LLPS-Sem-0313
SELMODRAFT_177656
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Nuclear pore protein |
| Gene Name: | SELMODRAFT_177656 |
| Ensembl Gene: | SELMODRAFT_177656 |
| Ensembl Protein: | EFJ19806 |
| Organism: | Selaginella moellendorffii |
| Taxa ID: | 88036 |
| LLPS Type: | Others |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nuclear pore complex, Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | EFJ19806 | EFJ19806 |
| UniProt | D8S7S4, D8S7S4_SELML | |
| GeneBank | GL377605 | EFJ19806.1 |
| RefSeq | XM_002979352.1 | XP_002979398.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 MGGSQDMRSW ADLLQNSSQL LQSAAPAAPF PPLQARNLCR SLDQLESLSR QLKARTNRYD 60 61 ATGQSIAATR LLAREGINAD QLARELKAFE LKTSFEDVFP VEATTVEEYL QQVHEMSMLT 120 121 AILNSQRDNV RSFDDYMMKS LEDDWQKEKR EFLNSLSRLP LSSGTPGKQA SRVSGVLDSS 180 181 AVKALPDMRA PNPFLSTPSQ VVNAKAAGYA EAVAKLNAAR ERSEPFKVAS TLKDTFLAFA 240 241 DEKMGTKSVN MAKIWYLLQS LLGEDFEYPS HLSRKMKMVF GARRHLEAGH EKYMLDTIQS 300 301 HAAQAALGGS TGNLQRVRAF LRVRLRDYGL LDFDATDTHR QPPIDTTWYQ IYFCLRSGYY 360 361 EEAKLVAQSS RASRSYAPLL TEWIATGGAV SSATATAAFE ECEKMARIGD RPGRAGYDKK 420 421 KMLLYAVLSG SRQQAERLLR DIPVLFTTIE DFMWFMLSIT RDCCPGPQDG LVPYTLEDLQ 480 481 NYLTKFEPSY YTKNGKDPLV YPYVLLLSLQ LQAAILYLTR EISNDGDHID GVHIAIALAD 540 541 HGVLSEGASN KAKPGTMSPV GEITSIIRHY GLSYVRQNNL ATALEYYVQA AAAIGGGAIS 600 601 WSGQNSNDQQ RQRNMMLKQL LIELLLRDGG IALLLGSNGI GSEGALRRFL PDPTMQQQML 660 661 LEAARHAQES GLYEKAIELL KRVGAFAMAL EIVTRRLSEA ICALATGRAD GEAKVAGLIL 720 721 AGNDIAETYK KQAGSGTGSS REAEQVTEQQ VSFRQLEGIV AFHKLFRLGR YPDAIAELPR 780 781 LSFLPLTPWT PEKSAEDLRS ISPPVQACVP DLLKAALICL DNVPDRDGHM RTLKAKIANF 840 841 VANTVPRNWP HDLYEQVARM L 861 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGGGGGTT CTCAGGACAT GCGCAGCTGG GCGGATCTTC TCCAGAACTC GTCGCAGCTG 60 61 CTGCAATCTG CCGCGCCGGC GGCGCCATTT CCACCGCTCC AGGCAAGAAA TCTTTGCAGG 120 121 AGCTTGGATC AGCTAGAGTC TCTCTCGCGC CAGCTTAAGG CCCGGACGAA TCGCTACGAT 180 181 GCCACTGGCC AATCTATTGC CGCTACTCGA TTACTAGCGA GAGAAGGCAT AAATGCCGAT 240 241 CAACTTGCGA GAGAGTTAAA GGCGTTTGAG CTCAAGACAA GCTTCGAAGA TGTTTTTCCT 300 301 GTGGAAGCGA CGACCGTGGA GGAGTATCTA CAGCAGGTGC ATGAAATGTC AATGCTTACA 360 361 GCGATTTTGA ATTCTCAAAG AGACAACGTT CGAAGTTTCG ATGACTACAT GATGAAGTCA 420 421 CTGGAAGATG ACTGGCAAAA AGAGAAGCGT GAGTTTTTGA ATAGCTTGAG TCGATTGCCA 480 481 CTTTCTTCTG GCACTCCCGG GAAACAAGCC AGTCGTGTTT CTGGTGTTCT CGACTCTTCT 540 541 GCGGTGAAGG CTTTGCCTGA TATGCGCGCA CCAAACCCGT TTCTATCAAC TCCGTCGCAA 600 601 GTGGTGAATG CAAAGGCTGC GGGGTACGCT GAAGCAGTTG CGAAGCTTAA TGCTGCAAGA 660 661 GAACGAAGTG AACCATTCAA GGTTGCGAGC ACTCTGAAAG ACACGTTTTT GGCGTTTGCT 720 721 GATGAGAAAA TGGGTACAAA ATCTGTGAAC ATGGCCAAAA TCTGGTATCT CCTTCAGTCT 780 781 CTTTTAGGTG AGGACTTCGA ATATCCATCT CATCTTAGTA GAAAGATGAA AATGGTTTTT 840 841 GGTGCCCGCC GCCATTTGGA AGCTGGTCAT GAAAAGTATA TGCTGGACAC AATACAAAGC 900 901 CATGCTGCTC AGGCAGCACT TGGAGGATCT ACTGGAAACT TACAACGTGT ACGAGCTTTT 960 961 TTGCGCGTCC GGCTAAGAGA TTATGGTTTG TTAGACTTCG ATGCTACTGA TACACATAGG 1020 1021 CAACCGCCAA TTGATACTAC TTGGTACCAG ATTTATTTTT GCCTCCGATC TGGTTATTAT 1080 1081 GAGGAAGCCA AACTTGTGGC GCAGTCGTCT AGAGCTAGCC GTTCGTATGC TCCACTGCTT 1140 1141 ACGGAGTGGA TCGCCACGGG AGGAGCAGTA TCTTCTGCTA CTGCAACGGC CGCCTTTGAG 1200 1201 GAATGTGAAA AAATGGCACG GATTGGGGAC AGGCCAGGTC GTGCTGGATA CGATAAGAAG 1260 1261 AAGATGCTTC TATATGCTGT TCTTTCCGGT AGCCGGCAGC AAGCTGAACG TCTTCTACGG 1320 1321 GACATTCCTG TGCTATTCAC TACGATCGAG GACTTTATGT GGTTTATGCT TTCTATTACT 1380 1381 CGGGACTGCT GTCCAGGACC CCAAGATGGA TTAGTACCTT ATACTTTGGA GGATTTGCAG 1440 1441 AACTACCTGA CCAAATTCGA GCCATCGTAC TATACTAAGA ACGGCAAAGA TCCTTTGGTC 1500 1501 TATCCTTACG TTCTGCTATT AAGCTTACAA CTCCAGGCGG CCATCCTTTA TCTTACAAGA 1560 1561 GAGATCAGCA ACGACGGGGA CCATATAGAC GGTGTGCATA TAGCCATTGC TTTGGCAGAT 1620 1621 CATGGTGTCC TTTCAGAAGG CGCGTCGAAC AAAGCAAAGC CTGGAACAAT GAGTCCGGTT 1680 1681 GGAGAAATCA CAAGCATCAT CCGACACTAT GGACTTTCAT ATGTCCGGCA AAACAACCTT 1740 1741 GCGACGGCTT TGGAGTACTA CGTTCAGGCT GCTGCTGCCA TTGGAGGTGG CGCTATTTCC 1800 1801 TGGAGCGGAC AGAACAGTAA TGATCAGCAG AGGCAAAGGA ACATGATGTT GAAGCAGCTA 1860 1861 CTCATCGAGC TTCTTCTAAG AGATGGTGGT ATTGCACTTC TGCTAGGCTC AAACGGCATC 1920 1921 GGGTCGGAAG GTGCGTTGAG AAGGTTTTTG CCCGATCCCA CTATGCAGCA GCAGATGTTA 1980 1981 CTTGAAGCTG CACGACATGC TCAAGAGTCA GGCCTTTACG AGAAGGCTAT CGAATTGCTG 2040 2041 AAACGTGTTG GAGCCTTTGC AATGGCTCTA GAAATAGTAA CTCGCAGGCT TTCTGAGGCA 2100 2101 ATCTGCGCAC TGGCCACTGG CCGTGCAGAT GGAGAGGCCA AAGTTGCAGG CCTTATCCTT 2160 2161 GCTGGGAACG ACATTGCGGA GACTTACAAA AAGCAAGCTG GAAGCGGAAC TGGAAGCTCG 2220 2221 CGAGAGGCTG AACAAGTAAC AGAGCAGCAA GTTTCCTTCC GGCAACTTGA AGGAATCGTA 2280 2281 GCGTTCCACA AACTGTTTCG CCTGGGGAGA TATCCGGACG CGATCGCTGA GCTTCCCAGG 2340 2341 CTGTCATTTC TTCCACTGAC TCCATGGACA CCGGAAAAGA GTGCCGAAGA CCTGAGAAGC 2400 2401 ATATCTCCTC CTGTTCAAGC TTGTGTGCCT GATCTTCTCA AGGCGGCTTT GATCTGCCTT 2460 2461 GATAATGTTC CCGATAGAGA TGGCCATATG CGTACTCTCA AGGCTAAGAT CGCCAACTTT 2520 2521 GTTGCAAACA CCGTGCCCAG AAATTGGCCG CACGATCTGT ACGAGCAAGT CGCTCGAATG 2580 2581 CTTTAA 2586 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Php-0656 | Physcomitrella patens | 60.96 | 0.0 | 895 |
| LLPS-Pot-2591 | Populus trichocarpa | 60.55 | 0.0 | 876 |
| LLPS-Prp-0155 | Prunus persica | 60.43 | 0.0 | 867 |
| LLPS-Mae-1278 | Manihot esculenta | 59.87 | 0.0 | 630 |
| LLPS-Coc-0685 | Corchorus capsularis | 59.68 | 0.0 | 872 |
| LLPS-Thc-1859 | Theobroma cacao | 59.54 | 0.0 | 875 |
| LLPS-Glm-1692 | Glycine max | 59.47 | 0.0 | 865 |
| LLPS-Met-1708 | Medicago truncatula | 59.33 | 0.0 | 862 |
| LLPS-Phv-1441 | Phaseolus vulgaris | 59.29 | 0.0 | 844 |
| LLPS-Gor-0945 | Gossypium raimondii | 59.26 | 0.0 | 865 |
| LLPS-Cus-0006 | Cucumis sativus | 59.11 | 0.0 | 865 |
| LLPS-Viv-1419 | Vitis vinifera | 59.1 | 0.0 | 874 |
| LLPS-Vir-0809 | Vigna radiata | 59.09 | 0.0 | 864 |
| LLPS-Via-0951 | Vigna angularis | 58.85 | 0.0 | 857 |
| LLPS-Art-0801 | Arabidopsis thaliana | 57.78 | 0.0 | 850 |
| LLPS-Amt-1401 | Amborella trichopoda | 57.77 | 0.0 | 799 |
| LLPS-Mua-1357 | Musa acuminata | 57.76 | 0.0 | 833 |
| LLPS-Dac-0360 | Daucus carota | 57.67 | 0.0 | 781 |
| LLPS-Sol-0451 | Solanum lycopersicum | 57.54 | 0.0 | 837 |
| LLPS-Arl-0121 | Arabidopsis lyrata | 57.54 | 0.0 | 842 |
| LLPS-Hea-0305 | Helianthus annuus | 57.45 | 0.0 | 830 |
| LLPS-Brr-1440 | Brassica rapa | 56.99 | 0.0 | 841 |
| LLPS-Brn-1630 | Brassica napus | 56.99 | 0.0 | 845 |
| LLPS-Tru-0429 | Triticum urartu | 56.91 | 6e-149 | 456 |
| LLPS-Bro-0487 | Brassica oleracea | 56.87 | 0.0 | 840 |
| LLPS-Orbr-0273 | Oryza brachyantha | 56.7 | 0.0 | 817 |
| LLPS-Ors-1459 | Oryza sativa | 56.58 | 0.0 | 822 |
| LLPS-Orr-1680 | Oryza rufipogon | 56.58 | 0.0 | 822 |
| LLPS-Org-1543 | Oryza glaberrima | 56.58 | 0.0 | 822 |
| LLPS-Ori-0929 | Oryza indica | 56.58 | 0.0 | 822 |
| LLPS-Orgl-0935 | Oryza glumaepatula | 56.58 | 0.0 | 825 |
| LLPS-Zem-1370 | Zea mays | 56.55 | 0.0 | 808 |
| LLPS-Orb-1758 | Oryza barthii | 56.55 | 0.0 | 820 |
| LLPS-Sob-1717 | Sorghum bicolor | 56.51 | 0.0 | 808 |
| LLPS-Sei-1049 | Setaria italica | 56.44 | 0.0 | 821 |
| LLPS-Hov-0164 | Hordeum vulgare | 55.89 | 0.0 | 816 |
| LLPS-Brd-0418 | Brachypodium distachyon | 55.85 | 0.0 | 815 |
| LLPS-Nia-2131 | Nicotiana attenuata | 55.67 | 0.0 | 722 |
| LLPS-Lep-0159 | Leersia perrieri | 55.58 | 0.0 | 796 |
| LLPS-Tra-2276 | Triticum aestivum | 55.46 | 0.0 | 807 |
| LLPS-Orp-1065 | Oryza punctata | 54.57 | 0.0 | 778 |
| LLPS-Sot-1585 | Solanum tuberosum | 54.42 | 0.0 | 757 |
| LLPS-Orni-1885 | Oryza nivara | 52.79 | 0.0 | 709 |
| LLPS-Orm-0731 | Oryza meridionalis | 51.92 | 0.0 | 712 |
| LLPS-Chr-0336 | Chlamydomonas reinhardtii | 28.08 | 9e-29 | 128 |
| LLPS-Usm-1147 | Ustilago maydis | 26.78 | 2e-18 | 94.7 |
| LLPS-Spr-0332 | Sporisorium reilianum | 26.0 | 4e-19 | 97.1 |
| LLPS-Miv-0952 | Microbotryum violaceum | 25.53 | 6e-22 | 106 |
| LLPS-Blg-0166 | Blumeria graminis | 24.44 | 8e-09 | 63.9 |
| LLPS-Mel-0549 | Melampsora laricipopulina | 24.16 | 4e-22 | 106 |
| LLPS-Scm-0361 | Scophthalmus maximus | 24.01 | 2e-09 | 65.9 |
| LLPS-Orn-1088 | Oreochromis niloticus | 24.01 | 6e-10 | 67.4 |
| LLPS-Ten-2502 | Tetraodon nigroviridis | 24.01 | 7e-11 | 70.5 |
| LLPS-Gaa-0089 | Gasterosteus aculeatus | 24.01 | 9e-11 | 70.1 |
| LLPS-Pes-1582 | Pelodiscus sinensis | 23.93 | 2e-11 | 72.0 |
| LLPS-Pof-2756 | Poecilia formosa | 23.84 | 5e-07 | 58.2 |
| LLPS-Xet-0126 | Xenopus tropicalis | 23.8 | 1e-10 | 69.7 |
| LLPS-Dar-0300 | Danio rerio | 23.71 | 2e-09 | 65.9 |
| LLPS-Leo-2202 | Lepisosteus oculatus | 23.71 | 5e-10 | 67.8 |
| LLPS-Xim-2581 | Xiphophorus maculatus | 23.71 | 7e-09 | 63.9 |
| LLPS-Pug-0308 | Puccinia graminis | 23.66 | 3e-22 | 107 |
| LLPS-Gaga-1716 | Gallus gallus | 23.65 | 3e-11 | 71.6 |
| LLPS-Fia-0290 | Ficedula albicollis | 23.58 | 6e-12 | 73.9 |
| LLPS-Tag-2819 | Taeniopygia guttata | 23.58 | 6e-12 | 73.6 |
| LLPS-Meg-1940 | Meleagris gallopavo | 23.49 | 7e-11 | 70.1 |
| LLPS-Cap-1640 | Cavia porcellus | 23.4 | 1e-10 | 69.7 |
| LLPS-Ran-0156 | Rattus norvegicus | 23.27 | 9e-11 | 70.1 |
| LLPS-Ict-1537 | Ictidomys tridecemlineatus | 23.12 | 1e-09 | 66.6 |
| LLPS-Fud-2804 | Fukomys damarensis | 23.1 | 1e-10 | 69.7 |
| LLPS-Fec-0216 | Felis catus | 23.06 | 2e-09 | 65.5 |
| LLPS-Orl-2946 | Oryzias latipes | 22.94 | 5e-09 | 64.3 |
| LLPS-Mod-0087 | Monodelphis domestica | 22.85 | 9e-11 | 70.1 |
| LLPS-Bot-1227 | Bos taurus | 22.85 | 2e-10 | 68.9 |
| LLPS-Ova-2345 | Ovis aries | 22.85 | 2e-10 | 68.9 |
| LLPS-Urm-0434 | Ursus maritimus | 22.64 | 4e-10 | 67.8 |
| LLPS-Orc-1849 | Oryctolagus cuniculus | 22.64 | 1e-10 | 69.7 |
| LLPS-Caf-1533 | Canis familiaris | 22.64 | 2e-10 | 68.9 |
| LLPS-Dio-1166 | Dipodomys ordii | 22.64 | 8e-10 | 67.0 |
| LLPS-Aim-1846 | Ailuropoda melanoleuca | 22.64 | 3e-10 | 68.2 |
| LLPS-Loa-0833 | Loxodonta africana | 22.49 | 3e-10 | 68.2 |
| LLPS-Mup-2770 | Mustela putorius furo | 22.43 | 7e-10 | 67.0 |
| LLPS-Cea-4223 | Cercocebus atys | 22.36 | 7e-11 | 70.5 |
| LLPS-Mum-0306 | Mus musculus | 22.36 | 2e-10 | 68.9 |
| LLPS-Myl-2089 | Myotis lucifugus | 22.36 | 3e-10 | 68.6 |
| LLPS-Ora-0981 | Ornithorhynchus anatinus | 22.29 | 1e-09 | 66.2 |
| LLPS-Caj-2866 | Callithrix jacchus | 22.27 | 1e-10 | 69.7 |
| LLPS-Yal-1376 | Yarrowia lipolytica | 22.26 | 1e-18 | 95.5 |
| LLPS-Put-0536 | Puccinia triticina | 22.25 | 3e-13 | 78.2 |
| LLPS-Hos-3612 | Homo sapiens | 22.22 | 4e-08 | 61.2 |
| LLPS-Pap-1879 | Pan paniscus | 22.22 | 4e-08 | 61.6 |
| LLPS-Pat-3202 | Pan troglodytes | 22.22 | 4e-08 | 61.2 |
| LLPS-Otg-3010 | Otolemur garnettii | 22.22 | 3e-09 | 65.1 |
| LLPS-Poa-4085 | Pongo abelii | 22.22 | 5e-07 | 57.8 |
| LLPS-Nol-4579 | Nomascus leucogenys | 22.22 | 4e-09 | 64.7 |
| LLPS-Sus-0147 | Sus scrofa | 22.22 | 2e-09 | 65.5 |
| LLPS-Gog-0441 | Gorilla gorilla | 22.22 | 4e-08 | 61.6 |
| LLPS-Mal-2654 | Mandrillus leucophaeus | 22.22 | 5e-10 | 67.8 |
| LLPS-Aon-4237 | Aotus nancymaae | 22.06 | 2e-10 | 68.6 |
| LLPS-Man-3833 | Macaca nemestrina | 22.01 | 1e-09 | 66.2 |
| LLPS-Rhb-2976 | Rhinopithecus bieti | 22.01 | 1e-09 | 66.2 |
| LLPS-Mam-2198 | Macaca mulatta | 22.01 | 2e-09 | 65.9 |
| LLPS-Maf-2963 | Macaca fascicularis | 22.01 | 1e-09 | 66.2 |
| LLPS-Chs-1472 | Chlorocebus sabaeus | 22.01 | 4e-09 | 64.7 |
| LLPS-Paa-3341 | Papio anubis | 22.01 | 1e-09 | 66.2 |
| LLPS-Asni-0632 | Aspergillus niger | 20.9 | 7e-07 | 57.4 |
| LLPS-Cogr-1275 | Colletotrichum graminicola | 20.82 | 3e-11 | 71.6 |
| LLPS-Scc-0630 | Schizosaccharomyces cryophilus | 20.0 | 3e-10 | 68.2 |
| LLPS-Coo-0862 | Colletotrichum orbiculare | 19.79 | 7e-11 | 70.5 |