LLPS-Sol-2001
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Ensembl Gene: | Solyc03g117740.3 |
| Ensembl Protein: | Solyc03g117740.3.1 |
| Organism: | Solanum lycopersicum |
| Taxa ID: | 4081 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MKAAAAMVNT VTLSNSTFWH KPISRINQNF KIRASISTSG NMVAPAIIVG GGRVGRALQD 60 61 LGNGDDVLVK RGEPVPIDFV GPILVCTRND DLEAVLEATP KSRWSDLVFF QNGMLEPWFQ 120 121 SKGLGDADQV LAYFAVSKLG EPPTDGKTDT NPEGLTAAYG KWASAVAARL QNGGLSCKVL 180 181 DKEPFQKQML EKLIWICAFM LVGARHPGAT VGAVEKEYRS EVSKLIAELA AAAAAEKGLV 240 241 FEDAMEDRLC AYSRAVAHFP TAVKEFKWRN GWFYSLSEKA IAEGKPDPCP LHTAWLKELK 300 301 IV 302 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGAAGGCAG CAGCAGCAAT GGTGAACACT GTCACTCTCT CTAACTCAAC ATTTTGGCAC 60 61 AAACCAATTT CAAGAATCAA CCAGAATTTT AAAATTAGAG CATCAATTTC CACCTCAGGC 120 121 AACATGGTTG CTCCTGCTAT CATAGTTGGA GGTGGACGTG TGGGAAGAGC TTTACAAGAT 180 181 TTGGGTAATG GAGATGATGT TTTGGTTAAA AGGGGTGAAC CAGTTCCTAT TGATTTTGTA 240 241 GGTCCAATAT TGGTTTGCAC TAGGAATGAT GATCTTGAAG CTGTTCTTGA AGCTACCCCT 300 301 AAATCTCGTT GGAGCGATTT GGTATTTTTC CAGAATGGGA TGCTAGAGCC TTGGTTCCAA 360 361 AGTAAAGGCC TTGGTGATGC AGACCAAGTT TTGGCATATT TTGCTGTATC AAAGCTTGGT 420 421 GAACCCCCAA CTGATGGGAA AACTGATACA AATCCAGAAG GATTGACTGC GGCTTATGGG 480 481 AAATGGGCAT CTGCAGTGGC TGCAAGATTG CAGAATGGAG GACTCTCTTG CAAGGTACTT 540 541 GATAAGGAGC CTTTTCAGAA GCAAATGCTG GAGAAGCTTA TATGGATATG TGCTTTCATG 600 601 CTTGTTGGAG CTCGCCATCC TGGAGCTACA GTAGGAGCAG TTGAAAAAGA GTACCGCTCT 660 661 GAGGTGTCAA AACTAATTGC TGAGCTTGCG GCTGCAGCAG CTGCAGAGAA AGGTCTTGTT 720 721 TTTGAGGATG CCATGGAAGA CAGGCTCTGC GCTTACTCAC GAGCAGTTGC ACACTTTCCA 780 781 ACGGCTGTCA AGGAGTTCAA ATGGAGAAAC GGATGGTTCT ATTCACTCTC TGAGAAGGCA 840 841 ATTGCAGAAG GGAAACCAGA TCCATGCCCA TTGCATACTG CATGGCTTAA AGAACTAAAA 900 901 ATAGTCTAG 909 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sot-0064 | Solanum tuberosum | 96.98 | 0.0 | 572 |
| LLPS-Nia-1954 | Nicotiana attenuata | 91.88 | 0.0 | 552 |
| LLPS-Coc-2200 | Corchorus capsularis | 88.51 | 3e-164 | 467 |
| LLPS-Brr-0409 | Brassica rapa | 88.46 | 2e-166 | 472 |
| LLPS-Pot-2506 | Populus trichocarpa | 87.69 | 7e-165 | 467 |
| LLPS-Amt-1615 | Amborella trichopoda | 87.3 | 2e-113 | 333 |
| LLPS-Mae-1582 | Manihot esculenta | 87.22 | 2e-160 | 457 |
| LLPS-Arl-1061 | Arabidopsis lyrata | 87.21 | 3e-163 | 464 |
| LLPS-Art-1153 | Arabidopsis thaliana | 86.82 | 2e-163 | 465 |
| LLPS-Gor-2690 | Gossypium raimondii | 86.15 | 1e-137 | 399 |
| LLPS-Brn-2179 | Brassica napus | 84.7 | 2e-164 | 467 |
| LLPS-Bro-0135 | Brassica oleracea | 83.21 | 2e-161 | 459 |
| LLPS-Orb-0977 | Oryza barthii | 82.01 | 1e-104 | 310 |
| LLPS-Mua-1385 | Musa acuminata | 81.99 | 2e-157 | 449 |
| LLPS-Prp-1071 | Prunus persica | 81.64 | 1e-173 | 490 |
| LLPS-Ors-2319 | Oryza sativa | 79.91 | 2e-110 | 329 |
| LLPS-Orgl-0299 | Oryza glumaepatula | 79.69 | 6e-136 | 394 |
| LLPS-Orr-2074 | Oryza rufipogon | 79.69 | 6e-136 | 394 |
| LLPS-Orni-1849 | Oryza nivara | 79.31 | 2e-135 | 393 |
| LLPS-Phv-1656 | Phaseolus vulgaris | 78.85 | 7e-150 | 429 |
| LLPS-Viv-1640 | Vitis vinifera | 78.81 | 5e-168 | 476 |
| LLPS-Ori-0509 | Oryza indica | 78.71 | 4e-136 | 394 |
| LLPS-Sob-1738 | Sorghum bicolor | 78.6 | 2e-140 | 406 |
| LLPS-Via-2165 | Vigna angularis | 78.43 | 4e-146 | 419 |
| LLPS-Sei-2278 | Setaria italica | 78.23 | 1e-140 | 406 |
| LLPS-Orp-1496 | Oryza punctata | 78.05 | 7e-13 | 67.4 |
| LLPS-Brd-2100 | Brachypodium distachyon | 78.02 | 9e-137 | 397 |
| LLPS-Lep-1471 | Leersia perrieri | 77.91 | 8e-134 | 390 |
| LLPS-Cus-2386 | Cucumis sativus | 77.36 | 1e-159 | 454 |
| LLPS-Met-2494 | Medicago truncatula | 76.26 | 8e-148 | 424 |
| LLPS-Zem-2405 | Zea mays | 76.25 | 1e-108 | 324 |
| LLPS-Glm-1434 | Glycine max | 75.09 | 8e-155 | 442 |
| LLPS-Hea-1982 | Helianthus annuus | 74.83 | 1e-156 | 448 |
| LLPS-Thc-1506 | Theobroma cacao | 73.68 | 5e-160 | 457 |
| LLPS-Vir-0789 | Vigna radiata | 72.89 | 7e-139 | 401 |
| LLPS-Tra-2117 | Triticum aestivum | 72.6 | 1e-133 | 389 |
| LLPS-Orm-0340 | Oryza meridionalis | 72.01 | 1e-134 | 391 |
| LLPS-Tru-1995 | Triticum urartu | 70.89 | 3e-96 | 290 |
| LLPS-Php-1535 | Physcomitrella patens | 69.14 | 9e-131 | 383 |
| LLPS-Sem-2294 | Selaginella moellendorffii | 68.34 | 3e-119 | 350 |
| LLPS-Chr-1658 | Chlamydomonas reinhardtii | 61.57 | 5e-100 | 301 |
| LLPS-Org-1953 | Oryza glaberrima | 60.24 | 2e-111 | 332 |
| LLPS-Osl-1120 | Ostreococcus lucimarinus | 57.85 | 8e-97 | 293 |
| LLPS-Chc-0383 | Chondrus crispus | 45.42 | 3e-72 | 232 |
| LLPS-Cym-1156 | Cyanidioschyzon merolae | 39.92 | 7e-43 | 155 |
| LLPS-Gas-0678 | Galdieria sulphuraria | 36.96 | 7e-46 | 163 |