LLPS-Sol-0318
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Ensembl Gene: | Solyc01g106220.3 |
Ensembl Protein: | Solyc01g106220.3.1 |
Organism: | Solanum lycopersicum |
Taxa ID: | 4081 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nucleolus | Predicted from orthologs | (View) |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MFVEGLEDVG WVKGNFVNGI MSMETVGSEQ SREKMKKDKK KRKAETEGPD TPSTSHISSN 60 61 PMEKKKQKRA VDKERRRVET EKKTEAQQVV VSSELKSNKS AVISPTTSGL PEFHIAVFKD 120 121 LAAADASIRE AAANSLVAEL IEVQKAYDIL ENKEVVEGQL KLEAEKDDGL NNCAPSLRYA 180 181 VRRLIRGISS SRECARQGFA LGMTVLVGAV PCIKVDALLK LIVELLEISS SMKGQDMKDC 240 241 LLGRLFAYGS IARSGRLTLE WTADKNTPYI KEFVGSLVWL AKKKLYLQEP AVSIILELVD 300 301 KLPVEVSLNH VLEAPGLKEW FESATEVGNP DALLLALAIR EKTGVDNKDF GKLLPFPYSP 360 361 SRLFSVEHLS LLSNCLKESH FCLPRTHSVW YSLVNILLPE NVQQDFDPSA ALNSTRKHKK 420 421 GRKGSSAEED IEKNLKNFCE VIIEGSLLPS SHNCKNLAFN VLLLLLPKLP TSCIYNVLSY 480 481 KVVQCLKDIL SAKDTNLFKA SQYFLREFSE WVKHDDVRRV AVIMALQKHS NGKFDCFTRS 540 541 KTVKELMAEF KTESGCMLLI QNLVDMFLDE ARASEETSDQ SQTTDDNSEI GSLEDKDSVG 600 601 TVGTPDFLKG WVVESLPNSL KHLSLDTNAR FRVQREILKF LAVQGLFSST LGTEVTSFEL 660 661 EEKFRWPKSA ISSALCRMCI EQLQLLLSNA QKGEGPQVVP SGLEANDLGA YFMRFLTTLR 720 721 NIPSVSLFRS LGDDDEKAIK KLQAMESQLS RQERSLGPGI AKNKLHSMRY LLIQLLLQVL 780 781 LRPQEFSEAA SELVICCTKA FRSSDLLASS GDDEAEGDDS PEFMDVLVDT MLSLLPQSSA 840 841 PMRTAIEQVF KCFCEDVTDD GLHRMLRVIK KDLKPARHQE TDSENEDDDD DDVLDIEEAE 900 901 ESDEAEMDET AERHAHVDDS ETVVGVEGVT SELPVASDDD SDEGLDDDAM FRLDTHLAKM 960 961 YNAKKNQAGS ETAHSQLALF KLRVLSLLEI YLHENPEKPK VVKIFSSLAH AFVNPHTTEG 1020 1021 NEQLGQRIWG ILQKKIFKAK DYPKGEVIEF PVLKSLLERN LVLAAKHFKK KKSASSLSKK 1080 1081 KLSAALNRFK MINSLAQSSI FWILKIIDTK KRPKSELEEV SCIFREKLEG YLDSKSTRMK 1140 1141 CEFLKEVFKR RPRIGYPLFG FLLEKCASAK LQFRQIEALE LVIEMLKSFV SSNPDDNSHF 1200 1201 AELGSHLAKS GCLVNVLLKN MPDKASRRAD VRKFFGKVIQ VLTDVELRAL FLKALEPDCE 1260 1261 AQLKGMFPVL NQ 1272 |
Nucleotide CDS Sequence (FASTA) |
1 ATGTTTGTAG AGGGTTTGGA AGATGTTGGT TGGGTTAAGG GAAATTTTGT TAATGGAATT 60 61 ATGAGCATGG AGACGGTTGG GTCTGAGCAA TCAAGAGAGA AAATGAAGAA AGACAAGAAA 120 121 AAAAGGAAGG CTGAAACAGA GGGACCTGAT ACCCCATCAA CCTCTCACAT TTCTAGCAAT 180 181 CCTATGGAGA AGAAGAAGCA AAAAAGAGCT GTAGACAAAG AGAGGCGCAG GGTGGAGACC 240 241 GAGAAAAAAA CCGAAGCCCA GCAAGTAGTG GTGTCCTCTG AATTGAAAAG TAATAAGAGC 300 301 GCGGTGATTT CTCCCACTAC TAGTGGATTG CCTGAGTTCC ACATTGCTGT ATTTAAGGAC 360 361 CTTGCAGCTG CCGATGCTTC TATTAGAGAA GCAGCTGCTA ATTCTTTAGT TGCTGAGTTG 420 421 ATTGAAGTTC AGAAGGCTTA TGATATTCTA GAGAACAAGG AAGTGGTTGA GGGACAGCTC 480 481 AAATTGGAAG CTGAAAAGGA TGATGGGTTG AACAACTGTG CCCCTTCGTT GAGATATGCA 540 541 GTTCGGAGGC TAATTCGGGG CATTTCTTCA TCAAGAGAGT GTGCAAGGCA AGGGTTTGCA 600 601 TTAGGCATGA CAGTGTTGGT TGGTGCTGTT CCATGCATAA AAGTGGATGC CCTGTTGAAG 660 661 CTTATTGTTG AATTATTGGA GATCTCTTCT TCCATGAAGG GTCAGGACAT GAAAGATTGC 720 721 CTATTGGGAC GCTTATTTGC TTACGGATCT ATTGCAAGAT CAGGGAGATT AACTTTGGAG 780 781 TGGACTGCTG ATAAGAACAC TCCTTATATT AAAGAATTTG TTGGTTCTCT TGTCTGGCTG 840 841 GCAAAAAAGA AGCTCTACTT ACAAGAGCCT GCTGTCTCAA TTATTTTGGA ATTGGTTGAC 900 901 AAGTTACCTG TTGAAGTTTC ATTGAACCAT GTTCTTGAAG CTCCTGGGCT TAAAGAGTGG 960 961 TTTGAAAGTG CAACGGAAGT TGGAAATCCT GATGCTTTGC TTCTTGCCCT TGCCATACGT 1020 1021 GAAAAAACTG GTGTTGATAA CAAAGATTTT GGCAAGCTTC TGCCTTTTCC TTATAGCCCC 1080 1081 AGCCGGCTTT TCAGTGTGGA ACATTTGTCC TTGCTTTCCA ATTGCTTGAA GGAATCCCAC 1140 1141 TTCTGCTTGC CACGAACTCA TAGTGTATGG TATTCCTTGG TAAATATTCT TTTACCTGAA 1200 1201 AATGTTCAAC AAGATTTTGA TCCCTCAGCA GCTTTAAATT CCACAAGGAA GCACAAAAAA 1260 1261 GGCCGCAAGG GTAGCTCAGC TGAAGAAGAT ATTGAGAAAA ATCTTAAAAA CTTTTGTGAA 1320 1321 GTTATCATTG AAGGATCACT TCTTCCATCA TCTCATAATT GCAAGAATTT GGCGTTCAAT 1380 1381 GTTTTGCTGC TTCTCCTTCC AAAATTGCCC ACATCGTGCA TCTACAACGT CCTGTCTTAC 1440 1441 AAAGTTGTCC AGTGCTTAAA GGACATACTT TCTGCGAAAG ACACTAATCT ATTCAAAGCC 1500 1501 AGTCAATACT TTTTAAGAGA ATTTTCTGAG TGGGTCAAGC ATGATGATGT TAGAAGAGTG 1560 1561 GCAGTTATTA TGGCTTTACA GAAACATAGT AATGGGAAGT TTGATTGCTT CACCAGGTCA 1620 1621 AAAACAGTTA AAGAGTTGAT GGCTGAGTTT AAAACTGAGT CTGGATGCAT GCTTCTCATT 1680 1681 CAGAACTTAG TTGACATGTT CCTGGATGAA GCTCGTGCTT CAGAGGAGAC TTCAGATCAG 1740 1741 AGTCAAACTA CAGATGACAA CTCAGAAATT GGTTCCTTAG AAGATAAGGA TTCTGTTGGA 1800 1801 ACAGTAGGAA CGCCCGATTT TTTGAAAGGA TGGGTTGTAG AGTCACTTCC AAATAGCTTG 1860 1861 AAGCATTTAT CTCTGGATAC AAATGCAAGG TTCAGGGTCC AAAGAGAAAT TCTAAAATTT 1920 1921 TTGGCAGTGC AGGGTCTATT TTCTTCGACA CTTGGAACTG AGGTGACATC TTTTGAATTG 1980 1981 GAAGAAAAAT TTAGGTGGCC AAAGTCTGCC ATTTCAAGTG CTCTTTGTAG GATGTGCATT 2040 2041 GAGCAGCTGC AGTTACTGCT ATCCAATGCT CAAAAAGGCG AAGGACCTCA AGTTGTGCCT 2100 2101 AGTGGTCTTG AAGCTAATGA TCTTGGAGCT TATTTCATGA GATTTCTTAC CACATTGCGA 2160 2161 AACATTCCTT CTGTTTCGCT GTTTAGATCC TTGGGCGACG ATGATGAAAA AGCTATCAAG 2220 2221 AAATTGCAGG CTATGGAGTC TCAGCTCTCA AGACAGGAGA GAAGCTTGGG TCCAGGTATT 2280 2281 GCCAAAAATA AGTTACATTC CATGAGGTAC CTTCTGATAC AATTGTTGCT TCAAGTCCTA 2340 2341 CTTCGCCCTC AAGAATTTTC TGAAGCCGCC TCTGAATTGG TTATTTGCTG TACCAAAGCT 2400 2401 TTTCGATCTT CTGATCTTCT TGCTTCCTCT GGAGATGATG AAGCAGAGGG AGATGATAGT 2460 2461 CCTGAATTCA TGGATGTTCT AGTGGACACT ATGCTTTCGT TGCTGCCACA ATCATCAGCA 2520 2521 CCGATGCGGA CAGCTATTGA GCAGGTTTTC AAATGTTTTT GTGAAGATGT TACGGATGAT 2580 2581 GGGTTACATC GAATGTTGCG GGTTATAAAG AAAGATCTCA AACCAGCCAG ACACCAAGAA 2640 2641 ACTGACAGTG AGAATGAAGA TGACGATGAT GACGACGTTC TTGACATTGA AGAGGCTGAG 2700 2701 GAATCTGATG AAGCAGAGAT GGATGAAACT GCGGAGAGGC ATGCACATGT GGATGACTCA 2760 2761 GAGACAGTAG TTGGTGTTGA GGGTGTTACC TCAGAACTTC CTGTAGCTTC TGATGATGAT 2820 2821 TCTGATGAGG GATTAGATGA TGATGCAATG TTCCGCCTGG ACACACATCT TGCTAAAATG 2880 2881 TACAACGCTA AGAAGAACCA GGCTGGTAGT GAAACTGCTC ATTCACAGCT TGCCCTCTTC 2940 2941 AAACTTCGTG TCCTCTCGTT GCTGGAGATT TACCTACACG AAAATCCAGA GAAGCCAAAA 3000 3001 GTAGTGAAAA TATTCTCAAG CCTAGCTCAT GCATTTGTAA ACCCTCACAC TACGGAAGGT 3060 3061 AACGAACAAC TTGGCCAGCG AATTTGGGGA ATTTTACAGA AGAAAATCTT CAAGGCAAAG 3120 3121 GACTATCCAA AAGGTGAAGT CATCGAATTC CCAGTTCTTA AGTCTCTCTT GGAAAGGAAC 3180 3181 TTGGTACTGG CAGCAAAACA TTTCAAGAAA AAGAAATCTG CCTCTAGTTT GTCAAAGAAA 3240 3241 AAGCTGTCTG CTGCCTTGAA TAGATTCAAA ATGATCAATT CTCTTGCCCA GAGTTCAATA 3300 3301 TTTTGGATTT TGAAGATTAT TGATACGAAA AAACGTCCAA AATCTGAACT TGAGGAGGTT 3360 3361 TCTTGTATAT TCAGAGAAAA ACTGGAGGGT TACTTAGATA GTAAAAGTAC TCGAATGAAG 3420 3421 TGCGAGTTTC TAAAAGAAGT CTTTAAAAGG CGACCACGGA TTGGATATCC TCTATTTGGG 3480 3481 TTCCTTTTGG AGAAATGTGC TAGTGCAAAG CTACAGTTTC GTCAAATTGA AGCTCTTGAA 3540 3541 CTGGTCATCG AGATGTTAAA ATCGTTTGTT TCTTCAAACC CTGATGACAA CAGCCATTTT 3600 3601 GCCGAGTTAG GCAGCCATCT TGCCAAGTCA GGGTGTCTTG TTAATGTGTT GTTGAAAAAT 3660 3661 ATGCCGGATA AGGCATCACG ACGAGCTGAT GTTCGTAAGT TTTTTGGAAA AGTGATTCAG 3720 3721 GTCTTAACAG ATGTTGAACT GAGGGCCTTG TTTCTTAAGG CTCTGGAACC TGATTGTGAA 3780 3781 GCTCAACTGA AGGGCATGTT TCCTGTTTTA AATCAGTGA 3819 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Sot-0308 | Solanum tuberosum | 94.47 | 0.0 | 2046 |
LLPS-Nia-1286 | Nicotiana attenuata | 79.48 | 0.0 | 1712 |
LLPS-Viv-0249 | Vitis vinifera | 69.63 | 0.0 | 1073 |
LLPS-Dac-0934 | Daucus carota | 68.88 | 0.0 | 998 |
LLPS-Glm-1608 | Glycine max | 67.92 | 0.0 | 1000 |
LLPS-Gor-1110 | Gossypium raimondii | 67.68 | 0.0 | 1045 |
LLPS-Via-1532 | Vigna angularis | 67.27 | 0.0 | 966 |
LLPS-Hea-0456 | Helianthus annuus | 66.91 | 0.0 | 999 |
LLPS-Mae-1512 | Manihot esculenta | 66.87 | 0.0 | 1037 |
LLPS-Pot-0280 | Populus trichocarpa | 66.71 | 0.0 | 989 |
LLPS-Coc-1535 | Corchorus capsularis | 66.51 | 0.0 | 1040 |
LLPS-Prp-0874 | Prunus persica | 66.35 | 0.0 | 1030 |
LLPS-Thc-0407 | Theobroma cacao | 66.07 | 0.0 | 1034 |
LLPS-Cus-1786 | Cucumis sativus | 64.73 | 0.0 | 1016 |
LLPS-Phv-0283 | Phaseolus vulgaris | 64.18 | 0.0 | 994 |
LLPS-Met-0578 | Medicago truncatula | 63.69 | 0.0 | 988 |
LLPS-Arl-0823 | Arabidopsis lyrata | 61.86 | 0.0 | 890 |
LLPS-Art-0573 | Arabidopsis thaliana | 61.47 | 0.0 | 880 |
LLPS-Brr-0419 | Brassica rapa | 60.79 | 0.0 | 884 |
LLPS-Vir-2009 | Vigna radiata | 60.75 | 4e-141 | 454 |
LLPS-Brn-0096 | Brassica napus | 59.49 | 0.0 | 882 |
LLPS-Bro-1233 | Brassica oleracea | 58.69 | 0.0 | 881 |
LLPS-Mua-0212 | Musa acuminata | 55.69 | 0.0 | 798 |
LLPS-Brd-1730 | Brachypodium distachyon | 51.87 | 0.0 | 707 |
LLPS-Sob-0073 | Sorghum bicolor | 51.54 | 0.0 | 712 |
LLPS-Tra-2990 | Triticum aestivum | 51.24 | 0.0 | 688 |
LLPS-Zem-0351 | Zea mays | 51.17 | 0.0 | 701 |
LLPS-Hov-1650 | Hordeum vulgare | 50.93 | 0.0 | 681 |
LLPS-Amt-1106 | Amborella trichopoda | 50.64 | 0.0 | 741 |
LLPS-Ors-1611 | Oryza sativa | 50.49 | 0.0 | 696 |
LLPS-Org-1828 | Oryza glaberrima | 50.49 | 0.0 | 698 |
LLPS-Orb-1859 | Oryza barthii | 50.24 | 0.0 | 691 |
LLPS-Orm-1757 | Oryza meridionalis | 50.12 | 0.0 | 685 |
LLPS-Ori-0819 | Oryza indica | 50.12 | 0.0 | 686 |
LLPS-Orgl-1160 | Oryza glumaepatula | 50.12 | 0.0 | 686 |
LLPS-Sei-1432 | Setaria italica | 50.06 | 0.0 | 688 |
LLPS-Orni-1540 | Oryza nivara | 50.0 | 0.0 | 689 |
LLPS-Orbr-0463 | Oryza brachyantha | 49.71 | 0.0 | 704 |
LLPS-Orp-1834 | Oryza punctata | 49.69 | 0.0 | 687 |
LLPS-Tru-0612 | Triticum urartu | 48.85 | 2e-142 | 466 |
LLPS-Orr-1660 | Oryza rufipogon | 47.68 | 0.0 | 653 |
LLPS-Php-1364 | Physcomitrella patens | 37.7 | 9e-117 | 403 |
LLPS-Sem-0027 | Selaginella moellendorffii | 33.91 | 3e-90 | 322 |
LLPS-Miv-0686 | Microbotryum violaceum | 30.16 | 5e-10 | 68.6 |
LLPS-Yal-0697 | Yarrowia lipolytica | 30.08 | 3e-09 | 65.9 |
LLPS-Scc-0589 | Schizosaccharomyces cryophilus | 29.92 | 5e-10 | 68.6 |
LLPS-Cii-0509 | Ciona intestinalis | 29.55 | 3e-08 | 62.8 |
LLPS-Sus-2081 | Sus scrofa | 29.35 | 1e-06 | 57.8 |
LLPS-Ova-1837 | Ovis aries | 28.86 | 2e-07 | 60.5 |
LLPS-Mel-1302 | Melampsora laricipopulina | 28.81 | 7e-07 | 58.2 |
LLPS-Bot-0058 | Bos taurus | 28.36 | 3e-07 | 59.3 |
LLPS-Pug-0927 | Puccinia graminis | 27.46 | 4e-09 | 65.9 |
LLPS-Crn-0581 | Cryptococcus neoformans | 27.17 | 8e-19 | 97.1 |
LLPS-Mup-0179 | Mustela putorius furo | 26.57 | 7e-06 | 55.1 |
LLPS-Abg-0097 | Absidia glauca | 25.59 | 2e-22 | 108 |
LLPS-Osl-0553 | Ostreococcus lucimarinus | 25.03 | 1e-30 | 135 |
LLPS-Scp-0635 | Schizosaccharomyces pombe | 25.0 | 2e-14 | 83.2 |
LLPS-Scj-0195 | Schizosaccharomyces japonicus | 24.88 | 3e-12 | 75.9 |
LLPS-Chr-1304 | Chlamydomonas reinhardtii | 24.56 | 3e-17 | 92.0 |
LLPS-Asg-0597 | Ashbya gossypii | 23.74 | 3e-07 | 59.3 |
LLPS-Aim-2672 | Ailuropoda melanoleuca | 22.75 | 2e-07 | 60.5 |
LLPS-Caf-1984 | Canis familiaris | 22.67 | 5e-10 | 68.6 |
LLPS-Usm-0821 | Ustilago maydis | 22.31 | 1e-12 | 77.0 |