LLPS-Sol-1504
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Ensembl Gene: | Solyc05g013720.3 |
| Ensembl Protein: | Solyc05g013720.3.1 |
| Organism: | Solanum lycopersicum |
| Taxa ID: | 4081 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MILKTYIFII FTTLFLHWET SETKSRGDIG QASLPPRGWN SYDSFCWTIT EEEFLQNAEL 60 61 VAQRLKPHGY EYVVVDFLWY RKKTIGAYTD SYGFDVFDEW GRMVPDPGRW PSSQGGKGFS 120 121 QVAGKVHSMG LKFGIHVMRG LSLQAFNANT LILDTTTGKA YEEAGRQWRA QDIGIKERTC 180 181 AWMKNGFMSV NTKLGAGRAF LRSLYQQYAD WGVDFVKLDC VFGDDLDLDE IIVVSEVLNE 240 241 LSRPIIYSLS PGTNAKPIIA KEVSGLVNMY RVTGDDWDTW EDVAAHFNVA RDFTAANLVG 300 301 VKGLKGKSWP DLDMLPLGWL TEAGSNEGPH RYCRLNLDEQ RTQVTLWSMV RSPLIFGGDM 360 361 RKLDASTFSL LTNPTLLEIN WFSSNNMEFH YVKGSLSSSG KHSLSNHTED KEKINVLEKR 420 421 VLALRSCKDV KANGWSTKVL DSVEKVCWEE NSNKRQAPFC LNKREALSAS EGETVYQHQN 480 481 LGRLHLFVTE RTELCFGASS NRKLAANEIS RGSFSRCRSH ANQMWENYNG TLMNSYSGFC 540 541 AIMDFVRASS GGIRSWLATG RRGEIYLAFF NLNNQVTKMS AKLSDITNAI HATSSKCSGR 600 601 EVWSGTNLGA IKDSISMSVN AHGCALFVLN CT 632 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGATCTTGA AAACTTATAT TTTCATCATT TTCACTACTC TTTTTCTTCA CTGGGAAACC 60 61 TCAGAAACTA AATCTCGGGG CGATATTGGA CAAGCCAGCT TGCCACCTAG GGGTTGGAAC 120 121 TCCTATGACT CATTTTGTTG GACCATCACC GAGGAAGAGT TTCTTCAGAA TGCAGAACTT 180 181 GTAGCACAAC GATTAAAACC TCATGGTTAT GAGTATGTTG TCGTGGACTT CCTTTGGTAT 240 241 AGGAAGAAAA CAATAGGTGC TTATACTGAT TCTTATGGTT TTGATGTCTT TGATGAGTGG 300 301 GGAAGGATGG TTCCAGACCC TGGAAGATGG CCATCCTCTC AAGGTGGAAA AGGGTTTTCT 360 361 CAAGTTGCGG GGAAGGTTCA TAGCATGGGA CTGAAATTTG GGATTCATGT AATGAGAGGT 420 421 TTAAGTCTAC AAGCATTCAA TGCTAACACT CTCATACTGG ATACCACTAC GGGCAAAGCT 480 481 TATGAGGAGG CTGGTCGACA ATGGCGTGCA CAAGATATTG GAATTAAGGA GAGGACTTGT 540 541 GCATGGATGA AAAATGGTTT CATGAGTGTG AATACCAAGT TGGGAGCTGG AAGAGCATTC 600 601 CTTAGGTCAC TCTATCAACA ATATGCTGAT TGGGGTGTTG ATTTTGTGAA ACTTGACTGT 660 661 GTATTCGGTG ATGACTTGGA TTTAGATGAG ATAATCGTAG TTTCAGAGGT ATTGAATGAG 720 721 CTTAGCCGAC CTATCATATA TTCCTTGTCC CCTGGAACTA ATGCAAAACC AATCATAGCG 780 781 AAGGAAGTTA GTGGATTGGT CAATATGTAT CGAGTAACTG GGGATGACTG GGATACTTGG 840 841 GAAGATGTCG CTGCTCATTT CAACGTTGCG AGGGACTTCA CTGCTGCTAA CTTAGTAGGA 900 901 GTCAAGGGCC TAAAGGGGAA GTCGTGGCCT GACTTAGATA TGCTACCACT TGGATGGTTA 960 961 ACAGAAGCAG GTTCAAATGA AGGCCCACAC AGATATTGCA GGCTTAATCT GGATGAGCAA 1020 1021 CGTACTCAGG TGACCCTATG GTCCATGGTC AGGTCCCCTC TCATCTTTGG TGGAGATATG 1080 1081 AGAAAGCTTG ATGCTTCTAC ATTCAGTCTT CTTACAAATC CTACTCTGTT GGAGATCAAC 1140 1141 TGGTTTAGCT CTAACAACAT GGAGTTTCAT TACGTGAAAG GCTCCTTAAG TTCATCCGGA 1200 1201 AAACATAGCT TGAGTAACCA TACTGAGGAT AAAGAAAAAA TAAATGTGTT GGAGAAGCGA 1260 1261 GTTTTGGCTC TAAGGAGCTG CAAAGATGTA AAGGCAAATG GCTGGTCTAC TAAAGTTCTT 1320 1321 GACAGTGTAG AGAAAGTGTG CTGGGAAGAG AACTCAAATA AACGCCAGGC ACCTTTTTGT 1380 1381 CTAAACAAGA GAGAAGCACT TTCAGCATCA GAAGGAGAGA CGGTATATCA GCACCAAAAT 1440 1441 CTCGGGAGAC TTCACTTATT CGTAACAGAG AGAACAGAAC TTTGTTTTGG TGCATCTTCA 1500 1501 AATAGAAAGC TTGCAGCTAA CGAGATCAGC AGAGGTTCAT TTTCACGGTG CAGATCTCAT 1560 1561 GCCAACCAGA TGTGGGAGAA CTACAATGGA ACCCTCATGA ATAGTTATTC CGGTTTTTGT 1620 1621 GCTATCATGG ATTTTGTCAG AGCTTCTTCT GGTGGAATCA GGTCCTGGCT TGCAACTGGA 1680 1681 AGGAGAGGAG AGATCTACTT GGCTTTCTTC AATTTGAACA ACCAGGTGAC AAAAATGTCA 1740 1741 GCGAAGCTAT CAGACATAAC GAACGCAATT CATGCTACAA GTTCAAAGTG CTCAGGTAGA 1800 1801 GAAGTGTGGA GTGGCACAAA TCTTGGAGCC ATAAAGGACT CGATATCTAT GTCAGTAAAC 1860 1861 GCTCACGGAT GTGCATTGTT TGTGTTGAAC TGCACATAA 1899 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Sot-2105 | Solanum tuberosum | 93.61 | 0.0 | 1237 |
| LLPS-Nia-1581 | Nicotiana attenuata | 82.29 | 0.0 | 1052 |
| LLPS-Thc-0936 | Theobroma cacao | 64.03 | 0.0 | 801 |
| LLPS-Mae-2105 | Manihot esculenta | 62.64 | 0.0 | 801 |
| LLPS-Gor-0141 | Gossypium raimondii | 62.24 | 0.0 | 807 |
| LLPS-Coc-0991 | Corchorus capsularis | 62.23 | 0.0 | 781 |
| LLPS-Prp-0747 | Prunus persica | 62.11 | 0.0 | 797 |
| LLPS-Brr-1810 | Brassica rapa | 61.71 | 0.0 | 753 |
| LLPS-Viv-2432 | Vitis vinifera | 61.57 | 0.0 | 804 |
| LLPS-Pot-1229 | Populus trichocarpa | 61.16 | 0.0 | 779 |
| LLPS-Bro-0761 | Brassica oleracea | 60.82 | 0.0 | 796 |
| LLPS-Brn-2900 | Brassica napus | 60.82 | 0.0 | 796 |
| LLPS-Phv-1542 | Phaseolus vulgaris | 60.63 | 0.0 | 789 |
| LLPS-Glm-1568 | Glycine max | 60.16 | 0.0 | 786 |
| LLPS-Hea-1285 | Helianthus annuus | 60.03 | 0.0 | 772 |
| LLPS-Met-0600 | Medicago truncatula | 59.25 | 0.0 | 790 |
| LLPS-Art-1397 | Arabidopsis thaliana | 59.18 | 0.0 | 792 |
| LLPS-Dac-1679 | Daucus carota | 59.18 | 0.0 | 738 |
| LLPS-Via-0415 | Vigna angularis | 59.15 | 0.0 | 769 |
| LLPS-Arl-2424 | Arabidopsis lyrata | 58.5 | 0.0 | 787 |
| LLPS-Cus-2422 | Cucumis sativus | 56.81 | 0.0 | 741 |
| LLPS-Brd-2459 | Brachypodium distachyon | 56.67 | 7e-132 | 406 |
| LLPS-Vir-1370 | Vigna radiata | 55.72 | 0.0 | 743 |
| LLPS-Mua-2377 | Musa acuminata | 54.08 | 0.0 | 669 |
| LLPS-Amt-1262 | Amborella trichopoda | 53.91 | 0.0 | 705 |
| LLPS-Sob-1819 | Sorghum bicolor | 53.12 | 0.0 | 675 |
| LLPS-Tra-0949 | Triticum aestivum | 53.09 | 0.0 | 682 |
| LLPS-Sei-1833 | Setaria italica | 53.02 | 0.0 | 664 |
| LLPS-Orp-1558 | Oryza punctata | 52.0 | 0.0 | 669 |
| LLPS-Zem-1706 | Zea mays | 51.84 | 0.0 | 659 |
| LLPS-Lep-0474 | Leersia perrieri | 51.67 | 0.0 | 660 |
| LLPS-Ori-2381 | Oryza indica | 51.66 | 0.0 | 665 |
| LLPS-Ors-0807 | Oryza sativa | 51.5 | 0.0 | 664 |
| LLPS-Orr-1489 | Oryza rufipogon | 51.5 | 0.0 | 664 |
| LLPS-Orni-0276 | Oryza nivara | 51.5 | 0.0 | 664 |
| LLPS-Orb-0741 | Oryza barthii | 51.34 | 0.0 | 661 |
| LLPS-Orgl-0277 | Oryza glumaepatula | 51.34 | 0.0 | 665 |
| LLPS-Org-1882 | Oryza glaberrima | 51.18 | 0.0 | 656 |
| LLPS-Orbr-0788 | Oryza brachyantha | 51.04 | 0.0 | 657 |
| LLPS-Hov-1858 | Hordeum vulgare | 49.21 | 0.0 | 563 |
| LLPS-Sem-1897 | Selaginella moellendorffii | 45.34 | 0.0 | 546 |
| LLPS-Tru-1531 | Triticum urartu | 45.26 | 0.0 | 605 |
| LLPS-Php-2335 | Physcomitrella patens | 39.09 | 4e-155 | 469 |
| LLPS-Anc-1178 | Anolis carolinensis | 27.27 | 6e-14 | 78.2 |
| LLPS-Pes-2915 | Pelodiscus sinensis | 26.68 | 7e-14 | 78.2 |
| LLPS-Ran-2007 | Rattus norvegicus | 26.56 | 3e-19 | 94.4 |
| LLPS-Gaga-2442 | Gallus gallus | 26.49 | 5e-17 | 87.8 |
| LLPS-Mum-4895 | Mus musculus | 26.29 | 3e-18 | 91.7 |
| LLPS-Orm-2123 | Oryza meridionalis | 26.27 | 6e-19 | 93.6 |