LLPS-Sol-2012
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Ensembl Gene: | Solyc01g091380.3 |
| Ensembl Protein: | Solyc01g091380.3.1 |
| Organism: | Solanum lycopersicum |
| Taxa ID: | 4081 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| PcG body | Predicted from orthologs | (View) |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MLAGCYFEEY KLLAYGLSVV KVLPCELHPT SAQSVVTWSQ ASVRRGATLD ASFLNLDASR 60 61 GSLEGFVREK AQQVETTSVS HFVSQSEKPL HMETTCGSLL SEMQRIWDEM GEPDIERDKM 120 121 LFELQQECLE AYRRKVNQAS RCRAQLRQTV ADSEAEIAKI CAALGEQSSY ARQISRSLKE 180 181 ELEAIKPKLE EMKRRKGERM NQFAAVVDQI QTFSKELCLH FQENAQMSVI DENDLSVRRL 240 241 EEMQNYLLAL QKEKSDRLKL LVDHLTTINS LCVVLGVDYK QTISEVDPTL EDSRVLKNIS 300 301 KDMIFKLSAM INRLEELKKQ RLLRLQDLAT TLIQLWSLMD TPLEEQQKFY DFTRHIAASE 360 361 NEINEPNVLS ADSLQHAEAE VSRLQAMKST KMKEVLLRKR LELEEICRKA HLVIETQNSV 420 421 DFSVEAIESG TIDPSYLLEQ IEVQIAKVKE ETFSRREILE KLEKWLAACD EECWLEEYNR 480 481 DENRYHGGKG THRNLKRAEK ARVLVNKIPA MVETLRLRTS AWQKERGHEF LYDGVAVLYM 540 541 LEQYCVLKQE RELERQRQRD QKKLQGQLMV EQEALFGSIP SPSKSAKKNF RPSMGGLTNK 600 601 RLSLGGSMLQ IPYAGKPAPS SRLSSSLKQQ TPQSGRRDSI LAPRKNQGNL YPPCTPRTEL 660 661 VQTRKAPLNP PRTKSAQIRK GPLNPPKNAT TQTRKPLSPL SSLLSSNAST INIQNQTLKS 720 721 GVVQEALYLN RTPVMTPTKI TTAEGRLKET VSFNKTPIIT PTKIASAVEG SITPKTLPIP 780 781 MPATPSSVST AMQTAMTPSS RHVSACADNI EYSFEERRTG YVPLPHANVI TKCLI 835 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGTTGGCAG GCTGCTATTT TGAAGAATAC AAGCTTTTGG CATATGGATT GAGTGTTGTA 60 61 AAGGTTTTGC CATGTGAACT TCATCCCACT TCAGCTCAGT CAGTGGTCAC CTGGTCTCAA 120 121 GCGTCCGTGA GGAGAGGAGC AACACTTGAT GCCTCTTTTC TCAACTTGGA TGCCTCGCGT 180 181 GGTAGTTTGG AAGGCTTTGT TCGAGAAAAA GCACAACAAG TAGAGACGAC CTCTGTGAGC 240 241 CATTTTGTGA GCCAAAGTGA GAAGCCTTTG CATATGGAAA CAACTTGTGG CTCTCTTCTC 300 301 TCTGAGATGC AGAGAATATG GGATGAGATG GGAGAGCCTG ATATCGAAAG GGATAAGATG 360 361 CTTTTCGAGC TACAGCAAGA GTGTCTGGAG GCATATAGAA GAAAAGTGAA TCAGGCAAGT 420 421 CGTTGCCGGG CTCAACTGCG GCAAACTGTT GCCGACTCTG AAGCAGAAAT TGCAAAGATA 480 481 TGTGCAGCAC TAGGAGAACA ATCATCATAT GCTAGGCAGA TTTCCAGAAG TTTGAAGGAA 540 541 GAACTTGAGG CCATTAAGCC TAAGTTAGAA GAGATGAAGA GGAGAAAAGG AGAGAGGATG 600 601 AACCAGTTTG CGGCTGTTGT TGATCAGATA CAGACTTTCT CGAAAGAGCT CTGTTTACAC 660 661 TTCCAAGAGA ATGCTCAAAT GAGTGTAATT GATGAGAATG ATTTGTCTGT CAGAAGACTA 720 721 GAAGAAATGC AGAATTATTT GCTTGCTTTG CAAAAAGAGA AGAGTGACCG CCTGAAGCTG 780 781 CTGGTTGACC ACTTGACAAC TATCAATTCA TTATGTGTGG TCCTTGGGGT TGATTACAAA 840 841 CAAACTATTT CTGAGGTTGA TCCAACCCTA GAAGATTCTC GTGTCTTGAA AAACATAAGC 900 901 AAAGATATGA TCTTTAAGCT TTCTGCTATG ATCAACAGAT TGGAAGAGCT CAAGAAACAA 960 961 AGATTGCTTA GGCTTCAAGA TCTTGCAACT ACCCTGATTC AGCTGTGGAG CTTGATGGAT 1020 1021 ACACCACTAG AGGAGCAACA GAAATTTTAT GATTTCACCA GGCACATAGC GGCTTCAGAA 1080 1081 AATGAAATAA ATGAGCCTAA TGTTTTGTCT GCCGACAGTC TTCAACATGC AGAGGCAGAA 1140 1141 GTGTCAAGAT TGCAGGCAAT GAAATCAACA AAAATGAAAG AGGTTCTTCT GAGAAAGAGG 1200 1201 CTGGAGTTGG AGGAGATCTG TAGGAAAGCA CATTTGGTTA TTGAAACACA AAATTCAGTT 1260 1261 GACTTTTCTG TTGAAGCTAT AGAATCTGGC ACAATTGATC CTTCATATCT GCTTGAGCAA 1320 1321 ATCGAGGTCC AGATTGCCAA GGTTAAAGAG GAAACCTTTA GTAGGAGAGA GATTCTTGAA 1380 1381 AAGTTGGAGA AGTGGTTGGC TGCATGTGAT GAGGAGTGTT GGTTGGAGGA ATACAACAGG 1440 1441 GATGAAAATC GTTACCATGG TGGAAAAGGT ACACATCGTA ATTTGAAGCG AGCTGAGAAA 1500 1501 GCTCGAGTTC TTGTCAACAA AATACCTGCT ATGGTGGAGA CATTGAGATT GAGAACTAGC 1560 1561 GCTTGGCAGA AAGAAAGAGG ACATGAATTC TTGTATGATG GTGTAGCCGT TCTTTATATG 1620 1621 CTTGAGCAAT ATTGTGTTCT AAAGCAGGAG AGGGAGCTCG AGCGTCAGAG ACAGAGGGAC 1680 1681 CAGAAGAAGC TTCAGGGACA GTTGATGGTG GAGCAAGAAG CACTTTTTGG TTCAATACCT 1740 1741 AGTCCTTCAA AGAGTGCAAA GAAGAATTTT AGACCATCAA TGGGAGGTTT GACCAATAAA 1800 1801 AGACTATCGC TTGGAGGATC AATGCTTCAA ATCCCATATG CTGGTAAACC TGCACCATCC 1860 1861 TCTCGACTGT CAAGCTCGTT GAAACAGCAA ACTCCCCAAA GTGGCAGAAG AGATAGCATC 1920 1921 TTGGCACCAA GAAAGAACCA AGGAAACCTC TATCCCCCTT GTACACCTAG AACTGAATTA 1980 1981 GTACAGACAA GAAAGGCCCC TTTAAATCCA CCTAGAACTA AATCAGCACA GATAAGGAAG 2040 2041 GGCCCGTTAA ATCCACCTAA AAATGCAACA ACACAGACAA GGAAGCCTCT TTCTCCCTTG 2100 2101 TCGTCATTGT TATCATCAAA TGCTAGTACC ATCAATATTC AGAATCAGAC CCTAAAGAGC 2160 2161 GGGGTGGTCC AGGAAGCACT GTATTTGAAC AGAACACCAG TTATGACTCC AACCAAGATT 2220 2221 ACTACTGCTG AAGGAAGACT CAAGGAAACA GTGTCTTTCA ACAAGACTCC AATTATAACT 2280 2281 CCAACAAAGA TTGCCTCTGC TGTTGAAGGA AGTATTACCC CAAAAACATT GCCCATTCCA 2340 2341 ATGCCAGCAA CTCCTTCATC AGTTTCCACT GCCATGCAGA CTGCAATGAC CCCATCCAGT 2400 2401 CGCCATGTTT CTGCTTGTGC TGATAATATC GAGTACTCAT TCGAGGAGAG AAGAACTGGT 2460 2461 TACGTTCCAT TGCCACATGC CAACGTCATT ACCAAATGCT TGATTTAG 2508 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Mua-1427 | Musa acuminata | 59.21 | 5e-180 | 541 |
| LLPS-Viv-1182 | Vitis vinifera | 58.96 | 1e-168 | 509 |
| LLPS-Glm-2336 | Glycine max | 57.35 | 1e-174 | 529 |
| LLPS-Org-0359 | Oryza glaberrima | 56.44 | 1e-143 | 446 |
| LLPS-Ors-0635 | Oryza sativa | 56.28 | 2e-143 | 448 |
| LLPS-Ori-0559 | Oryza indica | 55.64 | 8e-146 | 452 |
| LLPS-Orr-0564 | Oryza rufipogon | 55.26 | 4e-131 | 429 |
| LLPS-Orni-0261 | Oryza nivara | 55.26 | 2e-131 | 432 |
| LLPS-Tra-0303 | Triticum aestivum | 55.13 | 2e-165 | 504 |
| LLPS-Mae-1931 | Manihot esculenta | 54.93 | 6e-161 | 489 |
| LLPS-Phv-2001 | Phaseolus vulgaris | 54.93 | 4e-158 | 481 |
| LLPS-Orbr-1906 | Oryza brachyantha | 54.55 | 9e-143 | 437 |
| LLPS-Orp-1301 | Oryza punctata | 53.4 | 2e-107 | 363 |
| LLPS-Via-0135 | Vigna angularis | 52.97 | 1e-158 | 484 |
| LLPS-Orm-0820 | Oryza meridionalis | 52.76 | 4e-138 | 447 |
| LLPS-Brd-1737 | Brachypodium distachyon | 52.6 | 9e-146 | 452 |
| LLPS-Orb-0020 | Oryza barthii | 52.13 | 1e-132 | 432 |
| LLPS-Orgl-0844 | Oryza glumaepatula | 52.13 | 1e-132 | 432 |
| LLPS-Hov-0987 | Hordeum vulgare | 51.57 | 2e-161 | 493 |
| LLPS-Lep-1008 | Leersia perrieri | 51.37 | 2e-150 | 481 |
| LLPS-Zem-1984 | Zea mays | 51.08 | 3e-160 | 492 |
| LLPS-Nia-1607 | Nicotiana attenuata | 50.85 | 0.0 | 595 |
| LLPS-Thc-1352 | Theobroma cacao | 50.66 | 0.0 | 565 |
| LLPS-Prp-0611 | Prunus persica | 50.13 | 0.0 | 570 |
| LLPS-Gor-1839 | Gossypium raimondii | 50.07 | 0.0 | 563 |
| LLPS-Cus-2249 | Cucumis sativus | 49.87 | 0.0 | 563 |
| LLPS-Tru-2118 | Triticum urartu | 49.43 | 8e-135 | 429 |
| LLPS-Dac-0667 | Daucus carota | 48.5 | 7e-175 | 530 |
| LLPS-Art-0793 | Arabidopsis thaliana | 48.4 | 2e-141 | 441 |
| LLPS-Coc-1296 | Corchorus capsularis | 48.22 | 4e-141 | 437 |
| LLPS-Pot-2712 | Populus trichocarpa | 48.11 | 1e-176 | 534 |
| LLPS-Vir-1872 | Vigna radiata | 48.11 | 0.0 | 571 |
| LLPS-Hea-1105 | Helianthus annuus | 48.1 | 0.0 | 555 |
| LLPS-Sot-0279 | Solanum tuberosum | 47.65 | 2e-166 | 506 |
| LLPS-Met-1682 | Medicago truncatula | 47.31 | 3e-172 | 522 |
| LLPS-Sem-2114 | Selaginella moellendorffii | 47.17 | 1e-117 | 375 |
| LLPS-Brr-2039 | Brassica rapa | 46.24 | 3e-163 | 499 |
| LLPS-Arl-2841 | Arabidopsis lyrata | 46.12 | 4e-166 | 506 |
| LLPS-Amt-2108 | Amborella trichopoda | 45.53 | 5e-110 | 354 |
| LLPS-Bro-3055 | Brassica oleracea | 45.34 | 9e-128 | 402 |
| LLPS-Php-1340 | Physcomitrella patens | 44.3 | 4e-122 | 389 |
| LLPS-Sob-0415 | Sorghum bicolor | 44.25 | 3e-128 | 403 |
| LLPS-Sei-0132 | Setaria italica | 43.89 | 1e-125 | 397 |
| LLPS-Brn-1608 | Brassica napus | 43.43 | 8e-125 | 396 |
| LLPS-Scf-0475 | Scleropages formosus | 23.98 | 3e-12 | 74.3 |
| LLPS-Aon-0079 | Aotus nancymaae | 23.69 | 7e-07 | 57.0 |
| LLPS-Sah-3357 | Sarcophilus harrisii | 23.64 | 6e-09 | 63.9 |
| LLPS-Leo-3522 | Lepisosteus oculatus | 23.49 | 4e-10 | 67.8 |
| LLPS-Scm-3920 | Scophthalmus maximus | 23.44 | 3e-08 | 61.2 |
| LLPS-Pof-1923 | Poecilia formosa | 23.21 | 8e-10 | 66.6 |
| LLPS-Xim-3661 | Xiphophorus maculatus | 23.0 | 3e-09 | 64.7 |
| LLPS-Orl-1707 | Oryzias latipes | 22.96 | 2e-12 | 75.1 |
| LLPS-Lac-2420 | Latimeria chalumnae | 22.75 | 3e-10 | 68.2 |
| LLPS-Icp-3028 | Ictalurus punctatus | 22.62 | 1e-07 | 59.3 |
| LLPS-Gaa-0184 | Gasterosteus aculeatus | 22.41 | 1e-07 | 59.7 |
| LLPS-Orn-3866 | Oreochromis niloticus | 22.3 | 5e-08 | 60.8 |
| LLPS-Dar-3241 | Danio rerio | 22.22 | 1e-06 | 56.6 |
| LLPS-Otg-4183 | Otolemur garnettii | 21.98 | 2e-06 | 55.5 |