LLPS-Sem-0801
Lhcb5-1
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Chlorophyll a-b binding protein, chloroplastic |
| Gene Name: | Lhcb5-1, Lhcb5-2, SELMODRAFT_269268, SELMODRAFT_444370 |
| Ensembl Gene: | SELMODRAFT_269268 |
| Ensembl Protein: | EFJ11555 |
| Organism: | Selaginella moellendorffii |
| Taxa ID: | 88036 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ FUNCTION
| The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated. |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | EFJ11555 | EFJ11555 |
| UniProt | D8S9D6, D8S9D6_SELML | |
| GeneBank | GL377646, GL377608 | EFJ18942.1, EFJ11555.1 |
| RefSeq | XM_002980026.1, XM_002987422.1 | XP_002980072.1, XP_002987468.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MAALARPEIL GRAVVAGALP VAGRSSRSST VQALLKKKKA AKPKAKAPAP ANDELAKWYG 60 61 ESRRIYLPEG ILDRSDVPEY LTGEVPGDYG FDPFGLSKKP ADFDKYQAYE LIHARWAMLG 120 121 AAGFVIPEAF NKFGAQCGPE AVWFKTGALL LDGGTLNYFG ANIPINLVLA VLAEVILVGG 180 181 AEYYRSINNL GLDRLHPGGP FDPLGLAKDP DNFALLKVKE IKNGRLAMFA MLGFFIQAYA 240 241 TGEGPVENLT THLSDPFGNN LLSVIAGGIE K 271 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCGGCTT TGGCGAGGCC CGAGATTCTG GGACGAGCAG TGGTAGCGGG CGCCTTGCCA 60 61 GTCGCCGGAA GGAGCAGTAG ATCATCCACA GTCCAGGCAC TGCTAAAGAA GAAGAAGGCC 120 121 GCCAAGCCCA AGGCCAAAGC GCCAGCTCCA GCCAACGATG AGCTCGCGAA GTGGTATGGG 180 181 GAGTCGAGAA GGATCTATCT CCCCGAGGGA ATTCTCGATC GATCGGACGT GCCAGAGTAC 240 241 TTGACAGGAG AAGTTCCTGG AGACTATGGC TTTGATCCAT TTGGACTGAG CAAGAAGCCA 300 301 GCGGACTTCG ACAAATATCA AGCCTACGAA CTCATTCACG CTCGATGGGC GATGCTCGGC 360 361 GCTGCTGGAT TTGTTATTCC CGAGGCTTTC AACAAGTTTG GAGCACAGTG TGGCCCCGAG 420 421 GCAGTGTGGT TCAAGACTGG AGCACTGCTT CTCGACGGTG GCACGCTGAA TTACTTCGGA 480 481 GCAAACATTC CAATCAACCT CGTCCTGGCT GTTCTTGCCG AGGTGATCCT TGTTGGAGGA 540 541 GCTGAGTACT ACAGATCGAT AAACAACCTG GGATTGGACA GGCTCCACCC GGGAGGTCCA 600 601 TTCGATCCTT TGGGCCTCGC AAAGGACCCA GACAACTTCG CTCTACTCAA AGTAAAGGAG 660 661 ATTAAAAACG GGAGATTGGC AATGTTTGCA ATGCTGGGAT TTTTCATCCA AGCTTACGCG 720 721 ACTGGCGAGG GTCCCGTGGA GAACTTGACG ACTCATCTCA GTGATCCTTT CGGCAACAAT 780 781 CTGCTGTCCG TGATCGCTGG AGGAATCGAG AAATGA 816 |
▼ KEYWORD
▼ GENE ONTOLOGY
ID | Classification | Description |
Cellular Component | Chloroplast thylakoid membrane | |
Cellular Component | Integral component of membrane | |
Cellular Component | Photosystem I | |
Cellular Component | Photosystem II | |
Molecular Function | Chlorophyll binding | |
Biological Process | Photosynthesis, light harvesting | |
Biological Process | Protein-chromophore linkage |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Pot-0451 | Populus trichocarpa | 84.93 | 3e-121 | 355 |
| LLPS-Gor-0067 | Gossypium raimondii | 84.62 | 4e-122 | 357 |
| LLPS-Viv-2294 | Vitis vinifera | 84.16 | 1e-121 | 360 |
| LLPS-Mua-2364 | Musa acuminata | 83.71 | 4e-123 | 360 |
| LLPS-Glm-0759 | Glycine max | 83.71 | 1e-122 | 359 |
| LLPS-Coc-1159 | Corchorus capsularis | 83.71 | 1e-120 | 354 |
| LLPS-Nia-0428 | Nicotiana attenuata | 83.71 | 2e-121 | 355 |
| LLPS-Amt-1819 | Amborella trichopoda | 83.64 | 5e-124 | 362 |
| LLPS-Brd-0432 | Brachypodium distachyon | 83.26 | 1e-120 | 354 |
| LLPS-Dac-1825 | Daucus carota | 83.26 | 3e-118 | 354 |
| LLPS-Thc-0381 | Theobroma cacao | 83.26 | 1e-121 | 356 |
| LLPS-Sot-2073 | Solanum tuberosum | 82.81 | 1e-120 | 353 |
| LLPS-Vir-1665 | Vigna radiata | 82.35 | 2e-120 | 353 |
| LLPS-Via-2352 | Vigna angularis | 82.35 | 5e-121 | 355 |
| LLPS-Hea-1860 | Helianthus annuus | 82.11 | 3e-92 | 284 |
| LLPS-Cus-1853 | Cucumis sativus | 81.9 | 4e-120 | 352 |
| LLPS-Prp-1446 | Prunus persica | 81.9 | 2e-121 | 355 |
| LLPS-Mae-0512 | Manihot esculenta | 81.9 | 4e-120 | 352 |
| LLPS-Tra-2683 | Triticum aestivum | 81.45 | 3e-117 | 345 |
| LLPS-Brn-0475 | Brassica napus | 81.45 | 5e-117 | 344 |
| LLPS-Tru-1717 | Triticum urartu | 81.45 | 6e-116 | 344 |
| LLPS-Phv-0006 | Phaseolus vulgaris | 81.45 | 2e-121 | 355 |
| LLPS-Met-0579 | Medicago truncatula | 81.0 | 6e-119 | 349 |
| LLPS-Art-0245 | Arabidopsis thaliana | 81.0 | 5e-116 | 342 |
| LLPS-Php-0233 | Physcomitrella patens | 80.36 | 9e-118 | 347 |
| LLPS-Bro-1183 | Brassica oleracea | 73.29 | 2e-121 | 355 |
| LLPS-Arl-1097 | Arabidopsis lyrata | 72.56 | 1e-117 | 345 |
| LLPS-Hov-0228 | Hordeum vulgare | 71.95 | 4e-95 | 288 |
| LLPS-Lep-1305 | Leersia perrieri | 71.48 | 1e-120 | 353 |
| LLPS-Orm-1788 | Oryza meridionalis | 71.33 | 3e-122 | 360 |
| LLPS-Sob-0726 | Sorghum bicolor | 71.12 | 3e-120 | 352 |
| LLPS-Brr-1893 | Brassica rapa | 71.12 | 3e-116 | 342 |
| LLPS-Orp-1050 | Oryza punctata | 70.97 | 2e-122 | 358 |
| LLPS-Orgl-0893 | Oryza glumaepatula | 70.61 | 5e-122 | 357 |
| LLPS-Orni-2417 | Oryza nivara | 70.61 | 6e-122 | 357 |
| LLPS-Ori-0877 | Oryza indica | 70.61 | 6e-122 | 357 |
| LLPS-Orb-1659 | Oryza barthii | 70.61 | 6e-122 | 357 |
| LLPS-Zem-2006 | Zea mays | 70.61 | 1e-120 | 353 |
| LLPS-Org-1797 | Oryza glaberrima | 70.61 | 6e-122 | 357 |
| LLPS-Sei-1957 | Setaria italica | 70.25 | 6e-121 | 354 |
| LLPS-Orr-2118 | Oryza rufipogon | 70.25 | 2e-121 | 355 |
| LLPS-Orbr-0297 | Oryza brachyantha | 70.25 | 9e-121 | 353 |
| LLPS-Ors-2337 | Oryza sativa | 70.25 | 2e-121 | 355 |
| LLPS-Chr-1606 | Chlamydomonas reinhardtii | 52.38 | 1e-56 | 189 |
| LLPS-Sol-0466 | Solanum lycopersicum | 47.62 | 5e-49 | 169 |
| LLPS-Osl-0975 | Ostreococcus lucimarinus | 45.26 | 3e-51 | 176 |