LLPS-Sol-1267
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Ensembl Gene: | Solyc01g107130.3 |
| Ensembl Protein: | Solyc01g107130.3.1 |
| Organism: | Solanum lycopersicum |
| Taxa ID: | 4081 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MGVSKTSKAT IFLGFLWLNL FQSVVGRFVV EKNSLRVVSP DDIKGTYDSA IGNFGIPQYG 60 61 GSIPGTVVYP KENRKGCRNF EDSGTSFKSK SGAMPTFVLV DRGDCFFALK VWNAQNAGAA 120 121 AVLVADDVDE RLITMDSPEA DGSSAKYIEN ITIPSALIEK NFAEKLKKAV SAGEMVNVNL 180 181 DWREAVPHPD DRVEYELWTS SNDECGFKCD MLMKYVKDFK GAAQILEKGG YTQFTPHYIT 240 241 WYCPQAFTVS KQCKSQCINH GRYCAPDPEQ DFSSGYEGKD VVVENLRQLC VFKVANETNK 300 301 PWVWWDYVTD FQIRCPMKEK KYNKECADAV IKSLGLDSRK IEKCMGDPNA DEDNPVLKEE 360 361 QDAQASFFIF PKRLKQFNFV QTLRKVEFLC RLVKEQEEMS PSYLLLLSTI DNIEVSAHTY 420 421 SCLQLRTFIL SFLMLLLSGK LEKGAVLKAI CAGFEETTEP AVCLSDDVET NECLDNNGGC 480 481 WKDKAANITA CKDTFRGRVC ECPVVDGVQF KGDGYSSCTG CLGPAEFVED CSLSNYCRPV 540 541 GVKYIILSQE AGSASGRGRC KLNNGGCWHD TRDGHTFSAC VDNEEGKCTC PPGFKGDGVK 600 601 SCEDIDECRE KKACQCPECS CKNTWGSYEC SCSGELLYIR DHDTCISKRA REVKSAWAAV 660 661 WAILIGLAMA GGGAYLVYKY RLRSYMDSEI RAIMAQYMPL DSQNEVQSHV NEGHA 715 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGGGGTTT CTAAGACTTC AAAAGCTACA ATCTTTCTAG GGTTTCTTTG GCTGAACCTG 60 61 TTTCAATCAG TAGTGGGTCG TTTCGTGGTG GAAAAAAACA GCTTAAGGGT CGTTTCACCT 120 121 GATGATATTA AAGGCACTTA CGATAGTGCA ATTGGAAACT TTGGGATTCC ACAATATGGA 180 181 GGTAGTATTC CTGGGACTGT GGTTTATCCA AAGGAAAATC GAAAGGGGTG TCGAAATTTT 240 241 GAGGATTCTG GGACTTCTTT TAAGTCTAAG TCTGGTGCTA TGCCCACTTT TGTTCTCGTC 300 301 GATCGCGGAG ATTGCTTTTT TGCTCTGAAG GTCTGGAATG CACAAAATGC GGGTGCTGCT 360 361 GCAGTTCTAG TTGCTGATGA TGTCGATGAA AGATTGATAA CCATGGACTC GCCTGAAGCA 420 421 GATGGTTCTT CTGCAAAATA CATTGAAAAC ATAACAATAC CATCTGCCCT CATTGAAAAG 480 481 AACTTTGCGG AGAAGTTGAA GAAAGCTGTA AGTGCAGGGG AAATGGTTAA TGTGAATCTT 540 541 GATTGGAGAG AAGCTGTGCC ACACCCAGAT GATCGTGTGG AGTATGAGCT CTGGACAAGT 600 601 AGCAATGATG AATGTGGCTT CAAATGTGAC ATGTTGATGA AATATGTCAA AGATTTCAAA 660 661 GGTGCAGCAC AAATTCTCGA GAAAGGTGGA TATACTCAAT TCACACCGCA TTATATTACT 720 721 TGGTATTGCC CTCAGGCATT CACTGTCAGC AAGCAATGCA AGTCTCAATG TATCAACCAT 780 781 GGAAGATATT GTGCTCCTGA TCCTGAACAA GATTTCAGCT CTGGATATGA AGGGAAGGAC 840 841 GTTGTTGTTG AGAACTTGAG GCAGTTGTGT GTTTTTAAAG TGGCCAATGA GACAAATAAG 900 901 CCATGGGTCT GGTGGGATTA TGTGACTGAT TTTCAGATTC GGTGTCCCAT GAAGGAGAAA 960 961 AAATATAACA AGGAATGTGC TGATGCTGTT ATCAAATCTT TAGGTCTTGA TTCAAGAAAG 1020 1021 ATTGAGAAGT GTATGGGAGA CCCTAATGCT GATGAGGACA ACCCCGTTCT GAAAGAAGAG 1080 1081 CAGGATGCCC AAGCAAGTTT CTTTATCTTT CCTAAACGTT TAAAACAGTT TAACTTTGTG 1140 1141 CAAACACTTA GAAAAGTAGA ATTCCTATGC AGATTGGTAA AGGAACAAGA GGAGATGTCA 1200 1201 CCATCTTACC TACTCTTGTT GTCAACAATC GACAATATCG AGGTTAGTGC ACACACTTAC 1260 1261 TCCTGTCTTC AACTGAGAAC CTTTATTCTT TCTTTCTTAA TGCTTCTTCT TTCAGGGAAA 1320 1321 TTGGAGAAGG GTGCTGTTTT GAAGGCTATT TGTGCTGGTT TTGAGGAGAC TACTGAGCCT 1380 1381 GCAGTTTGTC TGAGCGATGA TGTGGAGACA AATGAATGCC TGGATAATAA TGGTGGCTGC 1440 1441 TGGAAAGACA AGGCTGCTAA TATCACTGCC TGCAAGGACA CATTTCGTGG TAGAGTCTGT 1500 1501 GAATGTCCTG TGGTTGATGG TGTTCAGTTC AAAGGAGATG GTTATAGCTC TTGTACCGGT 1560 1561 TGTCTAGGGC CAGCAGAGTT TGTTGAGGAT TGCTCCCTCT CTAACTATTG TAGACCTGTT 1620 1621 GGTGTGAAAT ACATCATTTT ATCTCAGGAG GCTGGGTCAG CAAGTGGACG TGGGCGATGC 1680 1681 AAACTCAACA ATGGAGGCTG TTGGCATGAT ACTCGAGATG GTCACACTTT CTCTGCTTGT 1740 1741 GTGGATAACG AGGAGGGCAA GTGCACCTGT CCTCCAGGGT TTAAAGGTGA TGGTGTTAAA 1800 1801 AGCTGTGAAG ATATTGATGA ATGTAGAGAA AAGAAAGCAT GTCAATGCCC TGAATGCAGC 1860 1861 TGCAAAAATA CATGGGGCAG TTATGAGTGC AGTTGCAGTG GGGAACTACT GTACATCAGA 1920 1921 GACCATGATA CCTGCATAAG CAAGAGAGCT AGGGAAGTCA AATCGGCATG GGCTGCAGTT 1980 1981 TGGGCTATTT TGATTGGATT GGCTATGGCT GGTGGCGGCG CATATCTTGT GTACAAATAC 2040 2041 AGATTAAGGT CATACATGGA TTCAGAGATC AGGGCTATTA TGGCACAATA TATGCCTCTG 2100 2101 GACAGCCAAA ACGAAGTCCA AAGTCATGTC AACGAGGGTC ATGCTTGA 2148 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Art-1876 | Arabidopsis thaliana | 68.98 | 4e-121 | 383 |
| LLPS-Arl-1612 | Arabidopsis lyrata | 68.25 | 7e-121 | 382 |
| LLPS-Sem-1385 | Selaginella moellendorffii | 61.62 | 3e-106 | 343 |
| LLPS-Cap-3528 | Cavia porcellus | 29.63 | 5e-06 | 54.3 |