LLPS-Sol-1138
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Ensembl Gene: | Solyc06g083540.3 |
Ensembl Protein: | Solyc06g083540.3.1 |
Organism: | Solanum lycopersicum |
Taxa ID: | 4081 |
LLPS Type: | Client |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MQILQWLFKN ANDTNFNTNS SKKQVVTDEE VNSQGIVLFE ISGKKRNRAG KSANSSCCNI 60 61 LNWFNTLRRK DIAKEYFYST IRLNRLESSR RKQQLVHCMK MKKQSLTRGL SFRRNSDSAI 120 121 AKVLPVSDAV GTKNSHKEQN LSADKKEKAN GDKMKTVSKM KELIRWAAAV KSQKGGKYFS 180 181 QKVQTLRPPG ILFSFLVSCQ DCLVLGGLCN STNGPNFVLW KVDEETMEFS ELAIMPQALM 240 241 YCLFDSDEDD KFASLKCVGL GNLVYVYNEE HHKNYTACVC EFSNDFRMCS WRKLPNLPPN 300 301 AKKMDRYQKV EKPKPELPIN ENEIRITSQG LVRNYISYAT SLLQERSGKE IILKAMGQAI 360 361 SKTVAVAEII KRRIPRLHQD AAISSVSITD VWEPIEEGLL PVEQTRHVSM ISITLSTTEL 420 421 NKDSPGYQAP SDIQQTNYYN NNNNYAPRYS YQPRQQQPPP RQAQAVFNAG NEENGGYSNW 480 481 GRGGGRGGWG YRDSGYGRVR GGGGRGYGYG GGRGRMGNRP RGGNNNQA 528 |
Nucleotide CDS Sequence (FASTA) |
1 ATGCAGATCC TTCAATGGCT TTTCAAGAAT GCAAATGATA CCAATTTTAA CACCAATTCT 60 61 AGCAAGAAGC AAGTTGTTAC TGATGAGGAA GTGAACTCCC AAGGCATTGT CCTGTTTGAG 120 121 ATTTCTGGAA AAAAGAGAAA TCGAGCTGGA AAATCAGCGA ATTCGAGCTG CTGCAACATC 180 181 CTCAATTGGT TCAACACATT ACGCAGAAAA GACATTGCGA AAGAGTATTT CTACAGCACG 240 241 ATTCGTCTAA ATAGATTGGA AAGTTCGCGA AGGAAACAAC AGCTTGTACA TTGCATGAAG 300 301 ATGAAAAAAC AGAGTCTTAC TCGTGGATTA AGCTTTCGTC GAAACTCAGA TTCTGCCATA 360 361 GCCAAAGTTC TGCCAGTTAG TGATGCAGTA GGAACAAAAA ATAGCCATAA AGAGCAAAAC 420 421 CTTAGTGCAG ATAAGAAGGA AAAGGCCAAT GGAGATAAAA TGAAGACAGT TTCAAAGATG 480 481 AAGGAACTAA TAAGATGGGC TGCTGCTGTT AAATCACAAA AGGGAGGAAA ATACTTTAGT 540 541 CAAAAGGTAC AAACACTTAG ACCACCTGGG ATTTTGTTCT CATTCTTGGT ATCTTGTCAA 600 601 GATTGTTTAG TTTTAGGTGG ATTATGTAAT TCAACAAATG GACCAAATTT TGTTCTATGG 660 661 AAGGTTGATG AGGAAACAAT GGAGTTTAGT GAACTTGCTA TAATGCCTCA AGCATTGATG 720 721 TATTGTTTGT TTGATAGTGA TGAAGATGAC AAATTTGCTA GTTTGAAATG TGTTGGATTG 780 781 GGGAATCTTG TTTATGTTTA CAATGAAGAA CATCATAAGA ATTACACTGC TTGTGTTTGT 840 841 GAATTTAGTA ATGATTTTAG GATGTGTAGT TGGAGAAAGT TGCCTAATTT GCCACCAAAT 900 901 GCTAAAAAAA TGGATAGGTA CCAAAAAGTA GAGAAACCTA AGCCTGAATT ACCCATTAAC 960 961 GAGAATGAGA TCAGAATTAC TTCACAGGGA CTTGTTAGAA ACTACATCAG CTATGCTACT 1020 1021 AGTCTGCTTC AGGAGAGGAG TGGGAAAGAG ATCATTTTGA AAGCAATGGG TCAGGCAATA 1080 1081 AGCAAGACTG TAGCTGTTGC AGAGATCATT AAGAGAAGAA TTCCTCGTCT GCATCAAGAT 1140 1141 GCTGCTATCA GCTCAGTGAG CATCACAGAT GTATGGGAAC CTATTGAAGA GGGCCTATTG 1200 1201 CCTGTGGAGC AGACTCGGCA TGTCTCAATG ATTTCAATCA CCTTGTCAAC AACAGAACTG 1260 1261 AACAAGGACT CTCCAGGGTA TCAAGCACCT TCTGATATTC AGCAGACTAA TTACTACAAC 1320 1321 AATAACAACA ACTACGCCCC ACGTTATAGT TACCAGCCTC GACAGCAGCA ACCACCACCT 1380 1381 AGACAAGCAC AAGCAGTTTT CAATGCTGGT AATGAAGAAA ATGGTGGGTA CTCAAACTGG 1440 1441 GGGCGAGGTG GAGGCCGTGG TGGCTGGGGA TATCGTGATT CTGGATATGG AAGAGTCAGG 1500 1501 GGTGGAGGTG GCAGAGGTTA TGGTTATGGT GGTGGACGTG GACGGATGGG CAACCGTCCA 1560 1561 AGGGGTGGCA ATAACAACCA GGCTTAG 1587 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Sot-2272 | Solanum tuberosum | 99.25 | 2e-86 | 275 |
LLPS-Nia-0847 | Nicotiana attenuata | 90.23 | 1e-77 | 253 |
LLPS-Via-0600 | Vigna angularis | 83.75 | 6e-38 | 145 |
LLPS-Met-2040 | Medicago truncatula | 81.95 | 1e-68 | 231 |
LLPS-Phv-2155 | Phaseolus vulgaris | 81.82 | 2e-70 | 233 |
LLPS-Cus-1425 | Cucumis sativus | 81.3 | 6e-64 | 211 |
LLPS-Mae-2270 | Manihot esculenta | 81.06 | 6e-66 | 220 |
LLPS-Gor-1921 | Gossypium raimondii | 81.06 | 5e-67 | 223 |
LLPS-Coc-0403 | Corchorus capsularis | 81.06 | 3e-68 | 226 |
LLPS-Sei-2205 | Setaria italica | 80.47 | 4e-63 | 214 |
LLPS-Glm-1502 | Glycine max | 80.3 | 2e-69 | 232 |
LLPS-Art-0196 | Arabidopsis thaliana | 79.7 | 1e-66 | 229 |
LLPS-Viv-2304 | Vitis vinifera | 79.55 | 2e-67 | 224 |
LLPS-Orr-0007 | Oryza rufipogon | 79.17 | 7e-57 | 199 |
LLPS-Orm-0894 | Oryza meridionalis | 79.17 | 7e-44 | 163 |
LLPS-Orni-1051 | Oryza nivara | 79.17 | 7e-57 | 199 |
LLPS-Orb-2301 | Oryza barthii | 79.17 | 7e-57 | 199 |
LLPS-Orgl-1734 | Oryza glumaepatula | 79.17 | 7e-57 | 199 |
LLPS-Orbr-1802 | Oryza brachyantha | 78.91 | 2e-61 | 209 |
LLPS-Ors-2245 | Oryza sativa | 78.91 | 5e-61 | 209 |
LLPS-Orp-1310 | Oryza punctata | 78.91 | 5e-62 | 213 |
LLPS-Org-1846 | Oryza glaberrima | 78.91 | 4e-61 | 209 |
LLPS-Ori-1611 | Oryza indica | 78.91 | 4e-61 | 209 |
LLPS-Lep-1882 | Leersia perrieri | 78.91 | 7e-62 | 212 |
LLPS-Pot-0878 | Populus trichocarpa | 78.79 | 6e-62 | 212 |
LLPS-Arl-1833 | Arabidopsis lyrata | 78.2 | 5e-65 | 223 |
LLPS-Mua-1664 | Musa acuminata | 78.03 | 1e-64 | 218 |
LLPS-Vir-1877 | Vigna radiata | 77.89 | 6e-42 | 158 |
LLPS-Zem-2458 | Zea mays | 77.86 | 1e-61 | 212 |
LLPS-Hov-1240 | Hordeum vulgare | 77.34 | 6e-60 | 207 |
LLPS-Tra-1630 | Triticum aestivum | 77.34 | 3e-60 | 207 |
LLPS-Brd-1414 | Brachypodium distachyon | 77.34 | 6e-60 | 207 |
LLPS-Sob-1079 | Sorghum bicolor | 77.27 | 3e-61 | 211 |
LLPS-Hea-1365 | Helianthus annuus | 76.69 | 3e-63 | 215 |
LLPS-Prp-1011 | Prunus persica | 74.44 | 1e-58 | 204 |
LLPS-Brn-2303 | Brassica napus | 72.93 | 1e-58 | 204 |
LLPS-Bro-0685 | Brassica oleracea | 72.18 | 4e-58 | 203 |
LLPS-Dac-0929 | Daucus carota | 72.18 | 3e-62 | 212 |
LLPS-Php-0464 | Physcomitrella patens | 71.65 | 1e-57 | 199 |
LLPS-Amt-2337 | Amborella trichopoda | 70.87 | 6e-56 | 194 |
LLPS-Brr-0620 | Brassica rapa | 70.68 | 1e-57 | 196 |
LLPS-Sem-2221 | Selaginella moellendorffii | 68.5 | 1e-51 | 182 |
LLPS-Thc-1194 | Theobroma cacao | 67.72 | 1e-51 | 183 |
LLPS-Tru-1553 | Triticum urartu | 65.35 | 7e-50 | 180 |
LLPS-Chr-0441 | Chlamydomonas reinhardtii | 47.06 | 1e-30 | 125 |
LLPS-Gas-0987 | Galdieria sulphuraria | 45.38 | 4e-27 | 114 |
LLPS-Mod-3077 | Monodelphis domestica | 36.76 | 2e-18 | 87.8 |
LLPS-Anc-1765 | Anolis carolinensis | 36.5 | 3e-19 | 90.1 |
LLPS-Tag-2749 | Taeniopygia guttata | 36.5 | 1e-18 | 87.8 |
LLPS-Fia-2078 | Ficedula albicollis | 35.77 | 5e-17 | 84.0 |
LLPS-Meg-2703 | Meleagris gallopavo | 35.77 | 3e-17 | 84.3 |
LLPS-Lac-1435 | Latimeria chalumnae | 35.77 | 2e-16 | 82.4 |
LLPS-Anp-0885 | Anas platyrhynchos | 35.77 | 3e-17 | 84.7 |
LLPS-Gaga-0224 | Gallus gallus | 35.77 | 4e-17 | 84.3 |
LLPS-Sah-2647 | Sarcophilus harrisii | 35.45 | 3e-14 | 75.9 |
LLPS-Pes-0401 | Pelodiscus sinensis | 35.04 | 2e-16 | 82.4 |
LLPS-Leo-0626 | Lepisosteus oculatus | 34.21 | 5e-11 | 66.2 |
LLPS-Mea-0731 | Mesocricetus auratus | 34.17 | 9e-16 | 80.1 |
LLPS-Ran-2812 | Rattus norvegicus | 34.17 | 5e-16 | 80.9 |
LLPS-Ten-0479 | Tetraodon nigroviridis | 33.33 | 3e-17 | 84.7 |
LLPS-Loa-0657 | Loxodonta africana | 33.09 | 8e-17 | 83.2 |
LLPS-Aon-1422 | Aotus nancymaae | 33.09 | 5e-17 | 83.6 |
LLPS-Xet-0770 | Xenopus tropicalis | 32.85 | 1e-15 | 80.1 |
LLPS-Caf-2116 | Canis familiaris | 32.84 | 8e-16 | 80.1 |
LLPS-Dar-0221 | Danio rerio | 32.52 | 2e-13 | 75.5 |
LLPS-Tut-0178 | Tursiops truncatus | 32.48 | 4e-10 | 63.5 |
LLPS-Rhb-0502 | Rhinopithecus bieti | 32.35 | 3e-16 | 81.6 |
LLPS-Hos-0921 | Homo sapiens | 32.35 | 3e-16 | 81.6 |
LLPS-Pap-4035 | Pan paniscus | 32.35 | 3e-16 | 81.6 |
LLPS-Pat-3224 | Pan troglodytes | 32.35 | 3e-16 | 81.6 |
LLPS-Cas-2671 | Carlito syrichta | 32.35 | 2e-16 | 82.0 |
LLPS-Nol-3672 | Nomascus leucogenys | 32.35 | 3e-16 | 81.6 |
LLPS-Poa-0235 | Pongo abelii | 32.35 | 3e-16 | 81.6 |
LLPS-Cap-1842 | Cavia porcellus | 32.35 | 6e-16 | 80.5 |
LLPS-Mam-1833 | Macaca mulatta | 32.35 | 3e-16 | 81.6 |
LLPS-Gog-1191 | Gorilla gorilla | 32.35 | 3e-16 | 81.6 |
LLPS-Fud-1103 | Fukomys damarensis | 32.35 | 4e-16 | 81.3 |
LLPS-Maf-3356 | Macaca fascicularis | 32.35 | 3e-16 | 81.6 |
LLPS-Chs-1405 | Chlorocebus sabaeus | 32.35 | 3e-16 | 81.6 |
LLPS-Cea-3144 | Cercocebus atys | 32.35 | 3e-16 | 81.6 |
LLPS-Paa-2913 | Papio anubis | 32.35 | 3e-16 | 81.6 |
LLPS-Mal-0545 | Mandrillus leucophaeus | 32.35 | 3e-16 | 81.6 |
LLPS-Dio-0052 | Dipodomys ordii | 32.35 | 3e-16 | 81.3 |
LLPS-Xim-1190 | Xiphophorus maculatus | 32.31 | 9e-15 | 77.4 |
LLPS-Orn-0754 | Oreochromis niloticus | 32.23 | 9e-14 | 74.3 |
LLPS-Gaa-2560 | Gasterosteus aculeatus | 32.23 | 3e-13 | 73.2 |
LLPS-Asm-3059 | Astyanax mexicanus | 32.17 | 2e-11 | 68.2 |
LLPS-Orc-2777 | Oryctolagus cuniculus | 32.09 | 3e-15 | 78.6 |
LLPS-Fec-0384 | Felis catus | 32.09 | 1e-15 | 79.7 |
LLPS-Sus-0246 | Sus scrofa | 32.09 | 2e-15 | 79.0 |
LLPS-Aim-0037 | Ailuropoda melanoleuca | 32.09 | 1e-15 | 79.7 |
LLPS-Icp-0306 | Ictalurus punctatus | 32.0 | 1e-11 | 68.9 |
LLPS-Otg-3179 | Otolemur garnettii | 31.62 | 2e-15 | 79.0 |
LLPS-Man-0315 | Macaca nemestrina | 31.62 | 4e-15 | 78.2 |
LLPS-Ict-0866 | Ictidomys tridecemlineatus | 31.62 | 9e-15 | 77.0 |
LLPS-Mum-3133 | Mus musculus | 31.62 | 7e-16 | 80.5 |
LLPS-Bot-2383 | Bos taurus | 31.62 | 1e-09 | 62.0 |
LLPS-Tar-1103 | Takifugu rubripes | 31.41 | 2e-13 | 74.3 |
LLPS-Scm-1495 | Scophthalmus maximus | 31.4 | 3e-11 | 67.0 |
LLPS-Scf-1362 | Scleropages formosus | 31.4 | 2e-13 | 73.9 |
LLPS-Urm-3751 | Ursus maritimus | 31.34 | 7e-15 | 77.4 |
LLPS-Ora-1697 | Ornithorhynchus anatinus | 31.34 | 1e-10 | 65.1 |
LLPS-Mup-1166 | Mustela putorius furo | 31.34 | 6e-15 | 77.4 |
LLPS-Orl-1113 | Oryzias latipes | 31.29 | 2e-13 | 73.6 |
LLPS-Pof-1104 | Poecilia formosa | 30.6 | 2e-13 | 73.6 |
LLPS-Ova-1698 | Ovis aries | 30.6 | 1e-13 | 73.9 |
LLPS-Myl-2780 | Myotis lucifugus | 30.17 | 2e-08 | 58.9 |
LLPS-Caj-1476 | Callithrix jacchus | 29.66 | 8e-09 | 59.7 |
LLPS-Eqc-4226 | Equus caballus | 29.17 | 8e-11 | 65.9 |