LLPS-Sol-2396
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Ensembl Gene: | Solyc05g005865.1 |
| Ensembl Protein: | Solyc05g005865.1.1 |
| Organism: | Solanum lycopersicum |
| Taxa ID: | 4081 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MSSNLGKIDV EVEVKSPVDK FWNGIRDSIN LFPKASPNEY KSIEVVEGDG KSVGSVLLIK 60 61 YTEGFPLVTF SKEKIESIDE ANKTLVYSVI DGETLKYYKS FKGTLTVIPK GNGSLVKWCC 120 121 EFERANDEIP EPQIIKEFAV KNFKNLDAYL IGA 153 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTCATCCA ATTTAGGAAA AATTGATGTT GAAGTTGAGG TGAAAAGTCC AGTTGACAAA 60 61 TTTTGGAATG GCATTAGGGA CTCAATAAAT TTGTTCCCCA AGGCTTCACC TAATGAATAC 120 121 AAGAGCATTG AAGTTGTTGA AGGTGATGGC AAGTCTGTTG GTTCTGTTCT ATTGATCAAA 180 181 TATACTGAAG GGTTTCCATT GGTGACATTC TCAAAAGAGA AAATAGAGTC AATTGATGAG 240 241 GCAAATAAAA CATTGGTTTA TTCAGTTATT GATGGTGAAA CCTTGAAATA CTACAAGAGT 300 301 TTCAAAGGCA CCCTAACTGT GATTCCAAAG GGAAATGGAA GTTTGGTTAA GTGGTGTTGT 360 361 GAATTTGAAA GGGCAAATGA TGAAATTCCT GAGCCACAAA TCATTAAAGA ATTTGCTGTC 420 421 AAGAATTTCA AGAATCTTGA TGCTTATCTC ATTGGGGCAT AA 462 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sot-1348 | Solanum tuberosum | 94.77 | 7e-101 | 293 |
| LLPS-Nia-1479 | Nicotiana attenuata | 83.11 | 2e-86 | 256 |
| LLPS-Prp-1487 | Prunus persica | 63.16 | 1e-67 | 209 |
| LLPS-Cus-0075 | Cucumis sativus | 61.59 | 4e-59 | 187 |
| LLPS-Gor-0669 | Gossypium raimondii | 60.53 | 5e-61 | 193 |
| LLPS-Viv-2101 | Vitis vinifera | 60.42 | 3e-57 | 182 |
| LLPS-Arl-0978 | Arabidopsis lyrata | 59.59 | 2e-58 | 186 |
| LLPS-Art-0991 | Arabidopsis thaliana | 59.59 | 2e-58 | 185 |
| LLPS-Thc-0062 | Theobroma cacao | 58.62 | 1e-57 | 183 |
| LLPS-Mae-2517 | Manihot esculenta | 57.89 | 2e-57 | 182 |
| LLPS-Pot-0404 | Populus trichocarpa | 57.53 | 2e-57 | 182 |
| LLPS-Mua-2151 | Musa acuminata | 57.04 | 4e-55 | 177 |
| LLPS-Hea-2026 | Helianthus annuus | 56.95 | 1e-60 | 191 |
| LLPS-Brn-0357 | Brassica napus | 56.88 | 8e-40 | 136 |
| LLPS-Brr-2816 | Brassica rapa | 56.88 | 8e-40 | 136 |
| LLPS-Bro-1885 | Brassica oleracea | 56.85 | 3e-56 | 180 |
| LLPS-Coc-2368 | Corchorus capsularis | 55.86 | 3e-55 | 177 |
| LLPS-Lep-1708 | Leersia perrieri | 55.03 | 5e-56 | 179 |
| LLPS-Hov-1918 | Hordeum vulgare | 55.0 | 1e-38 | 136 |
| LLPS-Tra-2068 | Triticum aestivum | 54.05 | 6e-53 | 171 |
| LLPS-Tru-2075 | Triticum urartu | 54.05 | 6e-53 | 171 |
| LLPS-Zem-2616 | Zea mays | 54.0 | 3e-54 | 174 |
| LLPS-Orgl-1566 | Oryza glumaepatula | 52.29 | 1e-51 | 168 |
| LLPS-Ors-1617 | Oryza sativa | 52.29 | 1e-51 | 168 |
| LLPS-Orr-0700 | Oryza rufipogon | 52.29 | 1e-51 | 168 |
| LLPS-Orbr-1936 | Oryza brachyantha | 52.03 | 4e-52 | 169 |
| LLPS-Brd-1429 | Brachypodium distachyon | 51.97 | 3e-51 | 167 |
| LLPS-Sei-1778 | Setaria italica | 51.68 | 3e-51 | 167 |
| LLPS-Orni-2313 | Oryza nivara | 51.63 | 6e-51 | 166 |
| LLPS-Ori-2471 | Oryza indica | 51.63 | 6e-51 | 166 |
| LLPS-Orb-0384 | Oryza barthii | 51.63 | 6e-51 | 166 |
| LLPS-Sob-1638 | Sorghum bicolor | 51.63 | 1e-48 | 160 |
| LLPS-Org-0665 | Oryza glaberrima | 51.63 | 6e-51 | 166 |
| LLPS-Glm-2903 | Glycine max | 51.35 | 1e-50 | 166 |
| LLPS-Amt-1645 | Amborella trichopoda | 51.33 | 1e-49 | 163 |
| LLPS-Met-1801 | Medicago truncatula | 51.03 | 1e-50 | 166 |
| LLPS-Dac-2105 | Daucus carota | 50.65 | 6e-50 | 164 |
| LLPS-Orp-1295 | Oryza punctata | 49.38 | 4e-52 | 169 |
| LLPS-Sem-1502 | Selaginella moellendorffii | 35.81 | 2e-23 | 95.5 |
| LLPS-Php-1997 | Physcomitrella patens | 30.0 | 1e-08 | 54.3 |