LLPS-Sol-2264
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Ensembl Gene: | Solyc08g083210.3 |
| Ensembl Protein: | Solyc08g083210.3.1 |
| Organism: | Solanum lycopersicum |
| Taxa ID: | 4081 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAHAHANKAS LNMLMLCFTL LNLSHNFAFA FTSQDYSNAL DKSIRFFEGQ RSGKLPANQR 60 61 LKWRADSGLS DGSGYHVDLV GGYYDAGDNV KFGLPMAFTT TLLAWSVIEF GSSMHSQLNN 120 121 AKAAIRWSSD YLLKAATASP DTLYVQVGDP NQDHRCWERP EDMDTPRNVY KVSPQNPGSD 180 181 VAAETAAALA AASIVFKDSD PSYSSSLLRT AQKVFAFADK YRGSYSDSLS SVVCPFYCSY 240 241 SGYNDELLWG ASWLHRASQD SSYLAYIQSN GQTMGANDDD YSFSWDDKRP GTKIILSKDF 300 301 LEKSSQEFQA YKVHSDNYIC SLIPGSPSFQ AQYTPGGLLY KGSGSNLQYV TSSSFLLLTY 360 361 AKYLRSNGGD VSCGSSRFPA ERLVELAKKQ VDYILGDNPA KISYMVGFGD KYPLRVHHRG 420 421 SSLPSVHAHP GHIGCNDGFQ SLNSGSPNPN VLIGAIVGGP DSRDNFEDDR NNYQQSEPAT 480 481 YINAPLVGAL AFLSAPN 497 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTCATG CTCATGCTAA TAAGGCTTCT TTAAACATGC TCATGCTATG CTTCACCTTA 60 61 CTTAATCTCT CTCATAATTT TGCCTTTGCC TTCACTTCTC AAGACTACTC TAATGCTCTT 120 121 GACAAATCCA TTCGTTTCTT TGAGGGACAG AGATCCGGAA AATTGCCTGC GAATCAACGC 180 181 CTTAAGTGGA GGGCTGATTC TGGCTTATCT GATGGTTCCG GTTACCATGT TGATCTAGTA 240 241 GGAGGATATT ATGATGCAGG GGACAATGTT AAGTTTGGAT TGCCAATGGC TTTCACCACA 300 301 ACTCTACTAG CATGGAGTGT CATCGAATTT GGGAGCTCCA TGCATAGCCA ACTTAACAAT 360 361 GCAAAAGCAG CCATTCGTTG GAGTAGCGAT TATCTTCTTA AAGCAGCCAC AGCTAGCCCC 420 421 GACACGTTAT ACGTTCAAGT AGGAGACCCC AACCAAGATC ACAGGTGTTG GGAGAGACCT 480 481 GAGGACATGG ATACGCCTCG CAACGTGTAC AAAGTGTCCC CTCAAAATCC AGGTTCTGAT 540 541 GTTGCTGCTG AGACTGCTGC TGCATTGGCT GCTGCCTCTA TTGTGTTCAA AGATTCTGAC 600 601 CCTTCTTATT CCTCGTCATT ATTGCGTACT GCACAAAAGG TGTTTGCTTT TGCAGACAAG 660 661 TATAGAGGTT CCTATAGTGA CAGTCTCAGT TCAGTGGTCT GCCCATTTTA CTGCTCTTAT 720 721 TCTGGTTACA ATGATGAACT TCTATGGGGA GCATCATGGC TTCATAGAGC TTCACAAGAC 780 781 TCTTCTTATC TTGCTTATAT CCAATCCAAT GGTCAAACTA TGGGTGCTAA TGATGATGAC 840 841 TACTCCTTCA GTTGGGATGA CAAGAGACCT GGAACCAAAA TTATACTATC AAAGGACTTT 900 901 TTGGAGAAGA GTAGTCAAGA ATTCCAAGCA TACAAAGTTC ACTCAGACAA CTATATCTGC 960 961 TCATTGATTC CAGGCTCACC TAGCTTTCAA GCTCAGTATA CCCCAGGAGG ACTTTTATAC 1020 1021 AAAGGAAGTG GAAGTAATCT CCAATACGTG ACATCTTCAT CGTTTCTCCT ATTAACCTAT 1080 1081 GCCAAATACT TGAGGTCAAA TGGAGGGGAT GTGTCATGTG GGAGTTCAAG ATTTCCTGCA 1140 1141 GAGAGGCTCG TTGAGCTTGC AAAGAAACAA GTGGACTACA TATTAGGAGA TAATCCAGCA 1200 1201 AAAATATCGT ACATGGTTGG TTTTGGAGAC AAGTATCCAC TTCGCGTGCA CCATAGAGGT 1260 1261 TCATCTCTAC CATCAGTGCA TGCACATCCT GGTCACATTG GCTGCAATGA TGGATTCCAG 1320 1321 TCTTTGAATT CGGGGTCGCC GAATCCAAAC GTTCTCATTG GAGCCATCGT GGGTGGTCCT 1380 1381 GATAGTAGAG ATAACTTTGA AGATGACAGG AACAATTATC AGCAATCGGA GCCTGCTACA 1440 1441 TACATTAATG CTCCACTAGT TGGGGCCCTT GCTTTCTTAT CCGCACCAAA TTAA 1494 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sot-2242 | Solanum tuberosum | 95.78 | 0.0 | 951 |
| LLPS-Coc-0133 | Corchorus capsularis | 78.41 | 0.0 | 778 |
| LLPS-Orbr-2341 | Oryza brachyantha | 66.18 | 0.0 | 623 |
| LLPS-Arl-1533 | Arabidopsis lyrata | 66.16 | 0.0 | 630 |
| LLPS-Glm-0730 | Glycine max | 65.95 | 0.0 | 621 |
| LLPS-Via-0360 | Vigna angularis | 65.9 | 0.0 | 585 |
| LLPS-Bro-0888 | Brassica oleracea | 65.8 | 0.0 | 620 |
| LLPS-Brr-0894 | Brassica rapa | 65.47 | 0.0 | 629 |
| LLPS-Art-0590 | Arabidopsis thaliana | 65.37 | 0.0 | 607 |
| LLPS-Brn-3302 | Brassica napus | 65.04 | 0.0 | 623 |
| LLPS-Orb-2319 | Oryza barthii | 64.93 | 0.0 | 632 |
| LLPS-Hea-2580 | Helianthus annuus | 64.5 | 0.0 | 623 |
| LLPS-Nia-0646 | Nicotiana attenuata | 64.29 | 0.0 | 629 |
| LLPS-Tra-0644 | Triticum aestivum | 64.21 | 0.0 | 608 |
| LLPS-Phv-2508 | Phaseolus vulgaris | 63.26 | 0.0 | 601 |
| LLPS-Pot-2461 | Populus trichocarpa | 63.18 | 0.0 | 628 |
| LLPS-Amt-1802 | Amborella trichopoda | 61.47 | 0.0 | 577 |
| LLPS-Dac-2222 | Daucus carota | 61.37 | 0.0 | 599 |
| LLPS-Orgl-2221 | Oryza glumaepatula | 60.81 | 0.0 | 566 |
| LLPS-Vir-1774 | Vigna radiata | 60.65 | 0.0 | 552 |
| LLPS-Org-2241 | Oryza glaberrima | 60.6 | 0.0 | 563 |
| LLPS-Orr-1746 | Oryza rufipogon | 60.6 | 0.0 | 564 |
| LLPS-Ors-0346 | Oryza sativa | 60.6 | 0.0 | 564 |
| LLPS-Orp-1978 | Oryza punctata | 60.6 | 0.0 | 562 |
| LLPS-Orni-1507 | Oryza nivara | 60.6 | 0.0 | 563 |
| LLPS-Ori-1692 | Oryza indica | 60.6 | 0.0 | 563 |
| LLPS-Orm-2078 | Oryza meridionalis | 60.55 | 0.0 | 558 |
| LLPS-Lep-1974 | Leersia perrieri | 60.55 | 0.0 | 558 |
| LLPS-Prp-1764 | Prunus persica | 60.39 | 0.0 | 560 |
| LLPS-Gor-0261 | Gossypium raimondii | 60.3 | 0.0 | 554 |
| LLPS-Mua-1801 | Musa acuminata | 60.17 | 0.0 | 545 |
| LLPS-Thc-0063 | Theobroma cacao | 60.17 | 0.0 | 560 |
| LLPS-Sob-2121 | Sorghum bicolor | 60.04 | 0.0 | 566 |
| LLPS-Sei-1504 | Setaria italica | 59.87 | 0.0 | 551 |
| LLPS-Hov-1785 | Hordeum vulgare | 59.74 | 0.0 | 553 |
| LLPS-Viv-2188 | Vitis vinifera | 59.65 | 0.0 | 563 |
| LLPS-Cus-1953 | Cucumis sativus | 59.35 | 0.0 | 543 |
| LLPS-Brd-1389 | Brachypodium distachyon | 59.28 | 0.0 | 554 |
| LLPS-Mae-2374 | Manihot esculenta | 58.87 | 0.0 | 549 |
| LLPS-Met-2522 | Medicago truncatula | 58.84 | 0.0 | 543 |
| LLPS-Zem-1708 | Zea mays | 58.67 | 0.0 | 537 |
| LLPS-Sem-1702 | Selaginella moellendorffii | 56.38 | 7e-176 | 510 |
| LLPS-Php-2342 | Physcomitrella patens | 55.91 | 0.0 | 524 |
| LLPS-Tru-0921 | Triticum urartu | 54.47 | 4e-121 | 367 |