LLPS-Sus-4872
YTHDF3
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Uncharacterized protein |
| Gene Name: | YTHDF3 |
| Ensembl Gene: | ENSSSCG00000033144.1 |
| Ensembl Protein: | ENSSSCP00000048507.1 |
| Organism: | Sus scrofa |
| Taxa ID: | 9823 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| P-body, Stress granule, Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSSSCT00000046274.1 | ENSSSCP00000048507.1 |
| Ensembl | ENSSSCT00000039964.1 | ENSSSCP00000056797.1 |
| Ensembl | ENSSSCT00000055631.1 | ENSSSCP00000039459.1 |
| Ensembl | ENSSSCT00000041046.1 | ENSSSCP00000047138.1 |
| Ensembl | ENSSSCT00000059588.1 | ENSSSCP00000051803.1 |
| UniProt | A0A287B6U9, A0A287B6U9_PIG | |
| GeneBank | AEMK02000022 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSDPYMPSYY APSIGFPYSL GEAAWSTAGD QPMPYLTTYG QMSNGEHHYI PDGVFSQPGA 60 61 LGNTPPFLGQ HGFNFFPGNA DFSTWGTSGS QGQSTQSSAY SSSYGYPPSS LGRAITDGQA 120 121 GFGNDTLSKV PGISSIEQGM TGLKIGGDLT AAVTKTVGTA LSSSGMTSIA TNSVPPVSSA 180 181 APKPTSWAAI ARKPAKPQPK LKPKGNVGIG GSAVPPPPIK HNMNIGTWDE KGSVVKAPPT 240 241 QPVLPPQTII QQPQPLIQPP PLVQSQLPQQ QPQPPQPQQQ QGPQPQAQPH QVQPQQQQLQ 300 301 NRWVAPRNRG AGFNQNNGAG GENFGLGVVP VSASPSSVEV HPVLEKLKAI NNYNPKDFDW 360 361 NLKNGRVFII KSYSEDDIHR SIKYSIWCST EHGNKRLDAA YRSLNGKGPL YLLFSVNGSG 420 421 HFCGVAEMKS VVDYNAYAGV WSQDKWKGKF EVKWIFVKDV PNNQLRHIRL ENNDNKPVTN 480 481 SRDTQEVPLE KAKQVLKIIA TFKHTTSIFD DFAHYEKRQE EEEAMRRERN RNKQ 534 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCAGATC CGTACATGCC TAGTTACTAT GCTCCATCGA TTGGATTTCC ATATTCTCTT 60 61 GGGGAAGCAG CATGGTCCAC GGCTGGAGAC CAACCTATGC CATACCTGAC AACCTATGGA 120 121 CAAATGAGTA ATGGAGAGCA TCATTATATA CCAGATGGTG TGTTTAGTCA GCCTGGGGCA 180 181 TTAGGAAATA CCCCTCCATT TCTTGGTCAA CATGGATTTA ACTTTTTTCC TGGTAATGCT 240 241 GATTTCTCTA CATGGGGGAC AAGTGGATCT CAGGGACAAT CAACACAAAG TTCTGCTTAT 300 301 AGTAGCAGTT ACGGCTATCC ACCTAGTTCT CTTGGGAGAG CTATTACTGA TGGACAGGCT 360 361 GGATTTGGCA ATGATACTTT GAGTAAGGTG CCTGGCATTA GCAGTATTGA GCAAGGCATG 420 421 ACTGGACTGA AAATTGGTGG TGACCTGACA GCTGCAGTGA CAAAAACTGT AGGAACAGCT 480 481 TTGAGCAGCA GTGGTATGAC TAGCATTGCA ACCAATAGTG TGCCCCCAGT TAGCAGTGCA 540 541 GCGCCTAAAC CGACCTCCTG GGCTGCCATT GCCAGAAAGC CTGCCAAACC TCAACCGAAA 600 601 CTTAAACCCA AGGGCAATGT GGGAATTGGG GGTTCTGCTG TGCCACCACC TCCTATAAAA 660 661 CACAACATGA ATATTGGAAC TTGGGATGAA AAGGGGTCAG TGGTAAAGGC TCCACCAACC 720 721 CAACCAGTTC TGCCTCCTCA AACTATAATC CAGCAGCCTC AGCCATTAAT TCAGCCACCA 780 781 CCATTGGTGC AAAGCCAACT GCCTCAACAG CAGCCTCAGC CACCACAACC ACAGCAGCAA 840 841 CAAGGACCTC AGCCCCAGGC CCAGCCTCAT CAAGTGCAGC CTCAACAGCA GCAGCTGCAG 900 901 AATCGCTGGG TAGCTCCTCG GAACAGGGGG GCTGGCTTCA ACCAGAACAA TGGAGCGGGC 960 961 GGTGAAAACT TTGGTTTAGG TGTTGTTCCT GTCAGCGCTT CGCCTTCAAG TGTAGAAGTG 1020 1021 CATCCAGTGC TGGAAAAGCT AAAGGCCATA AACAACTATA ATCCCAAAGA CTTTGACTGG 1080 1081 AACCTGAAGA ACGGACGTGT GTTTATAATC AAAAGCTATT CTGAGGATGA CATACACCGT 1140 1141 TCCATTAAGT ACTCTATCTG GTGTAGTACT GAGCATGGTA ATAAGCGTTT GGATGCAGCT 1200 1201 TACCGTTCCC TGAATGGGAA AGGCCCACTC TATTTGCTCT TCAGTGTGAA TGGCAGTGGA 1260 1261 CATTTTTGTG GAGTGGCTGA GATGAAGTCT GTTGTGGACT ATAATGCATA TGCTGGTGTC 1320 1321 TGGTCTCAGG ATAAGTGGAA GGGCAAATTT GAAGTTAAAT GGATCTTTGT CAAAGATGTT 1380 1381 CCCAATAACC AATTGCGGCA TATTCGCTTA GAAAATAATG ACAACAAACC AGTTACCAAT 1440 1441 TCAAGGGACA CTCAAGAGGT ACCCCTAGAA AAAGCTAAGC AAGTGCTTAA AATAATTGCT 1500 1501 ACTTTCAAGC ATACCACCTC AATCTTTGAT GACTTTGCAC ATTATGAAAA GCGTCAAGAA 1560 1561 GAGGAGGAAG CCATGCGTAG GGAGAGAAAT AGAAACAAAC AATAA 1605 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Otg-0685 | Otolemur garnettii | 100.0 | 1e-117 | 367 |
| LLPS-Orc-2506 | Oryctolagus cuniculus | 100.0 | 3e-117 | 365 |
| LLPS-Rhb-4416 | Rhinopithecus bieti | 100.0 | 3e-117 | 365 |
| LLPS-Pat-2663 | Pan troglodytes | 100.0 | 3e-117 | 365 |
| LLPS-Urm-1053 | Ursus maritimus | 100.0 | 4e-117 | 365 |
| LLPS-Hos-2791 | Homo sapiens | 100.0 | 3e-117 | 365 |
| LLPS-Man-4517 | Macaca nemestrina | 100.0 | 3e-117 | 365 |
| LLPS-Ict-0885 | Ictidomys tridecemlineatus | 100.0 | 4e-117 | 365 |
| LLPS-Nol-3415 | Nomascus leucogenys | 100.0 | 4e-117 | 365 |
| LLPS-Poa-0855 | Pongo abelii | 100.0 | 1e-19 | 96.3 |
| LLPS-Caf-1507 | Canis familiaris | 100.0 | 5e-117 | 365 |
| LLPS-Eqc-4385 | Equus caballus | 100.0 | 4e-117 | 365 |
| LLPS-Mam-3669 | Macaca mulatta | 100.0 | 3e-117 | 365 |
| LLPS-Gog-4284 | Gorilla gorilla | 100.0 | 3e-117 | 365 |
| LLPS-Maf-1150 | Macaca fascicularis | 100.0 | 3e-117 | 365 |
| LLPS-Chs-4450 | Chlorocebus sabaeus | 100.0 | 2e-117 | 365 |
| LLPS-Cea-4386 | Cercocebus atys | 100.0 | 3e-117 | 365 |
| LLPS-Paa-2990 | Papio anubis | 100.0 | 3e-117 | 365 |
| LLPS-Mal-4159 | Mandrillus leucophaeus | 100.0 | 3e-117 | 365 |
| LLPS-Ova-1420 | Ovis aries | 100.0 | 5e-117 | 365 |
| LLPS-Tut-2327 | Tursiops truncatus | 100.0 | 7e-118 | 367 |
| LLPS-Fec-0461 | Felis catus | 99.61 | 0.0 | 706 |
| LLPS-Pap-3117 | Pan paniscus | 99.58 | 2e-114 | 358 |
| LLPS-Cas-2470 | Carlito syrichta | 99.58 | 2e-117 | 366 |
| LLPS-Cap-1682 | Cavia porcellus | 99.58 | 4e-117 | 365 |
| LLPS-Fud-3050 | Fukomys damarensis | 99.58 | 5e-117 | 365 |
| LLPS-Caj-4457 | Callithrix jacchus | 99.58 | 2e-116 | 363 |
| LLPS-Aon-4113 | Aotus nancymaae | 99.58 | 2e-116 | 363 |
| LLPS-Mup-1219 | Mustela putorius furo | 99.58 | 1e-116 | 363 |
| LLPS-Aim-1752 | Ailuropoda melanoleuca | 99.58 | 4e-117 | 365 |
| LLPS-Bot-3016 | Bos taurus | 99.58 | 5e-116 | 363 |
| LLPS-Myl-3359 | Myotis lucifugus | 99.53 | 5e-119 | 370 |
| LLPS-Pes-2947 | Pelodiscus sinensis | 99.42 | 7e-117 | 364 |
| LLPS-Mum-4416 | Mus musculus | 99.16 | 9e-118 | 367 |
| LLPS-Dio-2710 | Dipodomys ordii | 99.16 | 6e-116 | 362 |
| LLPS-Mea-0829 | Mesocricetus auratus | 98.98 | 3e-36 | 143 |
| LLPS-Ran-1816 | Rattus norvegicus | 98.73 | 4e-117 | 365 |
| LLPS-Loa-0700 | Loxodonta africana | 98.64 | 0.0 | 706 |
| LLPS-Mod-3784 | Monodelphis domestica | 97.67 | 2e-118 | 368 |
| LLPS-Fia-3581 | Ficedula albicollis | 96.74 | 4e-118 | 367 |
| LLPS-Meg-1669 | Meleagris gallopavo | 96.74 | 6e-118 | 368 |
| LLPS-Anp-1621 | Anas platyrhynchos | 96.74 | 4e-118 | 367 |
| LLPS-Gaga-1082 | Gallus gallus | 96.74 | 9e-118 | 367 |
| LLPS-Tag-3212 | Taeniopygia guttata | 96.74 | 4e-118 | 367 |
| LLPS-Sah-2468 | Sarcophilus harrisii | 96.74 | 5e-117 | 365 |
| LLPS-Dar-4146 | Danio rerio | 96.51 | 2e-113 | 356 |
| LLPS-Xet-2814 | Xenopus tropicalis | 95.35 | 1e-117 | 366 |
| LLPS-Anc-1090 | Anolis carolinensis | 95.35 | 4e-118 | 367 |
| LLPS-Pof-2648 | Poecilia formosa | 92.67 | 2e-112 | 353 |
| LLPS-Scm-0769 | Scophthalmus maximus | 92.67 | 2e-112 | 353 |
| LLPS-Xim-2138 | Xiphophorus maculatus | 92.67 | 2e-112 | 353 |
| LLPS-Tar-2666 | Takifugu rubripes | 92.67 | 6e-112 | 352 |
| LLPS-Ten-2110 | Tetraodon nigroviridis | 91.62 | 5e-111 | 349 |
| LLPS-Ora-1445 | Ornithorhynchus anatinus | 90.7 | 4e-107 | 338 |
| LLPS-Ere-0039 | Erinaceus europaeus | 88.95 | 1e-105 | 333 |
| LLPS-Lac-2080 | Latimeria chalumnae | 88.37 | 6e-106 | 336 |
| LLPS-Asm-3684 | Astyanax mexicanus | 88.37 | 5e-106 | 337 |
| LLPS-Scf-3104 | Scleropages formosus | 88.37 | 9e-106 | 337 |
| LLPS-Orn-1067 | Oreochromis niloticus | 87.79 | 4e-105 | 334 |
| LLPS-Icp-0525 | Ictalurus punctatus | 87.79 | 2e-104 | 333 |
| LLPS-Orl-3918 | Oryzias latipes | 87.79 | 2e-104 | 333 |
| LLPS-Leo-2753 | Lepisosteus oculatus | 87.79 | 5e-105 | 333 |
| LLPS-Gaa-2229 | Gasterosteus aculeatus | 87.21 | 1e-104 | 333 |
| LLPS-Cii-1680 | Ciona intestinalis | 75.0 | 3e-89 | 292 |
| LLPS-Cis-1127 | Ciona savignyi | 74.42 | 3e-88 | 290 |
| LLPS-Drm-0190 | Drosophila melanogaster | 66.09 | 8e-71 | 246 |
| LLPS-Sem-1795 | Selaginella moellendorffii | 59.87 | 4e-60 | 202 |
| LLPS-Orbr-2376 | Oryza brachyantha | 59.64 | 9e-57 | 206 |
| LLPS-Nia-2251 | Nicotiana attenuata | 58.79 | 3e-54 | 199 |
| LLPS-Amt-0416 | Amborella trichopoda | 58.43 | 1e-57 | 209 |
| LLPS-Viv-1523 | Vitis vinifera | 58.43 | 1e-55 | 204 |
| LLPS-Pot-0726 | Populus trichocarpa | 57.83 | 1e-54 | 199 |
| LLPS-Sei-2477 | Setaria italica | 57.83 | 1e-56 | 205 |
| LLPS-Vir-2198 | Vigna radiata | 57.83 | 5e-56 | 202 |
| LLPS-Brn-1657 | Brassica napus | 57.74 | 1e-56 | 205 |
| LLPS-Arl-2728 | Arabidopsis lyrata | 57.49 | 8e-54 | 195 |
| LLPS-Sob-2429 | Sorghum bicolor | 57.23 | 1e-56 | 205 |
| LLPS-Ors-0085 | Oryza sativa | 57.23 | 4e-55 | 201 |
| LLPS-Org-0630 | Oryza glaberrima | 57.23 | 3e-55 | 201 |
| LLPS-Zem-1363 | Zea mays | 57.23 | 3e-56 | 204 |
| LLPS-Orm-2050 | Oryza meridionalis | 57.23 | 5e-55 | 201 |
| LLPS-Orr-2253 | Oryza rufipogon | 57.23 | 3e-55 | 201 |
| LLPS-Orni-1115 | Oryza nivara | 57.23 | 8e-55 | 201 |
| LLPS-Mua-1597 | Musa acuminata | 57.23 | 3e-55 | 202 |
| LLPS-Orb-1940 | Oryza barthii | 57.23 | 3e-55 | 201 |
| LLPS-Ori-1799 | Oryza indica | 57.23 | 6e-55 | 201 |
| LLPS-Met-0349 | Medicago truncatula | 57.23 | 5e-54 | 199 |
| LLPS-Brd-2434 | Brachypodium distachyon | 57.23 | 8e-56 | 202 |
| LLPS-Orgl-2287 | Oryza glumaepatula | 57.23 | 3e-55 | 201 |
| LLPS-Lep-1818 | Leersia perrieri | 57.23 | 6e-55 | 199 |
| LLPS-Brr-2506 | Brassica rapa | 57.14 | 1e-56 | 201 |
| LLPS-Bro-1512 | Brassica oleracea | 57.14 | 7e-56 | 203 |
| LLPS-Mel-0946 | Melampsora laricipopulina | 57.06 | 1e-65 | 218 |
| LLPS-Art-1970 | Arabidopsis thaliana | 56.89 | 2e-53 | 194 |
| LLPS-Crn-1452 | Cryptococcus neoformans | 56.65 | 6e-57 | 209 |
| LLPS-Tru-2004 | Triticum urartu | 56.63 | 5e-54 | 198 |
| LLPS-Dac-1708 | Daucus carota | 56.63 | 3e-53 | 197 |
| LLPS-Tra-0547 | Triticum aestivum | 56.63 | 5e-54 | 199 |
| LLPS-Mae-0588 | Manihot esculenta | 56.57 | 6e-57 | 206 |
| LLPS-Hov-0963 | Hordeum vulgare | 56.55 | 1e-54 | 200 |
| LLPS-Gor-1211 | Gossypium raimondii | 56.21 | 5e-54 | 198 |
| LLPS-Thc-1790 | Theobroma cacao | 56.21 | 6e-54 | 198 |
| LLPS-Put-0964 | Puccinia triticina | 56.07 | 2e-62 | 227 |
| LLPS-Phv-1100 | Phaseolus vulgaris | 56.02 | 6e-53 | 196 |
| LLPS-Coc-1737 | Corchorus capsularis | 55.62 | 3e-53 | 196 |
| LLPS-Pug-1074 | Puccinia graminis | 55.49 | 7e-61 | 223 |
| LLPS-Spr-0275 | Sporisorium reilianum | 55.42 | 4e-56 | 207 |
| LLPS-Orp-2191 | Oryza punctata | 55.36 | 3e-53 | 195 |
| LLPS-Via-0528 | Vigna angularis | 55.36 | 4e-53 | 197 |
| LLPS-Miv-1139 | Microbotryum violaceum | 55.29 | 1e-58 | 216 |
| LLPS-Usm-0883 | Ustilago maydis | 55.09 | 3e-55 | 205 |
| LLPS-Cus-1631 | Cucumis sativus | 54.07 | 8e-55 | 200 |