LLPS-Scm-1108
SMAX5B_006998
Integrated Annotations
▼ OVERVIEW
| Status: | Unreviewed |
| Protein Name: | Putative ATP-dependent RNA helicase DDX56 |
| Gene Name: | SMAX5B_006998 |
| Ensembl Gene: | ENSSMAG00000011280.1 |
| Ensembl Protein: | ENSSMAP00000018524.1 |
| Organism: | Scophthalmus maximus |
| Taxa ID: | 52904 |
| LLPS Type: | Client |
▼ Classification
Condensates:
| Condensate | Evidence | Orthologs |
|---|---|---|
| Nucleolus | Predicted from orthologs | (View) |
▼ CROSS REFERENCE
| Database | Nucleotide ID | Protein ID |
|---|---|---|
| Ensembl | ENSSMAT00000018753.1 | ENSSMAP00000018524.1 |
| Ensembl | ENSSMAT00000018707.1 | ENSSMAP00000018478.1 |
| Ensembl | ENSSMAT00000018795.1 | ENSSMAP00000018566.1 |
| Ensembl | ENSSMAT00000018731.1 | ENSSMAP00000018501.1 |
| UniProt | A0A2U9B9T9, A0A2U9B9T9_SCOMX | |
| GeneBank | CP026246 | AWP00726.1, AWP00725.1 |
▼ SEQUENCE
| Protein Sequence (FASTA) |
|---|
1 AMADERLQFH EMGIDDRLLK AVADLGWSQP TLIQEKAIPL ALEGKDLLAR ARTGSGKTAA 60 61 YAVPVAQRIL TSKQVSSVRE QDVRALILVP TKELGRQVQA MMKQLTAYCS RDVRVADISG 120 121 KADLSAPILM EKPDVVVGTP SRVLAHLNAQ NLVLHSSLEM LVVDEADLLF SFGFEADLKN 180 181 LLCHLPKIYQ SFLMSATLSE DVQALKELLL HNPVILKLQG SQLPDSSQLQ QYSINCEEED 240 241 KFLLIYTLLK LRLVQGKTLV FVGAVERCYR LKLFLEQFGI PACVLNSELP VQSRCHIITQ 300 301 FNQGFYDYII AADEQSLADP SAAPQMSAVK GKKKKTTEGG GKAKDKEYGV SRGVDFQNVA 360 361 NVINFDFPTT VESYIHRVGR TARADNPGTA LSFISHTELG LLSEVEEALI GDKADSVLKP 420 421 YKFKMEEIEG FRYRCRDAMR SVTKQAVKEA RLKEIKQELL NSEKLKTYFE DNPRDLQLLR 480 481 HDKDLHPAVV KPHLKNIPEY LGNTHTHTHT HTHHPSIHPS IHPSLHPSIH PSIHHCPKVR 540 541 NMKGTNPLKS FKYSGGRGKK GKTVQS 566 |
| Nucleotide CDS Sequence (FASTA) |
1 ATGGCTGACG AGAGGTTGCA GTTTCACGAA ATGGGCATAG ACGACCGTCT TCTCAAGGCA 60 61 GTTGCAGATC TGGGTTGGTC CCAGCCTACC CTGATCCAAG AGAAGGCCAT CCCTTTGGCT 120 121 CTGGAGGGGA AAGACCTTCT GGCTCGAGCC CGGACGGGAT CTGGGAAGAC GGCTGCTTAT 180 181 GCTGTACCTG TCGCACAGCG CATCCTCACC TCCAAACAGA GCGTTCGTGA GCAGGACGTG 240 241 AGGGCTCTGA TCCTCGTTCC AACCAAAGAG CTGGGTCGGC AGGTGCAGGC CATGATGAAA 300 301 CAGTTGACGG CGTACTGCTC GAGGGACGTG CGAGTGGCTG ACATCTCTGG CAAGGCTGAC 360 361 CTGTCAGCGC AGAAACCCAT CTTAATGGAG AAGCCTGACG TGGTCGTGGG GACGCCATCC 420 421 CGCGTGCTGG CCCACCTCAA CGCACAAAAC TTGGTCCTGC ATTCGTCACT TGAGATGCTG 480 481 GTGGTGGACG AGGCCGACTT GCTCTTCTCT TTCGGATTCG AGGCTGACCT GAAGAACCTG 540 541 TTGTGTCATT TGCCGAAGAT CTACCAGTCG TTCCTGATGT CTGCTACTCT CAGCGAGGAC 600 601 GTTCAGGCCT TGAAGGAGCT GCTGCTACAC AATCCTGTCA TCCTGAAGCT GCAGGGCTCT 660 661 CAGCTCCCAG ACAGCAGCCA GCTGCAGCAG TACAGCATCA ACTGTGAGGA GGAGGACAAG 720 721 TTCCTGCTCA TCTACACGCT GCTGAAGCTG CGACTGGTTC AGGGAAAAAC GCTGGTGTTT 780 781 GTCGGAGCAG TGGAAAGATG TTACAGACTC AAGCTGTTCC TGGAACAGTT TGGTATTCCC 840 841 GCCTGCGTGC TCAACTCTGA GCTGCCTGTT CAGTCCAGGT GCCACATCAT CACCCAGTTC 900 901 AACCAGGGAT TTTATGACTA CATCATTGCT GCAGATGAAC AGAGTTTGGC TGATCCCTCT 960 961 GCGGCTCCAC AGATGAGTGC AGTTAAAGGG AAGAAGAAAA AGACCACAGA GGGCGGAGGA 1020 1021 AAGGCGAAGG ACAAGGAGTA TGGTGTCTCC AGAGGTGTGG ACTTCCAAAA CGTCGCCAAT 1080 1081 GTCATAAACT TCGATTTTCC CACGACGGTA GAGTCCTACA TTCATCGAGT TGGACGAACG 1140 1141 GCGAGAGCAG ACAACCCAGG CACAGCTCTG TCGTTCATCT CTCACACTGA GCTGGGTTTG 1200 1201 TTGTCGGAAG TGGAGGAGGC TCTTATAGGA GATAAAGCTG ATTCTGTTCT GAAACCTTAC 1260 1261 AAGTTTAAGA TGGAAGAGAT TGAAGGCTTC AGGTACAGGT GCAGGGACGC CATGCGTTCA 1320 1321 GTGACAAAGC AGGCAGTGAA GGAGGCCAGG CTGAAGGAGA TCAAACAGGA GCTGCTTAAT 1380 1381 TCAGAAAAAC TCAAAACATA TTTTGAGGAT AACCCCAGAG ATCTGCAGCT GCTCAGACAT 1440 1441 GACAAAGACC TCCATCCTGC TGTCGTCAAA CCCCACCTGA AGAACATACC CGAGTACCTC 1500 1501 GTTCCTGAGA CACTGAGGGA TGTGGTGAAC CCCCTGGTCA GTAGGAAGAG GAGGAGGATG 1560 1561 AAGAAGGAAA AATCTAAACC TGAAGGAGTT GTCAAGACCA GTTTCAAGAG GAACATGAAG 1620 1621 GGGACGAACC CACTGAAGAG TTTCAAATAC AGCGGCGGGA GAGGCAAGAA GGGCAAAACA 1680 1681 GTCCAATCAT AG 1692 |
▼ ORTHOLOGY
| DrLLPS ID | Organism | Identity | E-value | Score |
|---|---|---|---|---|
| LLPS-Tar-0475 | Takifugu rubripes | 81.05 | 0.0 | 894 |
| LLPS-Scf-0441 | Scleropages formosus | 80.52 | 0.0 | 814 |
| LLPS-Ten-2295 | Tetraodon nigroviridis | 80.46 | 0.0 | 870 |
| LLPS-Asm-1774 | Astyanax mexicanus | 79.56 | 0.0 | 814 |
| LLPS-Xim-3527 | Xiphophorus maculatus | 79.19 | 0.0 | 874 |
| LLPS-Orn-1609 | Oreochromis niloticus | 79.05 | 0.0 | 884 |
| LLPS-Pof-2269 | Poecilia formosa | 78.48 | 0.0 | 870 |
| LLPS-Orl-0041 | Oryzias latipes | 77.78 | 0.0 | 854 |
| LLPS-Gaa-2246 | Gasterosteus aculeatus | 77.54 | 0.0 | 536 |
| LLPS-Dar-0809 | Danio rerio | 75.44 | 0.0 | 840 |
| LLPS-Lac-0276 | Latimeria chalumnae | 75.25 | 0.0 | 740 |
| LLPS-Leo-1956 | Lepisosteus oculatus | 73.68 | 0.0 | 828 |
| LLPS-Icp-2449 | Ictalurus punctatus | 72.11 | 0.0 | 801 |
| LLPS-Ova-2007 | Ovis aries | 68.4 | 0.0 | 663 |
| LLPS-Bot-0179 | Bos taurus | 68.2 | 0.0 | 660 |
| LLPS-Xet-1346 | Xenopus tropicalis | 68.16 | 0.0 | 740 |
| LLPS-Dio-2045 | Dipodomys ordii | 68.11 | 2e-77 | 249 |
| LLPS-Cap-2297 | Cavia porcellus | 67.6 | 0.0 | 655 |
| LLPS-Cas-2646 | Carlito syrichta | 67.46 | 0.0 | 651 |
| LLPS-Ere-0224 | Erinaceus europaeus | 67.29 | 0.0 | 552 |
| LLPS-Tut-0688 | Tursiops truncatus | 67.06 | 0.0 | 550 |
| LLPS-Urm-0587 | Ursus maritimus | 66.93 | 0.0 | 650 |
| LLPS-Fec-0976 | Felis catus | 66.87 | 0.0 | 650 |
| LLPS-Myl-1152 | Myotis lucifugus | 66.87 | 0.0 | 650 |
| LLPS-Fud-2433 | Fukomys damarensis | 66.87 | 0.0 | 649 |
| LLPS-Eqc-0064 | Equus caballus | 66.8 | 0.0 | 648 |
| LLPS-Mup-1934 | Mustela putorius furo | 66.67 | 0.0 | 645 |
| LLPS-Aim-0123 | Ailuropoda melanoleuca | 66.67 | 0.0 | 647 |
| LLPS-Caf-2837 | Canis familiaris | 65.35 | 9e-176 | 512 |
| LLPS-Sah-1607 | Sarcophilus harrisii | 62.89 | 0.0 | 570 |
| LLPS-Caj-0167 | Callithrix jacchus | 62.86 | 0.0 | 661 |
| LLPS-Loa-0410 | Loxodonta africana | 62.7 | 0.0 | 658 |
| LLPS-Poa-0964 | Pongo abelii | 62.59 | 0.0 | 658 |
| LLPS-Rhb-2888 | Rhinopithecus bieti | 62.59 | 0.0 | 660 |
| LLPS-Pat-2001 | Pan troglodytes | 62.59 | 0.0 | 655 |
| LLPS-Hos-0275 | Homo sapiens | 62.59 | 0.0 | 655 |
| LLPS-Gog-1087 | Gorilla gorilla | 62.59 | 0.0 | 655 |
| LLPS-Chs-1990 | Chlorocebus sabaeus | 62.59 | 0.0 | 658 |
| LLPS-Mam-0260 | Macaca mulatta | 62.41 | 0.0 | 659 |
| LLPS-Man-0854 | Macaca nemestrina | 62.41 | 0.0 | 659 |
| LLPS-Mal-0182 | Mandrillus leucophaeus | 62.41 | 0.0 | 657 |
| LLPS-Maf-1352 | Macaca fascicularis | 62.41 | 0.0 | 659 |
| LLPS-Cea-0144 | Cercocebus atys | 62.41 | 0.0 | 659 |
| LLPS-Nol-1177 | Nomascus leucogenys | 62.23 | 0.0 | 658 |
| LLPS-Paa-3755 | Papio anubis | 62.23 | 0.0 | 656 |
| LLPS-Ict-0743 | Ictidomys tridecemlineatus | 61.92 | 0.0 | 667 |
| LLPS-Mum-1368 | Mus musculus | 61.85 | 0.0 | 646 |
| LLPS-Ran-0572 | Rattus norvegicus | 61.68 | 0.0 | 650 |
| LLPS-Orc-1187 | Oryctolagus cuniculus | 61.66 | 0.0 | 660 |
| LLPS-Mod-2192 | Monodelphis domestica | 61.63 | 0.0 | 580 |
| LLPS-Otg-1064 | Otolemur garnettii | 61.43 | 0.0 | 662 |
| LLPS-Sus-1950 | Sus scrofa | 61.19 | 0.0 | 652 |
| LLPS-Cii-0613 | Ciona intestinalis | 60.67 | 0.0 | 617 |
| LLPS-Pap-1648 | Pan paniscus | 60.0 | 0.0 | 628 |
| LLPS-Cis-0719 | Ciona savignyi | 59.61 | 0.0 | 612 |
| LLPS-Ora-1466 | Ornithorhynchus anatinus | 56.2 | 5e-129 | 390 |
| LLPS-Crn-0535 | Cryptococcus neoformans | 51.43 | 4e-86 | 286 |
| LLPS-Drm-0535 | Drosophila melanogaster | 50.89 | 3e-170 | 502 |
| LLPS-Chr-0758 | Chlamydomonas reinhardtii | 50.59 | 3e-12 | 73.9 |
| LLPS-Abg-0730 | Absidia glauca | 50.38 | 8e-168 | 509 |
| LLPS-Scj-0534 | Schizosaccharomyces japonicus | 48.72 | 2e-150 | 451 |
| LLPS-Tum-0450 | Tuber melanosporum | 48.45 | 3e-155 | 464 |
| LLPS-Pyt-0347 | Pyrenophora teres | 46.9 | 4e-146 | 442 |
| LLPS-Dos-0183 | Dothistroma septosporum | 46.84 | 1e-86 | 288 |
| LLPS-Pytr-0070 | Pyrenophora triticirepentis | 46.41 | 6e-146 | 441 |
| LLPS-Cogr-0097 | Colletotrichum graminicola | 46.32 | 1e-142 | 432 |
| LLPS-Phn-0085 | Phaeosphaeria nodorum | 46.26 | 5e-145 | 439 |
| LLPS-Aso-0824 | Aspergillus oryzae | 45.66 | 2e-150 | 453 |
| LLPS-Blg-0579 | Blumeria graminis | 45.47 | 3e-149 | 451 |
| LLPS-Gag-0242 | Gaeumannomyces graminis | 45.32 | 3e-138 | 422 |
| LLPS-Coo-0124 | Colletotrichum orbiculare | 45.26 | 5e-137 | 418 |
| LLPS-Asn-0114 | Aspergillus nidulans | 45.22 | 2e-145 | 440 |
| LLPS-Lem-0007 | Leptosphaeria maculans | 45.12 | 9e-140 | 426 |
| LLPS-Spr-1128 | Sporisorium reilianum | 44.95 | 1e-142 | 434 |
| LLPS-Asf-0157 | Aspergillus flavus | 44.92 | 2e-124 | 383 |
| LLPS-Asc-1410 | Aspergillus clavatus | 44.88 | 2e-152 | 459 |
| LLPS-Map-0167 | Magnaporthe poae | 44.84 | 2e-140 | 430 |
| LLPS-Sac-1080 | Saccharomyces cerevisiae | 44.81 | 1e-144 | 437 |
| LLPS-Trr-0675 | Trichoderma reesei | 44.8 | 2e-139 | 426 |
| LLPS-Asg-0380 | Ashbya gossypii | 44.71 | 7e-141 | 428 |
| LLPS-Fus-0086 | Fusarium solani | 44.68 | 1e-141 | 431 |
| LLPS-Asfu-1146 | Aspergillus fumigatus | 44.61 | 1e-150 | 455 |
| LLPS-Usm-0669 | Ustilago maydis | 44.52 | 1e-140 | 430 |
| LLPS-Ast-0518 | Aspergillus terreus | 44.46 | 1e-152 | 459 |
| LLPS-Nef-0447 | Neosartorya fischeri | 44.42 | 2e-150 | 453 |
| LLPS-Scp-0228 | Schizosaccharomyces pombe | 44.42 | 6e-142 | 431 |
| LLPS-Miv-0858 | Microbotryum violaceum | 44.39 | 9e-136 | 417 |
| LLPS-Beb-0277 | Beauveria bassiana | 44.36 | 1e-142 | 433 |
| LLPS-Asni-0306 | Aspergillus niger | 44.32 | 1e-141 | 430 |
| LLPS-Trv-0914 | Trichoderma virens | 44.17 | 5e-140 | 426 |
| LLPS-Yal-0761 | Yarrowia lipolytica | 44.16 | 5e-135 | 411 |
| LLPS-Via-1838 | Vigna angularis | 44.12 | 5e-125 | 387 |
| LLPS-Hea-0221 | Helianthus annuus | 44.05 | 7e-114 | 358 |
| LLPS-Nia-0642 | Nicotiana attenuata | 43.85 | 4e-126 | 390 |
| LLPS-Amt-0452 | Amborella trichopoda | 43.79 | 1e-118 | 370 |
| LLPS-Sem-1418 | Selaginella moellendorffii | 43.77 | 8e-131 | 402 |
| LLPS-Scc-0661 | Schizosaccharomyces cryophilus | 43.71 | 5e-138 | 420 |
| LLPS-Glm-0570 | Glycine max | 43.68 | 1e-126 | 392 |
| LLPS-Mua-0068 | Musa acuminata | 43.5 | 3e-113 | 357 |
| LLPS-Cus-0194 | Cucumis sativus | 43.37 | 6e-122 | 379 |
| LLPS-Kop-0892 | Komagataella pastoris | 43.3 | 6e-140 | 426 |
| LLPS-Mae-0245 | Manihot esculenta | 43.16 | 2e-120 | 375 |
| LLPS-Nec-0572 | Neurospora crassa | 43.16 | 1e-129 | 401 |
| LLPS-Fuo-0167 | Fusarium oxysporum | 43.1 | 4e-137 | 419 |
| LLPS-Php-0622 | Physcomitrella patens | 43.1 | 4e-132 | 407 |
| LLPS-Fuv-1142 | Fusarium verticillioides | 43.1 | 4e-137 | 419 |
| LLPS-Mao-1274 | Magnaporthe oryzae | 42.99 | 5e-135 | 414 |
| LLPS-Sol-0921 | Solanum lycopersicum | 42.86 | 1e-123 | 383 |
| LLPS-Cog-0799 | Colletotrichum gloeosporioides | 42.83 | 4e-121 | 376 |
| LLPS-Phv-0148 | Phaseolus vulgaris | 42.72 | 3e-95 | 306 |
| LLPS-Brr-1035 | Brassica rapa | 42.71 | 2e-105 | 336 |
| LLPS-Art-1115 | Arabidopsis thaliana | 42.66 | 1e-117 | 369 |
| LLPS-Viv-1005 | Vitis vinifera | 42.49 | 3e-108 | 342 |
| LLPS-Arl-0705 | Arabidopsis lyrata | 42.46 | 4e-117 | 368 |
| LLPS-Sot-0353 | Solanum tuberosum | 42.44 | 4e-125 | 387 |
| LLPS-Orbr-0827 | Oryza brachyantha | 42.33 | 4e-113 | 358 |
| LLPS-Vir-0617 | Vigna radiata | 42.32 | 3e-97 | 312 |
| LLPS-Thc-0570 | Theobroma cacao | 42.3 | 7e-110 | 348 |
| LLPS-Met-0949 | Medicago truncatula | 42.22 | 1e-124 | 386 |
| LLPS-Brd-0655 | Brachypodium distachyon | 42.11 | 3e-106 | 340 |
| LLPS-Zyt-0199 | Zymoseptoria tritici | 41.96 | 1e-131 | 406 |
| LLPS-Gor-1469 | Gossypium raimondii | 41.78 | 3e-110 | 349 |
| LLPS-Coc-0085 | Corchorus capsularis | 41.7 | 2e-109 | 347 |
| LLPS-Tra-1491 | Triticum aestivum | 41.6 | 3e-109 | 348 |
| LLPS-Mel-0370 | Melampsora laricipopulina | 41.56 | 4e-122 | 381 |
| LLPS-Bro-2373 | Brassica oleracea | 41.52 | 1e-103 | 332 |
| LLPS-Brn-2368 | Brassica napus | 41.52 | 1e-103 | 332 |
| LLPS-Ved-0216 | Verticillium dahliae | 41.48 | 4e-136 | 416 |
| LLPS-Put-0315 | Puccinia triticina | 41.35 | 6e-122 | 381 |
| LLPS-Pug-0506 | Puccinia graminis | 41.32 | 1e-122 | 383 |
| LLPS-Prp-0729 | Prunus persica | 41.31 | 5e-118 | 369 |
| LLPS-Hov-1228 | Hordeum vulgare | 41.2 | 1e-107 | 344 |
| LLPS-Pot-1449 | Populus trichocarpa | 41.16 | 2e-122 | 381 |
| LLPS-Dac-0988 | Daucus carota | 41.02 | 1e-111 | 352 |
| LLPS-Ori-1181 | Oryza indica | 41.02 | 7e-114 | 360 |
| LLPS-Orni-1845 | Oryza nivara | 40.98 | 1e-111 | 354 |
| LLPS-Orb-1292 | Oryza barthii | 40.98 | 8e-113 | 357 |
| LLPS-Org-1156 | Oryza glaberrima | 40.82 | 4e-114 | 361 |
| LLPS-Ors-0913 | Oryza sativa | 40.82 | 2e-113 | 359 |
| LLPS-Sei-0793 | Setaria italica | 40.82 | 1e-110 | 350 |
| LLPS-Orr-0655 | Oryza rufipogon | 40.78 | 2e-111 | 353 |
| LLPS-Lep-1185 | Leersia perrieri | 40.67 | 1e-110 | 352 |
| LLPS-Orp-0390 | Oryza punctata | 40.59 | 7e-111 | 352 |
| LLPS-Orgl-1215 | Oryza glumaepatula | 40.59 | 2e-110 | 351 |
| LLPS-Sob-0974 | Sorghum bicolor | 40.3 | 5e-108 | 344 |
| LLPS-Tru-0225 | Triticum urartu | 40.23 | 6e-103 | 332 |
| LLPS-Cae-0948 | Caenorhabditis elegans | 40.04 | 5e-116 | 365 |
| LLPS-Chc-0379 | Chondrus crispus | 38.46 | 3e-106 | 342 |
| LLPS-Orm-0090 | Oryza meridionalis | 38.04 | 7e-96 | 312 |
| LLPS-Gas-0983 | Galdieria sulphuraria | 37.65 | 2e-91 | 297 |
| LLPS-Zem-1643 | Zea mays | 37.61 | 1e-93 | 307 |
| LLPS-Osl-1004 | Ostreococcus lucimarinus | 37.1 | 6e-101 | 324 |
| LLPS-Cym-0208 | Cyanidioschyzon merolae | 33.08 | 2e-75 | 256 |
| LLPS-Mea-1318 | Mesocricetus auratus | 32.21 | 2e-53 | 194 |
| LLPS-Tag-2111 | Taeniopygia guttata | 32.11 | 1e-53 | 194 |
| LLPS-Anc-2099 | Anolis carolinensis | 32.11 | 3e-53 | 193 |
| LLPS-Pes-3472 | Pelodiscus sinensis | 31.88 | 3e-53 | 194 |
| LLPS-Gaga-3415 | Gallus gallus | 31.72 | 7e-53 | 192 |