LLPS-Sem-1476
Lhcb6-1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Chlorophyll a-b binding protein, chloroplastic |
| Gene Name: | Lhcb6-1, Lhcb6-2, SELMODRAFT_229479, SELMODRAFT_271833 |
| Ensembl Gene: | SELMODRAFT_229479 |
| Ensembl Protein: | EFJ09339 |
| Organism: | Selaginella moellendorffii |
| Taxa ID: | 88036 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | EFJ09339 | EFJ09339 |
| UniProt | D8SRZ1, D8SRZ1_SELML | |
| GeneBank | GL377664, GL377636 | EFJ09339.1, EFJ12937.1 |
| RefSeq | XM_002986072.1, XM_002989623.1 | XP_002986118.1, XP_002989669.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAVASTSAAS AAISQLASSS FVSGSNALLS HCPSNGARVM AMATRKISAK PASGKKSWLP 60 61 GVRGGGDLVD PEWLDGSLPG DYGFDPLGLG KDPAFLKWYR EAELIHGRWA MAAVVGIFVG 120 121 QAWSGIPWFE AGAAPGAVAP FSFGSLLGTQ LLLMGWVESK RYVDFFEPNT QAVEWATPWS 180 181 RTAVNFANST GLQGYPGGKF FDPLRLAGSM KGGDYVPDFD KLQRLQLAEI KHARLAMVAM 240 241 LIFYFEAGQG LTPLGALGL 259 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCCGTGG CAAGCACAAG CGCAGCCAGC GCCGCAATTT CGCAGCTCGC GAGCTCCTCG 60 61 TTTGTGAGCG GGAGCAACGC CCTCCTGTCG CACTGCCCCA GCAATGGAGC CCGAGTCATG 120 121 GCGATGGCCA CCAGGAAGAT ATCCGCCAAG CCGGCATCCG GCAAGAAGTC GTGGCTTCCC 180 181 GGGGTGAGAG GAGGTGGCGA CCTGGTGGAT CCCGAGTGGC TGGATGGATC GCTCCCTGGC 240 241 GACTATGGTT TTGATCCCCT TGGGCTGGGC AAGGACCCGG CCTTCCTCAA GTGGTACAGA 300 301 GAAGCGGAGC TCATCCACGG GAGGTGGGCG ATGGCGGCGG TGGTGGGCAT CTTCGTGGGT 360 361 CAGGCGTGGT CTGGAATCCC ATGGTTCGAG GCTGGTGCTG CGCCGGGTGC CGTGGCCCCC 420 421 TTCTCGTTTG GCAGCCTGCT GGGGACGCAG CTCCTGCTCA TGGGCTGGGT GGAGTCCAAG 480 481 AGGTACGTGG ATTTCTTCGA GCCCAACACG CAGGCGGTGG AGTGGGCAAC GCCCTGGTCG 540 541 CGAACGGCCG TCAACTTTGC AAACTCGACC GGGCTGCAAG GCTATCCCGG CGGCAAGTTC 600 601 TTTGATCCGC TGCGGCTAGC CGGGAGCATG AAGGGCGGGG ACTACGTTCC CGACTTTGAC 660 661 AAGCTCCAGA GGCTTCAGCT TGCCGAGATC AAGCACGCCA GACTCGCCAT GGTCGCCATG 720 721 CTTATCTTCT ACTTTGAGGC GGGACAGGGC TTGACACCTC TTGGTGCTCT TGGCTTGTAA 780 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Chloroplast thylakoid membrane | |
Cellular Component | Integral component of membrane | |
Cellular Component | Photosystem I | |
Cellular Component | Photosystem II | |
Molecular Function | Chlorophyll binding | |
Biological Process | Photosynthesis, light harvesting | |
Biological Process | Protein-chromophore linkage |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Mae-1172 | Manihot esculenta | 86.83 | 8e-128 | 370 |
| LLPS-Amt-1741 | Amborella trichopoda | 85.85 | 2e-126 | 367 |
| LLPS-Tru-2040 | Triticum urartu | 84.07 | 1e-107 | 317 |
| LLPS-Met-2155 | Medicago truncatula | 83.41 | 6e-125 | 363 |
| LLPS-Sob-0243 | Sorghum bicolor | 82.93 | 7e-121 | 352 |
| LLPS-Brd-1364 | Brachypodium distachyon | 82.93 | 9e-120 | 350 |
| LLPS-Hea-1785 | Helianthus annuus | 82.33 | 1e-126 | 370 |
| LLPS-Pot-1016 | Populus trichocarpa | 82.19 | 8e-127 | 367 |
| LLPS-Zem-1652 | Zea mays | 81.95 | 2e-119 | 349 |
| LLPS-Sot-0997 | Solanum tuberosum | 81.61 | 1e-127 | 370 |
| LLPS-Sei-1997 | Setaria italica | 81.46 | 2e-119 | 348 |
| LLPS-Php-1892 | Physcomitrella patens | 81.36 | 3e-138 | 397 |
| LLPS-Glm-0524 | Glycine max | 80.72 | 5e-129 | 373 |
| LLPS-Thc-1422 | Theobroma cacao | 80.18 | 2e-128 | 372 |
| LLPS-Cus-1669 | Cucumis sativus | 80.09 | 1e-128 | 372 |
| LLPS-Viv-2460 | Vitis vinifera | 80.0 | 9e-115 | 337 |
| LLPS-Phv-1222 | Phaseolus vulgaris | 79.65 | 8e-127 | 368 |
| LLPS-Lep-2284 | Leersia perrieri | 78.74 | 6e-115 | 350 |
| LLPS-Prp-0572 | Prunus persica | 78.54 | 4e-123 | 358 |
| LLPS-Gor-1169 | Gossypium raimondii | 78.48 | 7e-129 | 373 |
| LLPS-Bro-0426 | Brassica oleracea | 77.78 | 3e-123 | 358 |
| LLPS-Nia-1096 | Nicotiana attenuata | 77.45 | 8e-128 | 370 |
| LLPS-Coc-1928 | Corchorus capsularis | 76.13 | 3e-128 | 371 |
| LLPS-Orr-0745 | Oryza rufipogon | 75.98 | 3e-120 | 351 |
| LLPS-Org-2021 | Oryza glaberrima | 75.98 | 3e-120 | 351 |
| LLPS-Ors-1751 | Oryza sativa | 75.98 | 3e-120 | 351 |
| LLPS-Orp-1296 | Oryza punctata | 75.98 | 3e-120 | 351 |
| LLPS-Orgl-0438 | Oryza glumaepatula | 75.98 | 3e-120 | 351 |
| LLPS-Ori-1694 | Oryza indica | 75.98 | 3e-120 | 351 |
| LLPS-Orb-2260 | Oryza barthii | 75.98 | 3e-120 | 351 |
| LLPS-Orni-1103 | Oryza nivara | 75.98 | 3e-120 | 351 |
| LLPS-Art-1561 | Arabidopsis thaliana | 75.85 | 2e-124 | 362 |
| LLPS-Brr-2176 | Brassica rapa | 75.74 | 3e-123 | 358 |
| LLPS-Arl-1341 | Arabidopsis lyrata | 75.74 | 5e-125 | 363 |
| LLPS-Brn-2542 | Brassica napus | 75.74 | 2e-123 | 359 |
| LLPS-Via-1131 | Vigna angularis | 75.62 | 2e-127 | 369 |
| LLPS-Vir-1639 | Vigna radiata | 75.62 | 7e-128 | 370 |
| LLPS-Hov-1786 | Hordeum vulgare | 75.0 | 7e-113 | 333 |
| LLPS-Mua-1066 | Musa acuminata | 74.5 | 1e-74 | 231 |
| LLPS-Dac-2440 | Daucus carota | 74.38 | 2e-122 | 357 |
| LLPS-Orbr-2319 | Oryza brachyantha | 73.73 | 3e-118 | 347 |
| LLPS-Tra-2576 | Triticum aestivum | 73.31 | 9e-120 | 350 |
| LLPS-Sol-0234 | Solanum lycopersicum | 71.95 | 1e-123 | 359 |
| LLPS-Chr-1535 | Chlamydomonas reinhardtii | 40.17 | 9e-29 | 115 |
| LLPS-Orm-1511 | Oryza meridionalis | 32.65 | 9e-19 | 87.0 |