LLPS-Scm-2106
Integrated Annotations
▼ OVERVIEW
Status: | Unreviewed |
Ensembl Gene: | ENSSMAG00000000230.1 |
Ensembl Protein: | ENSSMAP00000000384.1 |
Organism: | Scophthalmus maximus |
Taxa ID: | 52904 |
LLPS Type: | Others |
▼ Classification
Condensates:
Condensate | Evidence | Orthologs |
---|---|---|
Nuclear speckle, Postsynaptic density | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
Database | Nucleotide ID | Protein ID |
---|---|---|
Ensembl | ENSSMAT00000000390.1 | ENSSMAP00000000384.1 |
Ensembl | ENSSMAT00000000371.1 | ENSSMAP00000000366.1 |
▼ SEQUENCE
Protein Sequence (FASTA) |
---|
1 MEGVAVQNLI DFDLPSEATA LGLDAGHHGG PADIFSPEPA SSTGVLHHQP LLPEPMAPTK 60 61 HHHHHQRQEE GGDDSDATES ADSENDMDLP SHTWELRRSS SSSAHSREDG DAEALEGRNF 120 121 MKAYVEKVFH GKDDFDQEEK AHFGELCTGE TSKGREWFAK YVSAQRCHSK CVSEATFYRL 180 181 VQSFAVVLFE CFQMDDYSPA KNLMTMCFTY YYIGKSQPSP SELLDRGGPP AGMDLYFNKA 240 241 NSWLSGKKDA AERLLKNTSK PDVKGFFGGL ENKLRSSMAP KTEDEENPVD TKPKSPDSEA 300 301 PEQKKGEKVY LYGHLKQQPI WHTLRFWNAA FFDAVHCERR KRSPTTREKW CHMTQEERDD 360 361 SSKIDENIAF GQLGTFTHNM LAFGLSKKLC SDFLKKQAVI GNLNEEQYKL LSDHIEKMAA 420 421 ECWCPGCEVR RSGEHFHSCN DVQRSVQETG LD 452 |
Nucleotide CDS Sequence (FASTA) |
1 ATGGAGGGCG TAGCAGTACA GAACCTGATA GACTTTGACC TCCCCTCCGA GGCCACGGCT 60 61 CTCGGGCTGG ACGCAGGTCA CCACGGAGGC CCTGCAGACA TTTTCTCCCC AGAGCCGGCA 120 121 TCTTCCACCG GAGTCCTCCA CCACCAGCCC TTACTGCCAG AGCCGATGGC GCCGACCAAA 180 181 CACCACCACC ACCACCAGCG CCAAGAGGAA GGAGGCGACG ACAGCGACGC GACAGAGTCG 240 241 GCGGACAGCG AGAATGACAT GGACCTGCCC TCTCACACGT GGGAGCTGAG GAGGTCGTCG 300 301 TCGTCGTCCG CCCACAGTCG GGAGGACGGC GACGCCGAGG CGCTGGAGGG GAGGAACTTC 360 361 ATGAAAGCTT ACGTGGAGAA GGTGTTCCAC GGAAAGGACG ACTTTGACCA GGAAGAGAAG 420 421 GCTCATTTTG GGGAACTGTG CACCGGAGAG ACGAGCAAAG GTCGCGAGTG GTTTGCCAAA 480 481 TATGTCAGCG CACAGCGCTG CCACTCCAAG TGTGTGAGTG AAGCCACCTT CTACAGGCTG 540 541 GTGCAGTCGT TTGCAGTCGT GCTGTTTGAA TGTTTCCAGA TGGATGACTA CAGTCCAGCC 600 601 AAGAACCTCA TGACCATGTG CTTCACGTAC TACTACATCG GGAAGTCTCA GCCATCTCCG 660 661 TCGGAGCTGC TGGATCGTGG CGGTCCTCCC GCCGGTATGG ACTTGTACTT CAACAAGGCC 720 721 AACTCGTGGC TGTCGGGGAA GAAGGACGCG GCCGAGCGGC TCCTCAAAAA CACGTCCAAG 780 781 CCCGACGTGA AGGGCTTCTT CGGAGGCCTG GAGAACAAGC TCCGGAGCTC CATGGCTCCC 840 841 AAGACCGAAG ACGAGGAAAA CCCCGTTGAC ACGAAGCCCA AATCACCAGA TTCTGAGGCT 900 901 CCGGAGCAGA AGAAAGGGGA GAAGGTTTAT CTGTACGGCC ACCTGAAGCA GCAGCCCATC 960 961 TGGCACACGC TCAGATTTTG GAACGCTGCG TTCTTTGACG CCGTTCACTG TGAGAGGAGG 1020 1021 AAGAGATCGC CGACCACCAG GGAGAAGTGG TGTCACATGA CCCAGGAGGA GCGAGACGAC 1080 1081 AGCTCCAAGA TCGATGAGAA CATTGCCTTC GGTCAGCTCG GGACGTTCAC TCACAACATG 1140 1141 TTGGCGTTCG GGCTCAGTAA GAAGTTGTGT AGTGACTTCC TGAAGAAGCA GGCCGTCATC 1200 1201 GGAAACCTCA ACGAAGAACA GTACAAGCTG CTGAGTGACC ACATAGAGAA GATGGCGGCC 1260 1261 GAGTGTTGGT GTCCAGGTTG TGAAGTGCGT CGGTCTGGAG AACATTTTCA CTCATGTAAC 1320 1321 GATGTGCAGC GCTCGGTCCA GGAAACCGGC CTTGATTAG 1359 |
▼ ORTHOLOGY
DrLLPS ID | Organism | Identity | E-value | Score |
---|---|---|---|---|
LLPS-Orn-1509 | Oreochromis niloticus | 82.13 | 0.0 | 668 |
LLPS-Tar-0696 | Takifugu rubripes | 77.84 | 4e-179 | 515 |
LLPS-Pof-3204 | Poecilia formosa | 77.23 | 0.0 | 597 |
LLPS-Xim-2842 | Xiphophorus maculatus | 77.0 | 0.0 | 610 |
LLPS-Gaa-3355 | Gasterosteus aculeatus | 76.85 | 0.0 | 598 |
LLPS-Ten-0874 | Tetraodon nigroviridis | 75.85 | 9e-174 | 499 |
LLPS-Leo-1556 | Lepisosteus oculatus | 75.62 | 2e-174 | 503 |
LLPS-Orl-0087 | Oryzias latipes | 72.85 | 0.0 | 579 |
LLPS-Lac-1548 | Latimeria chalumnae | 72.7 | 8e-161 | 468 |
LLPS-Pes-3004 | Pelodiscus sinensis | 72.64 | 1e-156 | 457 |
LLPS-Dio-3533 | Dipodomys ordii | 71.83 | 3e-160 | 466 |
LLPS-Mup-4221 | Mustela putorius furo | 71.75 | 2e-153 | 449 |
LLPS-Urm-3011 | Ursus maritimus | 71.75 | 4e-159 | 463 |
LLPS-Sah-2456 | Sarcophilus harrisii | 71.43 | 2e-157 | 459 |
LLPS-Gaga-0624 | Gallus gallus | 71.43 | 8e-158 | 460 |
LLPS-Nol-1446 | Nomascus leucogenys | 71.38 | 6e-149 | 437 |
LLPS-Gog-3002 | Gorilla gorilla | 70.46 | 7e-159 | 463 |
LLPS-Aon-1783 | Aotus nancymaae | 70.46 | 4e-159 | 464 |
LLPS-Hos-3979 | Homo sapiens | 70.46 | 3e-159 | 464 |
LLPS-Pat-2055 | Pan troglodytes | 70.46 | 7e-159 | 463 |
LLPS-Pap-2908 | Pan paniscus | 70.46 | 7e-159 | 463 |
LLPS-Poa-3892 | Pongo abelii | 70.46 | 6e-159 | 463 |
LLPS-Mum-0953 | Mus musculus | 70.28 | 7e-157 | 457 |
LLPS-Ran-2204 | Rattus norvegicus | 70.28 | 1e-156 | 457 |
LLPS-Ova-3678 | Ovis aries | 70.22 | 4e-154 | 451 |
LLPS-Myl-1511 | Myotis lucifugus | 70.19 | 2e-154 | 451 |
LLPS-Caj-0247 | Callithrix jacchus | 70.15 | 1e-158 | 462 |
LLPS-Chs-4256 | Chlorocebus sabaeus | 70.15 | 2e-157 | 459 |
LLPS-Ora-2865 | Ornithorhynchus anatinus | 70.15 | 4e-157 | 458 |
LLPS-Maf-4606 | Macaca fascicularis | 70.15 | 1e-157 | 460 |
LLPS-Cea-2089 | Cercocebus atys | 70.15 | 1e-157 | 460 |
LLPS-Mal-2350 | Mandrillus leucophaeus | 70.15 | 1e-157 | 460 |
LLPS-Man-3935 | Macaca nemestrina | 70.15 | 1e-157 | 460 |
LLPS-Mam-4009 | Macaca mulatta | 70.15 | 1e-157 | 460 |
LLPS-Paa-1118 | Papio anubis | 69.85 | 1e-156 | 457 |
LLPS-Aim-1497 | Ailuropoda melanoleuca | 69.54 | 2e-153 | 449 |
LLPS-Rhb-4243 | Rhinopithecus bieti | 69.54 | 4e-154 | 451 |
LLPS-Mod-1821 | Monodelphis domestica | 69.3 | 9e-156 | 455 |
LLPS-Meg-2573 | Meleagris gallopavo | 69.23 | 2e-155 | 454 |
LLPS-Loa-0967 | Loxodonta africana | 69.23 | 5e-154 | 451 |
LLPS-Tag-1284 | Taeniopygia guttata | 69.23 | 3e-155 | 454 |
LLPS-Caf-4510 | Canis familiaris | 69.21 | 8e-155 | 452 |
LLPS-Bot-0667 | Bos taurus | 69.0 | 4e-154 | 451 |
LLPS-Cap-0721 | Cavia porcellus | 68.94 | 5e-153 | 448 |
LLPS-Fud-0665 | Fukomys damarensis | 68.92 | 7e-154 | 450 |
LLPS-Fia-0036 | Ficedula albicollis | 68.92 | 2e-154 | 452 |
LLPS-Fec-3713 | Felis catus | 68.92 | 1e-150 | 442 |
LLPS-Eqc-3438 | Equus caballus | 68.92 | 6e-155 | 453 |
LLPS-Mea-0075 | Mesocricetus auratus | 68.66 | 2e-97 | 298 |
LLPS-Sus-4315 | Sus scrofa | 68.62 | 7e-152 | 445 |
LLPS-Otg-1578 | Otolemur garnettii | 66.98 | 2e-145 | 428 |
LLPS-Xet-1406 | Xenopus tropicalis | 66.04 | 3e-147 | 434 |
LLPS-Dar-3916 | Danio rerio | 65.83 | 1e-178 | 514 |
LLPS-Asm-1684 | Astyanax mexicanus | 65.52 | 0.0 | 520 |
LLPS-Ict-4243 | Ictidomys tridecemlineatus | 65.32 | 2e-70 | 230 |
LLPS-Icp-3964 | Ictalurus punctatus | 65.07 | 2e-171 | 496 |
LLPS-Scf-1185 | Scleropages formosus | 64.51 | 0.0 | 535 |
LLPS-Orc-3510 | Oryctolagus cuniculus | 63.38 | 8e-141 | 417 |
LLPS-Cas-1551 | Carlito syrichta | 55.42 | 6e-103 | 318 |
LLPS-Drm-0470 | Drosophila melanogaster | 49.12 | 1e-07 | 58.2 |
LLPS-Anc-1326 | Anolis carolinensis | 47.23 | 1e-61 | 210 |
LLPS-Cii-1361 | Ciona intestinalis | 38.56 | 2e-59 | 203 |