA ATAATATTTA TGTCCACGAC CTACTGACAT TTCAACAAAT CACCACAGTT 300 301 TCCAAGGCAA AGGGAGCATC ACTGTTCACA TGTGACCTCC AGCACACAGA GACTGGTGAC 360 361 GAGGTGTTGC GGATGTGTGT GGCCGTGAAA AAGAAGCTGC AGCTCTATTT CTGGAAAGAC 420 421 AGGGAATTTC ATGAATTGCA GGGGGACTTT AGCGTACCAG ATGTACCCAA GTCCATGGCC 480 481 TGGTGTGAAA ATTCTATCTG TGTGGGCTTC AAGAGAGACT ACTACTTAAT AAGGGTGGAT 540 541 GGAAAGGGGT CCATCAAAGA GCTCTTCCCA ACAGGAAAAC AGCTGGAGCC CTTAGTTGCA 600 601 CCTCTGGCAG ATGGAAAGGT GGCCGTAGGT CAAGATGATC TCACCGTGGT GCTCAATGAG 660 661 GAGGGGATTT GCACGCAGAA GTGTGCCCTC AACTGGACGG ACATTCCAGT GGCCATGGAG 720 721 CACCAGCCTC CCTACATCAT TGCAGTGTTG CCTCGATACG TAGAGATCCG AACATTTGAG 780 781 CCAAGGCTTC TGGTCCAGAG CATTGAATTG CAAAGGCCTC GTTTCATTAC CTCGGGAGGA 840 841 TCAAACATTA TCTACGTGGC CAGCAACCAT TTTGTTTGGA GACTCATTCC AGTCCCCATG 900 901 GCAACCCAAA TCCAGCAGCT TCTCCAGGAC AAGCAGTTCG AATTGGCTCT GCAGCTCGCA 960 961 GAAATGAAGG ATGATTCTGA CAGTGAAAAG CAGCAACAGA TCCATCACAT CAAGAACTTG 1020 1021 TATGCCTTCA ACCTCTTCTG CCAGAAGCGT TTTGATGAGT CTATGCAGGT CTTTGCTAAG 1080 1081 CTTGGCACAG ATCCTACCCA TGTGATGGGC TTGTACCCAG ACCTGCTACC CACAGACTAC 1140 1141 AGGAAGCAAC TGCAGTATCC TAACCCGCTG CCTGTGCTCT CTGGGGCTGA GTTGGAGAAG 1200 1201 GCTCACTTAG CTCTGATTGA CTACCTGACA CAGAAACGAA GCCAGTTGGT GAAGAAGCTG 1260 1261 AATGACTCTG ATCACCAGTC TAGCACCTCC CCGCTCATGG AAGGCACGCC TACCATCAAA 1320 1321 TCCAAGAAGA AGCTGCTGCA GATCATTGAC ACCACGCTGC TGAAGTGCTA CCTGCACACG 1380 1381 AACGTGGCCC TGGTGGCTCC CCTGCTGCGC CTGGAGAACA ATCACTGCCA CATCGAAGAG 1440 1441 AGTGAGCACG TGCTGAAGAA GGCTCACAAG TACAGTGAGC TGATCATCCT GTATGAGAAG 1500 1501 AAGGGACTCC ACGAGAAAGC TCTGCAGGTG CTGGTGGACC AGTCCAAGAA AGCAAATTCC 1560 1561 CCTCTGAAAG GCCATGAAAG GACAGTGCAG TACCTGCAAC ATCTGGGCAC AGAAAACCTG 1620 1621 CACTTGATTT TTTCCTACTC AGTGTGGGTA CTGAGGGATT TTCCAGAGGA TGGCCTGAAG 1680 1681 ATATTTACTG AAGACCTCCC AGAGGTGGAG TCTCTGCCAC GAGACCGAGT GCTTGGCTTC 1740 1741 TTAATAGAGA ATTTTAAGAG TCTGGCTATT CCTTATCTGG AACACGTCAT CCACGTTTGG 1800 1801 GAGGAGACGG GCTCCCGGTT CCACAACTGC CTGATCCAGC TGTACTGTGA GAAGGTGCAA 1860 1861 GGTCTGATGA AGGAATATCT CCTGTCCTTC CCTGCAGGCA CAGCTCCAGT CCCTGCTGGT 1920 1921 GAGGAAGAGG GAGAACTGGG AGAATATCGA CGGAAGCTCC TCTTATTCTT GGAAATTTCT 1980 1981 GGCTACTATG ATCCAGCCCG GCTCATCTGT GATTTTCCTT TTGATGGCCT CTTAGAAGAG 2040 2041 CGTGCTCTTT TGCTGGGACG CATGGGGAAA CACGAACAAG CTCTCTTCAT CTATGTCCAC 2100 2101 ATCCTGAAGG ACACGAGGAT GGCTGAAGAG TATTGCCACA AGCATTATGA CCAAAACAAA 2160 2161 GATGGCAACA AAGATGTGTA CCTGTCCCTG CTCCGGATGT ACCTGTCACC CCCCAGTGTC 2220 2221 CACTGCCTGG GACCAATCAA GCTGGAACTG CTGGAGCCAC AAGCCAACCT CCAGGCTGCC 2280 2281 CTGCAGGTCC TCGAGCTGCA CCACAGCAAA CTGGACACCA CCAAGGCCAT CAATCTTCTG 2340 2341 CCAGCAAATA CTCAGATTAA TGATATACGC ATCTTTCTGG AAAAGGTCTT GGAAGAGAAT 2400 2401 GCGCAAAAGA AACGGTTCAA TCAAGTCCTC AAGAACCTTC TCCACGCAGA GTTCCTGAGG 2460 2461 GTCCAGGAGG AGCGGATCTT ACACCAGCAG GTGAAGTGCA TCATCACAGA GGAGAAGGTG 2520 2521 TGCATGGTGT GTAAGAAGAA AATTGGGAAT AGTGCATTTG CAAAATACCC CAACGGAGTG 2580 2581 GTCGTGCACT ACTTCTGCTC CAAAGAGGTC AACCCAGCCG ACACCTGA 2628 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Hos-a876 | Homo sapiens | 0.0 | 1806 | undefined |
| LLPS-Mum-a862 | Mus musculus | 0.0 | 1780 | undefined |