DrLLPS - Data resource of LLPS

LLPS-Sol-0489

Integrated Annotations

▼ OVERVIEW


Status:	Unreviewed
Protein Name:	Eukaryotic translation initiation factor 5A-2
Ensembl Gene:	Solyc07g005560.3
Ensembl Protein:	Solyc07g005560.3.1
Organism:	Solanum lycopersicum
Taxa ID:	4081
LLPS Type:	Others

▼ PROPERTY

——— Disorder propensity (calculated by IUPred2A)

▼ Classification

Condensates:

Condensate	Evidence	Orthologs
Nucleolus, Stress granule	Predicted from orthologs	(View)

Organism	DrLLPS ID	UniProt ID	LLPS type	Condensate	Identity	E-value	Score
Mus musculus	LLPS-Mum-1578	Q8BGY2	Client	Nucleolus	23.60	4e-50	196
Homo sapiens	LLPS-Hos-0096	Q9GZV4	Client	Nucleolus, Stress granule	59.31	2e-56	181

▼ FUNCTION

The precise role of eIF-5A in protein biosynthesis is not known but it functions by promoting the formation of the first peptide bond.

▼ CROSS REFERENCE

Database	Nucleotide ID	Protein ID
Ensembl	Solyc07g005560.3.1	Solyc07g005560.3.1
UniProt		Q9AXQ5, IF5A2_SOLLC
GeneBank	AF296084	AAG53648.1
RefSeq	NM_001247574.2	NP_001234503.1

▼ SEQUENCE

Protein Sequence (FASTA)
1 MSDEEHHFES KADAGASKTF PQQAGTIRKN GYIVIKGRPC KVVEVSTSKT GKHGHAKCHF 60 61 VAIDIFNGKK LEDIVPSSHN CDVPHVNRTD YQLIDISEDG FVSLLTESGN TKDDLRLPTD 120 121 ENLLKQVKDG FQEGKDLVVS VMSAMGEEQI NAVKDVGTKN 160
Nucleotide CDS Sequence (FASTA)
1 ATGTCGGACG AAGAACACCA TTTTGAGTCA AAGGCAGATG CTGGTGCCTC AAAAACTTTC 60 61 CCACAGCAAG CTGGAACCAT CCGTAAGAAT GGTTACATCG TTATCAAAGG CCGTCCCTGC 120 121 AAGGTTGTTG AGGTCTCCAC TTCAAAAACT GGAAAGCACG GACATGCTAA ATGTCACTTT 180 181 GTGGCAATTG ACATTTTCAA TGGAAAGAAA CTGGAAGATA TCGTTCCGTC CTCCCACAAT 240 241 TGTGATGTGC CACATGTTAA CCGTACCGAC TATCAGCTGA TTGATATCTC TGAAGATGGT 300 301 TTTGTCTCAC TTCTTACTGA AAGTGGAAAC ACCAAGGATG ACCTCAGGCT TCCCACCGAT 360 361 GAAAATCTGC TGAAGCAGGT TAAAGATGGG TTCCAGGAAG GAAAGGATCT TGTGGTGTCT 420 421 GTTATGTCTG CGATGGGCGA AGAGCAGATT AACGCCGTTA AGGATGTTGG TACCAAGAAT 480 481 TAG 483

▼ KEYWORD

ID	Family
KW-0181	Complete proteome
KW-0385	Hypusine
KW-0396	Initiation factor
KW-0648	Protein biosynthesis
KW-1185	Reference proteome

▼ GENE ONTOLOGY

ID	Classification	Description
GO:0043022	Molecular Function	Ribosome binding
GO:0003746	Molecular Function	Translation elongation factor activity
GO:0003743	Molecular Function	Translation initiation factor activity
GO:0045901	Biological Process	Positive regulation of translational elongation
GO:0045905	Biological Process	Positive regulation of translational termination
GO:0006452	Biological Process	Translational frameshifting

▼ KEGG

sly:543668

▼ ORTHOLOGY

DrLLPS ID	Organism	Identity	E-value	Score
LLPS-Nia-1448	Nicotiana attenuata	98.12	1e-113	326
LLPS-Sot-0583	Solanum tuberosum	97.5	1e-113	327
LLPS-Thc-0151	Theobroma cacao	92.5	8e-107	309
LLPS-Mae-1819	Manihot esculenta	92.5	3e-107	310
LLPS-Phv-0612	Phaseolus vulgaris	91.82	8e-105	304
LLPS-Viv-0189	Vitis vinifera	91.82	4e-105	305
LLPS-Gor-0615	Gossypium raimondii	91.82	5e-105	304
LLPS-Dac-0833	Daucus carota	91.67	4e-103	299
LLPS-Via-0619	Vigna angularis	91.25	2e-105	305
LLPS-Prp-1192	Prunus persica	91.25	5e-106	307
LLPS-Pot-1675	Populus trichocarpa	91.25	5e-105	304
LLPS-Vir-0458	Vigna radiata	91.19	6e-104	301
LLPS-Orbr-0349	Oryza brachyantha	90.68	2e-103	300
LLPS-Ori-0582	Oryza indica	90.62	2e-102	298
LLPS-Org-0763	Oryza glaberrima	90.62	2e-102	298
LLPS-Orp-0528	Oryza punctata	90.62	2e-102	298
LLPS-Ors-1819	Oryza sativa	90.62	2e-102	298
LLPS-Hea-0518	Helianthus annuus	90.57	1e-102	301
LLPS-Coc-2064	Corchorus capsularis	90.57	3e-104	303
LLPS-Tru-0251	Triticum urartu	90.51	2e-101	298
LLPS-Met-0911	Medicago truncatula	90.0	1e-103	301
LLPS-Tra-2376	Triticum aestivum	90.0	3e-102	297
LLPS-Orni-0234	Oryza nivara	90.0	3e-102	297
LLPS-Orb-0079	Oryza barthii	90.0	3e-102	297
LLPS-Glm-1820	Glycine max	90.0	1e-104	303
LLPS-Orr-1727	Oryza rufipogon	90.0	3e-102	297
LLPS-Cus-1123	Cucumis sativus	89.94	4e-103	300
LLPS-Hov-1153	Hordeum vulgare	89.38	8e-101	295
LLPS-Orgl-2067	Oryza glumaepatula	89.38	8e-101	296
LLPS-Mua-0858	Musa acuminata	88.68	9e-102	296
LLPS-Amt-1372	Amborella trichopoda	88.68	6e-102	296
LLPS-Lep-1463	Leersia perrieri	88.05	8e-100	291
LLPS-Arl-1770	Arabidopsis lyrata	87.42	4e-100	292
LLPS-Orm-1330	Oryza meridionalis	86.42	4e-99	290
LLPS-Art-2089	Arabidopsis thaliana	86.16	3e-98	287
LLPS-Brn-1308	Brassica napus	85.35	1e-93	275
LLPS-Bro-1650	Brassica oleracea	85.35	1e-93	275
LLPS-Brr-0086	Brassica rapa	85.35	2e-93	275
LLPS-Php-0046	Physcomitrella patens	85.0	2e-98	287
LLPS-Sob-0878	Sorghum bicolor	84.47	5e-97	284
LLPS-Brd-0471	Brachypodium distachyon	84.38	5e-97	284
LLPS-Zem-0168	Zea mays	84.38	2e-98	287
LLPS-Sem-0737	Selaginella moellendorffii	83.65	4e-95	279
LLPS-Sei-0510	Setaria italica	83.54	2e-95	280
LLPS-Ora-1440	Ornithorhynchus anatinus	67.47	3e-37	129
LLPS-Dos-0421	Dothistroma septosporum	63.19	1e-58	186
LLPS-Asf-0917	Aspergillus flavus	62.0	1e-63	199
LLPS-Chr-0727	Chlamydomonas reinhardtii	61.59	1e-63	199
LLPS-Gaga-1847	Gallus gallus	61.54	3e-20	86.3
LLPS-Beb-0974	Beauveria bassiana	60.26	4e-60	190
LLPS-Cogr-1645	Colletotrichum graminicola	60.14	1e-53	174
LLPS-Asg-1178	Ashbya gossypii	60.0	4e-61	192
LLPS-Fia-2742	Ficedula albicollis	59.86	1e-55	179
LLPS-Fuv-0898	Fusarium verticillioides	59.73	2e-55	178
LLPS-Fuo-0043	Fusarium oxysporum	59.73	2e-55	178
LLPS-Pyt-0074	Pyrenophora teres	59.72	4e-55	177
LLPS-Sac-1122	Saccharomyces cerevisiae	59.62	1e-61	194
LLPS-Asc-1211	Aspergillus clavatus	59.62	1e-61	194
LLPS-Nef-0466	Neosartorya fischeri	59.62	4e-61	192
LLPS-Coo-0772	Colletotrichum orbiculare	59.59	3e-55	177
LLPS-Cog-0781	Colletotrichum gloeosporioides	59.59	2e-55	178
LLPS-Mod-0752	Monodelphis domestica	59.52	6e-47	163
LLPS-Usm-0206	Ustilago maydis	59.49	5e-59	187
LLPS-Asfu-0414	Aspergillus fumigatus	59.33	2e-58	187
LLPS-Paa-0865	Papio anubis	59.31	2e-56	181
LLPS-Mal-1036	Mandrillus leucophaeus	59.31	2e-56	181
LLPS-Myl-0960	Myotis lucifugus	59.31	2e-56	181
LLPS-Aim-2616	Ailuropoda melanoleuca	59.31	2e-56	181
LLPS-Mup-1351	Mustela putorius furo	59.31	2e-56	181
LLPS-Ran-0095	Rattus norvegicus	59.31	2e-56	181
LLPS-Dio-2352	Dipodomys ordii	59.31	2e-56	181
LLPS-Bot-2908	Bos taurus	59.31	2e-56	181
LLPS-Tut-2178	Tursiops truncatus	59.31	3e-56	180
LLPS-Fud-0704	Fukomys damarensis	59.31	2e-56	181
LLPS-Caj-3982	Callithrix jacchus	59.31	2e-56	181
LLPS-Gog-3586	Gorilla gorilla	59.31	2e-56	181
LLPS-Sus-2537	Sus scrofa	59.31	2e-56	181
LLPS-Aon-1311	Aotus nancymaae	59.31	2e-56	181
LLPS-Cea-3819	Cercocebus atys	59.31	2e-56	181
LLPS-Mum-1578	Mus musculus	59.31	2e-56	181
LLPS-Maf-2347	Macaca fascicularis	59.31	2e-56	181
LLPS-Chs-3235	Chlorocebus sabaeus	59.31	2e-56	181
LLPS-Nol-0578	Nomascus leucogenys	59.31	2e-56	181
LLPS-Ict-3441	Ictidomys tridecemlineatus	59.31	2e-56	181
LLPS-Cas-3174	Carlito syrichta	59.31	2e-56	181
LLPS-Mam-0209	Macaca mulatta	59.31	2e-56	180
LLPS-Caf-3377	Canis familiaris	59.31	2e-56	181
LLPS-Poa-1166	Pongo abelii	59.31	2e-56	181
LLPS-Orc-2471	Oryctolagus cuniculus	59.31	2e-56	181
LLPS-Rhb-1145	Rhinopithecus bieti	59.31	2e-56	181
LLPS-Man-0161	Macaca nemestrina	59.31	2e-56	181
LLPS-Hos-0096	Homo sapiens	59.31	2e-56	181
LLPS-Pap-2177	Pan paniscus	59.31	2e-56	181
LLPS-Urm-2044	Ursus maritimus	59.31	5e-56	180
LLPS-Pat-2668	Pan troglodytes	59.31	2e-56	181
LLPS-Fec-0878	Felis catus	59.31	2e-56	181
LLPS-Trr-0624	Trichoderma reesei	59.06	7e-55	177
LLPS-Phn-0087	Phaeosphaeria nodorum	59.03	4e-56	180
LLPS-Pytr-0456	Pyrenophora triticirepentis	59.03	9e-55	176
LLPS-Trv-0252	Trichoderma virens	58.9	2e-53	173
LLPS-Scp-0745	Schizosaccharomyces pombe	58.71	3e-60	191
LLPS-Ova-2332	Ovis aries	58.62	3e-56	180
LLPS-Sah-0975	Sarcophilus harrisii	58.62	7e-56	179
LLPS-Anc-0175	Anolis carolinensis	58.62	8e-56	179
LLPS-Tag-1423	Taeniopygia guttata	58.62	2e-55	178
LLPS-Eqc-0457	Equus caballus	58.62	1e-55	180
LLPS-Otg-3862	Otolemur garnettii	58.62	5e-56	179
LLPS-Aso-0752	Aspergillus oryzae	58.49	3e-59	188
LLPS-Scc-1103	Schizosaccharomyces cryophilus	58.33	1e-59	189
LLPS-Loa-0589	Loxodonta africana	58.28	7e-56	179
LLPS-Crn-1367	Cryptococcus neoformans	58.23	5e-59	187
LLPS-Spr-0653	Sporisorium reilianum	58.23	5e-59	187
LLPS-Scj-1201	Schizosaccharomyces japonicus	58.06	5e-60	190
LLPS-Pes-3638	Pelodiscus sinensis	57.82	1e-55	178
LLPS-Mea-1031	Mesocricetus auratus	57.66	2e-39	136
LLPS-Abg-1153	Absidia glauca	57.52	4e-56	180
LLPS-Ast-1100	Aspergillus terreus	57.43	1e-57	183
LLPS-Blg-1072	Blumeria graminis	57.23	2e-54	176
LLPS-Ere-0409	Erinaceus europaeus	57.14	5e-55	177
LLPS-Scs-0744	Sclerotinia sclerotiorum	57.14	7e-55	177
LLPS-Cap-0288	Cavia porcellus	57.14	5e-55	177
LLPS-Dar-0238	Danio rerio	57.14	1e-58	186
LLPS-Zyt-0576	Zymoseptoria tritici	57.05	9e-53	171
LLPS-Kop-1313	Komagataella pastoris	57.05	5e-59	187
LLPS-Yal-1060	Yarrowia lipolytica	56.88	2e-58	186
LLPS-Ved-0001	Verticillium dahliae	56.76	3e-54	175
LLPS-Mel-0802	Melampsora laricipopulina	56.72	8e-47	157
LLPS-Asni-0317	Aspergillus niger	56.52	7e-58	184
LLPS-Lem-0297	Leptosphaeria maculans	56.29	3e-55	178
LLPS-Asn-0109	Aspergillus nidulans	56.05	5e-56	179
LLPS-Leo-3593	Lepisosteus oculatus	55.84	5e-57	182
LLPS-Nec-1080	Neurospora crassa	55.77	7e-52	169
LLPS-Anp-0413	Anas platyrhynchos	55.21	2e-27	104
LLPS-Scf-1129	Scleropages formosus	55.19	6e-57	182
LLPS-Asm-0582	Astyanax mexicanus	55.19	8e-56	179
LLPS-Pug-0613	Puccinia graminis	55.06	2e-51	172
LLPS-Fus-1418	Fusarium solani	55.03	2e-51	168
LLPS-Osl-1354	Ostreococcus lucimarinus	54.94	1e-58	187
LLPS-Drm-1333	Drosophila melanogaster	54.55	2e-55	178
LLPS-Xim-3721	Xiphophorus maculatus	54.14	5e-56	179
LLPS-Pof-3217	Poecilia formosa	54.14	5e-56	179
LLPS-Gas-0388	Galdieria sulphuraria	54.11	9e-51	166
LLPS-Icp-1495	Ictalurus punctatus	53.9	2e-54	176
LLPS-Put-0201	Puccinia triticina	53.57	5e-30	112
LLPS-Gaa-1954	Gasterosteus aculeatus	53.25	3e-52	170
LLPS-Orn-0573	Oreochromis niloticus	52.87	3e-55	177
LLPS-Tar-2824	Takifugu rubripes	52.23	1e-54	176
LLPS-Ten-3233	Tetraodon nigroviridis	52.23	2e-54	176
LLPS-Cae-0655	Caenorhabditis elegans	51.92	4e-45	153
LLPS-Map-0512	Magnaporthe poae	51.22	2e-49	163
LLPS-Gag-1576	Gaeumannomyces graminis	51.22	9e-49	161
LLPS-Scm-2462	Scophthalmus maximus	50.65	9e-51	166
LLPS-Mao-0293	Magnaporthe oryzae	50.63	3e-48	160
LLPS-Orl-0323	Oryzias latipes	50.31	5e-52	171
LLPS-Cym-0720	Cyanidioschyzon merolae	49.36	2e-45	152
LLPS-Miv-0104	Microbotryum violaceum	46.96	4e-49	163
LLPS-Cii-0255	Ciona intestinalis	32.65	2e-08	53.1

LLPS-Sol-0489

Protein Sequence

Nucleotide Sequence