LLPS-Sol-0823
H1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Histone H1 |
| Gene Name: | H1 |
| Ensembl Gene: | Solyc06g084020.3 |
| Ensembl Protein: | Solyc06g084020.3.1 |
| Organism: | Solanum lycopersicum |
| Taxa ID: | 4081 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | Solyc06g084020.3.1 | Solyc06g084020.3.1 |
| UniProt | O65820, O65820_SOLLC | |
| GeneBank | AJ224933 | CAA12232.1 |
| RefSeq | NM_001247056.2 | NP_001233985.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MATEEPVVAI EPVNEPMVVA EPATEENPPA ETDEPKKEKE IKAKKSSAPR KRNPPTHPSY 60 61 FEMIKEAIVT LKDKTGSSQY AITKFIEDKQ KNLPSNFRKM LLAQLKKLVA SAKPAAKPKA 120 121 VVAKPKAAVK PKAPVKAKAA VKPKAANEKP AKVARTSTRS TPSRKAAPKP AVKKAPVKSV 180 181 KSKTVKSPAK KASARKAKK 199 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGACTG AAGAGCCGGT TGTAGCAATC GAGCCTGTGA ATGAACCGAT GGTCGTAGCT 60 61 GAACCTGCGA CGGAAGAAAA TCCACCGGCG GAGACTGATG AACCAAAGAA AGAGAAGGAG 120 121 ATCAAGGCGA AAAAATCATC TGCTCCGAGG AAGAGAAATC CTCCGACTCA TCCTTCCTAC 180 181 TTTGAGATGA TTAAGGAAGC GATTGTAACA TTGAAGGATA AAACTGGATC GAGTCAGTAT 240 241 GCGATCACAA AGTTCATTGA AGATAAGCAG AAAAATCTTC CATCAAATTT CAGGAAAATG 300 301 TTGCTTGCTC AATTGAAGAA GCTTGTGGCT TCTGCTAAAC CAGCTGCAAA GCCTAAGGCA 360 361 GTTGTAGCAA AGCCGAAAGC AGCTGTAAAG CCTAAAGCCC CTGTAAAAGC TAAGGCTGCT 420 421 GTAAAGCCAA AAGCGGCTAA TGAGAAGCCA GCTAAGGTAG CAAGGACATC TACTAGGTCG 480 481 ACTCCGTCGA GGAAAGCTGC ACCGAAGCCA GCTGTGAAAA AGGCACCGGT GAAGAGTGTG 540 541 AAATCTAAGA CCGTGAAGTC GCCGGCGAAG AAAGCATCCG CCAGGAAGGC AAAGAAGTGA 600 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Nia-2019 | Nicotiana attenuata | 93.88 | 2e-25 | 104 |
| LLPS-Viv-1932 | Vitis vinifera | 76.74 | 6e-15 | 75.1 |
| LLPS-Thc-0294 | Theobroma cacao | 74.0 | 1e-18 | 84.7 |
| LLPS-Mua-2058 | Musa acuminata | 71.7 | 1e-16 | 79.7 |
| LLPS-Coc-2096 | Corchorus capsularis | 70.45 | 4e-09 | 56.6 |
| LLPS-Glm-1718 | Glycine max | 70.0 | 1e-13 | 70.1 |
| LLPS-Bro-2291 | Brassica oleracea | 69.23 | 2e-17 | 82.0 |
| LLPS-Sob-1532 | Sorghum bicolor | 68.0 | 4e-14 | 72.8 |
| LLPS-Brr-2492 | Brassica rapa | 67.39 | 3e-13 | 69.3 |
| LLPS-Prp-1820 | Prunus persica | 67.35 | 6e-16 | 77.0 |
| LLPS-Brn-0800 | Brassica napus | 67.35 | 3e-15 | 75.5 |
| LLPS-Cus-1508 | Cucumis sativus | 67.35 | 9e-16 | 77.0 |
| LLPS-Art-1872 | Arabidopsis thaliana | 66.67 | 2e-13 | 70.5 |
| LLPS-Arl-1324 | Arabidopsis lyrata | 66.67 | 2e-13 | 70.9 |
| LLPS-Dac-1091 | Daucus carota | 65.38 | 2e-14 | 72.8 |
| LLPS-Vir-0498 | Vigna radiata | 65.12 | 9e-11 | 61.6 |
| LLPS-Mae-0151 | Manihot esculenta | 64.81 | 1e-16 | 79.7 |
| LLPS-Met-0013 | Medicago truncatula | 64.81 | 3e-17 | 82.0 |
| LLPS-Phv-0956 | Phaseolus vulgaris | 64.0 | 2e-12 | 66.6 |
| LLPS-Tra-0000 | Triticum aestivum | 63.64 | 3e-16 | 78.6 |
| LLPS-Zem-2287 | Zea mays | 63.46 | 8e-14 | 71.6 |
| LLPS-Gor-0356 | Gossypium raimondii | 61.82 | 2e-17 | 81.3 |
| LLPS-Pot-0913 | Populus trichocarpa | 61.7 | 3e-11 | 63.2 |
| LLPS-Sei-1940 | Setaria italica | 61.7 | 7e-10 | 60.5 |
| LLPS-Via-1434 | Vigna angularis | 60.2 | 2e-20 | 90.9 |
| LLPS-Hov-1340 | Hordeum vulgare | 60.0 | 1e-13 | 72.0 |
| LLPS-Sot-1893 | Solanum tuberosum | 58.1 | 5e-23 | 98.2 |
| LLPS-Orp-2052 | Oryza punctata | 56.86 | 5e-09 | 58.5 |
| LLPS-Orni-1973 | Oryza nivara | 56.86 | 8e-09 | 57.8 |
| LLPS-Php-0098 | Physcomitrella patens | 56.86 | 2e-10 | 62.4 |
| LLPS-Ori-0428 | Oryza indica | 56.86 | 9e-09 | 57.8 |
| LLPS-Orgl-0105 | Oryza glumaepatula | 56.86 | 8e-09 | 57.8 |
| LLPS-Hea-2466 | Helianthus annuus | 45.37 | 9e-19 | 86.3 |